Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120332.Seq
(765 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 159 5e-40
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 131 1e-31
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 85 8e-18
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 65 9e-12
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 45 1e-05
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 44 2e-05
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 43 6e-05
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 39 9e-04
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 38 0.002
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 36 0.006
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 36 0.006
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 34 0.019
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 34 0.026
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 32 0.10
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 31 0.14
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 29 0.55
SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|... 29 0.96
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 28 1.3
SPAC29B12.11c |||human WW domain binding protein-2 ortholog|Schi... 27 2.2
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 27 2.9
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 27 3.9
SPAC23H4.07c |srp102||signal recognition particle receptor beta ... 26 5.1
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 25 9.0
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 159 bits (385), Expect = 5e-40
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = +2
Query: 257 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELA 436
IGFNVETVEY+NISFTVWDVGGQDKIRPLWRHY+QNTQG+IFVVDS+DR+RI+EA EL
Sbjct: 49 IGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQ 108
Query: 437 NMLKEDELRDAVILVFANKQDMPN 508
ML EDELRDA++LVFANKQD+PN
Sbjct: 109 RMLNEDELRDALLLVFANKQDLPN 132
Score = 76.2 bits (179), Expect = 5e-15
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +3
Query: 129 SSVFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIP 254
S +F LFGK++MRILMVGLDAAGKTTILYKLKLGEIVTTIP
Sbjct: 6 SKLFQSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIP 47
Score = 57.2 bits (132), Expect = 2e-09
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = +1
Query: 511 MTAAELTNAXXXXXXXXXXWYIQATCATQGQGLYEGLDWLSNEL 642
M AAE+T+ WYIQATCAT G GLYEGL+WLS L
Sbjct: 134 MNAAEITDKLGLHSLRHRQWYIQATCATSGDGLYEGLEWLSTNL 177
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 131 bits (316), Expect = 1e-31
Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
Frame = +2
Query: 212 TLQIKTR*NRDYDT--AIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFV 385
T+ K + N+ T +GFNVETV YKNI F VWDVGGQDKIRPLWRHY+ T+GLIFV
Sbjct: 36 TILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFV 95
Query: 386 VDSSDRKRIAEAENELANMLKEDELRDAVILVFANKQDMP 505
VDS+D RI+EA EL ++ + E+RD ++LV ANKQD+P
Sbjct: 96 VDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLP 135
Score = 65.7 bits (153), Expect = 7e-12
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +3
Query: 129 SSVFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIP 254
S F+RLF K+MRILM+GLDAAGKTTILYKLKL + V TIP
Sbjct: 10 SKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIP 51
Score = 38.7 bits (86), Expect = 9e-04
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 511 MTAAELTNAXXXXXXXXXXWYIQATCATQGQGLYEGLDWLSNELAKK 651
++ A++T+ W +Q TCA G GL EGL WLS K
Sbjct: 138 LSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLSQNAKLK 184
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 85.4 bits (202), Expect = 8e-18
Identities = 35/81 (43%), Positives = 55/81 (67%)
Frame = +2
Query: 260 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELAN 439
GF + T+E + + FT+WD+GGQ +R W++Y+++T+ +I+VVDS D R+ E N L
Sbjct: 49 GFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQE 108
Query: 440 MLKEDELRDAVILVFANKQDM 502
+L E++L ILV ANK D+
Sbjct: 109 LLVEEKLLFTSILVLANKSDV 129
Score = 32.7 bits (71), Expect = 0.059
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +3
Query: 156 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTI 251
++++R+L++GLD AGKTTIL K L E V +
Sbjct: 14 EREVRVLLLGLDNAGKTTIL-KCLLNEDVNEV 44
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 65.3 bits (152), Expect = 9e-12
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +2
Query: 272 ETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELANMLKE 451
E + N+ FT +D+GG + R LWR Y+ G++++VD D +R++E++ EL +L
Sbjct: 57 EELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAM 116
Query: 452 DELRDAVILVFANKQDMP 505
+EL L+ NK D P
Sbjct: 117 EELARVPFLILGNKIDAP 134
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 159 KQMRILMVGLDAAGKTTILYKLKLGEIVTTIP 254
K ++L +GLD AGKTT+L+ LK + P
Sbjct: 19 KHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQP 50
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +2
Query: 257 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENE 430
I F + T+E K I +WD GQ++ R + YY+ G++ + D +D+K
Sbjct: 44 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTW 103
Query: 431 LANMLKEDELRDAVILVFANKQD 499
+N +++ + ++ NK D
Sbjct: 104 FSN-VEQHASENVYKILIGNKCD 125
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 281 EYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELANMLKEDEL 460
+ K I +WD GQ+K R + R+YY+ G + V D +++ E + L+++
Sbjct: 58 QQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPS 117
Query: 461 RDAVILVFANKQDMPNR 511
V+L +K D+ N+
Sbjct: 118 TICVVLA-GSKSDLQNQ 133
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 42.7 bits (96), Expect = 6e-05
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENE 430
+ F + T E K + +WD GQ++ R + YY+ G+I V D +D+ +
Sbjct: 43 VDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQW 102
Query: 431 LANMLKEDELRDAVILVFANKQDMPNR 511
L + + L+ NK DM ++
Sbjct: 103 LQE-IDRYAVEGVNRLLVGNKSDMVDK 128
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 38.7 bits (86), Expect = 9e-04
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 278 VEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELANMLKEDE 457
++ K I +WD GQ++ R + YY+ G + V D + + L L+E
Sbjct: 54 LDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKE-LREHA 112
Query: 458 LRDAVILVFANKQDM 502
+ VI++ NK D+
Sbjct: 113 DSNIVIMLVGNKTDL 127
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/78 (21%), Positives = 39/78 (50%)
Frame = +2
Query: 278 VEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELANMLKEDE 457
+E + + +WD GQ++ R L Y +++ I V D ++ E + + ++ +
Sbjct: 55 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAER 113
Query: 458 LRDAVILVFANKQDMPNR 511
D +I++ NK D+ ++
Sbjct: 114 GDDVIIVLVGNKTDLADK 131
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 35.9 bits (79), Expect = 0.006
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 239 RDYDTAIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVV--DSSDRKRI 412
R ++ +G + + ++ ++DVGGQ R W + ++N +IF V + D+K
Sbjct: 174 RSRNSTLGISEISFTLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLNDYDKKLY 233
Query: 413 AEAENELANMLKEDELRDAVI 475
A E +++ L D++I
Sbjct: 234 ERAAPERNRLVESISLFDSII 254
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 35.9 bits (79), Expect = 0.006
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +2
Query: 281 EYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELANMLKEDEL 460
E ++ +WD GQ++ + L YY+N I V D + + +A++ + L+
Sbjct: 60 ENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKE-LQRQAP 118
Query: 461 RDAVILVFANKQDM 502
VI + NK D+
Sbjct: 119 EGIVIALAGNKLDL 132
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 34.3 bits (75), Expect = 0.019
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +2
Query: 236 NRDYDTAIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDR 403
+R+Y IG + T V+ K ++ +WD GQ++ + L +Y+ + V + ++
Sbjct: 34 SREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNS 93
Query: 404 KRIAEAEN---ELANMLKEDELRDAVILV 481
K EN E +DE I+V
Sbjct: 94 KSFDSVENWRQEFLYQTSQDECAFPFIIV 122
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 33.9 bits (74), Expect = 0.026
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 260 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELAN 439
G + ET + +DVGGQ R W H ++N L+F+V + + +N N
Sbjct: 223 GISEETFLLNRHHYRFFDVGGQRSERRKWIHCFENVTALLFLVSLAGYDQCLVEDNS-GN 281
Query: 440 MLKE 451
++E
Sbjct: 282 QMQE 285
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +3
Query: 153 GKKQMRILMVGLDAAGKTTILYKLKL 230
G +++L++G +GKTTI+ +++L
Sbjct: 71 GGNDIKVLLLGAGDSGKTTIMKQMRL 96
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 31.9 bits (69), Expect = 0.10
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 236 NRDYDTAIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDR 403
++DY IG + T V+ K ++ +WD GQ++ + L +Y+ + V D ++
Sbjct: 34 SKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNS 93
Query: 404 K 406
K
Sbjct: 94 K 94
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 31.5 bits (68), Expect = 0.14
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +2
Query: 284 YKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRIAEAENELANMLKEDELR 463
+ I F VWD GQ+K+ L YY Q I + D + R + ++++ E
Sbjct: 55 FGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCE-- 112
Query: 464 DAVILVFANKQDMPNR 511
+ I++ NK D+ R
Sbjct: 113 NIPIVLCGNKVDVKER 128
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 29.5 bits (63), Expect = 0.55
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 IGFNVETVEYKN--ISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSSDRKRI 412
+ F +T+ +N I+F++WD+GGQ + + + ++F+ D S + +
Sbjct: 45 VNFMEKTISIRNTEITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTL 98
>SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 28.7 bits (61), Expect = 0.96
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 156 KKQMRILMVGLDAAGKTTILYKLKLGEI--VTTIPQSVSMWKQLS 284
KKQ+ + ++G AGK++I+ L+ ++ V IP +W+ ++
Sbjct: 308 KKQISVGLIGFPNAGKSSIINTLRKKKVCNVAPIPGETKVWQYVA 352
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +2
Query: 290 NISFTVWDVGGQDKIRPLW-----RHYYQNTQGLIFVVDSSDRK 406
N+ +WD GGQ+ + H ++N Q LI+V D R+
Sbjct: 50 NLVLNLWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESRE 93
>SPAC29B12.11c |||human WW domain binding protein-2
ortholog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 174
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -3
Query: 718 IVEVNRECIFPCFPGIDLE-LSFISSLAHWTANQDLHKAPVLV*RMLLGCTTVDFSDYQ 545
I+ + EC+F CF G+ + L SL WT + L + T DF D+Q
Sbjct: 16 ILLLENECMFDCFDGVAISILCKPPSLKSWTCTKGLLCLTNQRLVYIAKDTDCDFKDFQ 74
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 278 VEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLI--FVVDSSD 400
V+ +I ++WD GQ++ L Y +T ++ F VDS D
Sbjct: 56 VDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRD 98
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 138 FTRLFGKKQMRILMVGLDAAGKTTILYKLKL 230
FT G+ + I+MVGL +GKTT KL L
Sbjct: 94 FTPKKGRPSV-IMMVGLQGSGKTTTCSKLAL 123
>SPAC23H4.07c |srp102||signal recognition particle receptor beta
subunit Srp102 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 138 FTR-LFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPQ---SVSMWK 275
FTR KK + ++G +GKT++ +L E TT+P + ++WK
Sbjct: 28 FTRKTIQKKLPAVFLIGPSDSGKTSLFCELIYKEKKTTVPSIEPNEAVWK 77
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 278 VEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLI--FVVDSSD 400
V+ K++ +WD GQ++ L Y ++ F +DS D
Sbjct: 51 VDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPD 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,865,059
Number of Sequences: 5004
Number of extensions: 56486
Number of successful extensions: 179
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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