Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120341.Seq
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p pro...    97   3e-20
AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA ...    97   3e-20
AY058308-1|AAL13537.1|  828|Drosophila melanogaster GH07092p pro...    31   1.3  
AE014296-1712|AAF50221.1|  889|Drosophila melanogaster CG6761-PA...    31   1.3  

>AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p
           protein.
          Length = 478

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 45/85 (52%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 VHWMQDKLKEVGATTELRDVGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQP 432
           V W  D+L+ +GA TEL DVG QT+ +G+ +            DP K TV +YGHLDVQP
Sbjct: 49  VEWTADRLRSLGAETELADVGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQP 108

Query: 433 ALKSDGWETEPFELVERNEKLYGRG 507
           ALK DGW T PFEL E + KL+GRG
Sbjct: 109 ALKEDGWNTNPFELTEVDGKLFGRG 133



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +3

Query: 510 TDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECMEESGSEGL 638
           +DDKGPVL W+H I AY+     LPVN+KF+FE MEESGSEGL
Sbjct: 135 SDDKGPVLCWIHAIEAYQKLNIALPVNVKFVFEGMEESGSEGL 177



 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = +2

Query: 635 LDSLLMDKLKPEGFFDSVDYVCISDNYWLGTTKPCITYGLRGIA 766
           LD LL+++   + F   VD+VCISDNYWLG  +PC+TYGLRG+A
Sbjct: 177 LDDLLLER--KDNFLADVDFVCISDNYWLGKKRPCLTYGLRGLA 218


>AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA
           protein.
          Length = 478

 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 45/85 (52%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 VHWMQDKLKEVGATTELRDVGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQP 432
           V W  D+L+ +GA TEL DVG QT+ +G+ +            DP K TV +YGHLDVQP
Sbjct: 49  VEWTADRLRSLGAETELADVGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQP 108

Query: 433 ALKSDGWETEPFELVERNEKLYGRG 507
           ALK DGW T PFEL E + KL+GRG
Sbjct: 109 ALKEDGWNTNPFELTEVDGKLFGRG 133



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +3

Query: 510 TDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECMEESGSEGL 638
           +DDKGPVL W+H I AY+     LPVN+KF+FE MEESGSEGL
Sbjct: 135 SDDKGPVLCWIHAIEAYQKLNIALPVNVKFVFEGMEESGSEGL 177



 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = +2

Query: 635 LDSLLMDKLKPEGFFDSVDYVCISDNYWLGTTKPCITYGLRGIA 766
           LD LL+++   + F   VD+VCISDNYWLG  +PC+TYGLRG+A
Sbjct: 177 LDDLLLER--KDNFLADVDFVCISDNYWLGKKRPCLTYGLRGLA 218


>AY058308-1|AAL13537.1|  828|Drosophila melanogaster GH07092p
           protein.
          Length = 828

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -2

Query: 360 NWRQLNVFAIYCLKANIP*LCSSSDFLQFVLHPVNLRMQSARYFTSHETDGMATAS 193
           +W+ +++    C +  +P LC  S   +   H V+ RM+ +RY     TD   T++
Sbjct: 609 SWQGISLTPQRCRQGLLPQLCMDSVLKRVTNHRVSRRMRGSRYQMDTSTDSETTST 664


>AE014296-1712|AAF50221.1|  889|Drosophila melanogaster CG6761-PA
           protein.
          Length = 889

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -2

Query: 360 NWRQLNVFAIYCLKANIP*LCSSSDFLQFVLHPVNLRMQSARYFTSHETDGMATAS 193
           +W+ +++    C +  +P LC  S   +   H V+ RM+ +RY     TD   T++
Sbjct: 670 SWQGISLTPQRCRQGLLPQLCMDSVLKRVTNHRVSRRMRGSRYQMDTSTDSETTST 725


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,001,046
Number of Sequences: 53049
Number of extensions: 775167
Number of successful extensions: 1810
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)