Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120333.Seq
         (665 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOA...    31   0.69 
At2g37280.1 68415.m04573 ABC transporter family protein similar ...    31   0.91 
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik...    30   1.2  
At5g55360.1 68418.m06898 long-chain-alcohol O-fatty-acyltransfer...    29   3.7  
At5g47690.1 68418.m05887 expressed protein                             28   4.9  
At5g10020.1 68418.m01161 leucine-rich repeat transmembrane prote...    28   4.9  
At3g44170.1 68416.m04735 hypothetical protein                          28   4.9  
At4g11420.1 68417.m01840 eukaryotic translation initiation facto...    28   6.4  
At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative ...    28   6.4  
At1g50180.1 68414.m05627 disease resistance protein (CC-NBS-LRR ...    27   8.5  

>At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related  similar to wax
           synthase [gi:5020219] from Simmondsia chinensis
          Length = 341

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -1

Query: 107 WSSPLSTLSRFGWLSSLLESPILRLVAMLPTC 12
           W S L +LS   ++SS L   +LRL+++LP C
Sbjct: 12  WISALISLSYCYYISSKLSKGVLRLLSILPVC 43


>At2g37280.1 68415.m04573 ABC transporter family protein similar to
            PDR5-like ABC transporter GI:1514643 from [Spirodela
            polyrhiza]
          Length = 1413

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 524  FFSIQYGDIHKQNNIFG 574
            FFS QYGDIH++ N FG
Sbjct: 1347 FFSSQYGDIHQKINAFG 1363


>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like ABC
            transporter, Spirodela polyrrhiza, EMBL:Z70524
          Length = 1450

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 524  FFSIQYGDIHKQNNIFG 574
            F S QYGDIH++ N+FG
Sbjct: 1384 FISSQYGDIHEEINVFG 1400


>At5g55360.1 68418.m06898 long-chain-alcohol O-fatty-acyltransferase
           family protein / wax synthase family protein contains
           similarity to wax synthase similarity to wax synthase
           wax synthase - Simmondsia chinensis, PID:g5020219
           similar to wax synthase [gi:5020219] from Simmondsia
           chinensis
          Length = 342

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = -1

Query: 107 WSSPLSTLSRFGWLSSLLESPILRLVAMLPTCAV 6
           W S + ++S   +LS+ +++ + RL+++LP CA+
Sbjct: 12  WISAIISISYCYYLSTGIKAGVFRLLSVLPVCAL 45


>At5g47690.1 68418.m05887 expressed protein
          Length = 1638

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 34   KRKIGDSSSDDNQPKRERVESGEDQQLVPYN-NNNGAAFNVKHDE 165
            KR +GD++S  + PKR R  SG      PY  +N+G    +K  E
Sbjct: 1227 KRNVGDATSVVSVPKRRRSSSGHS----PYKFSNSGPKVQLKASE 1267


>At5g10020.1 68418.m01161 leucine-rich repeat transmembrane protein
           kinase, putative receptor-like protein kinase ERECTA,
           Arabidopsis thaliana, EMBL:AC004484
          Length = 1048

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -2

Query: 427 VLPLAGSNTTIFLSGSGYNLSSHSCKLFKLASRQNSFFKNLPS--KQLQFSIEKLPRFTL 254
           VL L+ +N    LSGS  N +S   +L  L+ R NS   +LPS     QFS+  L     
Sbjct: 368 VLDLSSNN----LSGSLPNFTSAFSRLSVLSIRNNSVSGSLPSLWGDSQFSVIDLSSNKF 423

Query: 253 SPFAPAT 233
           S F P +
Sbjct: 424 SGFIPVS 430


>At3g44170.1 68416.m04735 hypothetical protein
          Length = 155

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 491 NHKTCQSNFGQFFSIQYGDIHKQNNIFGNILQRHLQSDFPLKMEPNVCIHL 643
           NHKT  +NF  F  +Q  ++  + N      ++  +S+F  K+ PN  + +
Sbjct: 4   NHKTLVTNFVIFLLVQISNLSLEVNSLSAYNKKDYRSEF--KVRPNTVVRM 52


>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
           subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
           eukaryotic translation initiation factor 3 subunit 10
           (eIF-3 theta) (Eukaryotic translation initiation factor
           3 large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
           SWISS-PROT:Q9LD55
          Length = 987

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -2

Query: 361 HSCKLFKLASRQNSFFKNLPSKQLQF--SIEKLPRFTLSPFAPATTS 227
           H+   FKL S Q +F KNL  K LQ   S   L   ++ PF  A ++
Sbjct: 293 HAYAWFKLFSLQKNFNKNLSQKDLQLIASSVVLAALSIPPFDRAQSA 339


>At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative
           similar to DNA-binding protein DF1 [Pisum sativum]
           GI:13646986
          Length = 603

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 61  DDNQPKRERVESGEDQQLVPYNNNNGAAFN 150
           D+++ +    E G + +LVP NNNN    N
Sbjct: 572 DEDEEEENEEEEGGEFELVPSNNNNNKTTN 601


>At1g50180.1 68414.m05627 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 857

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 261 KRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEW 362
           K  N  IL    FEG F+ ++ C   NL +L EW
Sbjct: 753 KLPNLKILQL--FEGSFVGSKLCCSKNLENLEEW 784


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,613,582
Number of Sequences: 28952
Number of extensions: 349154
Number of successful extensions: 1048
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)