Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120328.Seq
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   3.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.2  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   7.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 539 WTDGVRSLAVAGSNTTIFLSGSGYNLSSH 453
           W+DG + +A    N        GY+L+ H
Sbjct: 404 WSDGNQQIAFGRGNKGFVAFTIGYDLNQH 432


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 539 WTDGVRSLAVAGSNTTIFLSGSGYNLSSH 453
           W+DG + +A    N        GY+L+ H
Sbjct: 405 WSDGNQQIAFGRGNKGFVAFTIGYDLNQH 433


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 539 WTDGVRSLAVAGSNTTIFLSGSGYNLSSH 453
           W+DG + +A    N        GY+L+ H
Sbjct: 405 WSDGNQQIAFGRGNKGFVAFTIGYDLNQH 433


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 463 CLPIRANYSN*PVDKIRFSKICLRNNYNSVL 371
           C      Y N  VD+I  S+  L+N +N ++
Sbjct: 16  CEQYTTKYDNINVDEILASERLLKNYFNCIM 46


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 778 SVLHNQPRQQRINFTPPEKSET 843
           S++ N P+     + PP  S+T
Sbjct: 11  SLISNTPKDMNARYLPPSLSDT 32


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 830 SGGVKLIRCCRG*LCKTDESTC 765
           S G++ IRC  G     D+ TC
Sbjct: 67  SSGLQAIRCPAGLYFDIDKQTC 88


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 606 CFWHVLWFQSRKTKIRRACPALLDRWCT*SC 514
           C W+ L  +S K   +R   AL    CT SC
Sbjct: 295 CIWYWLDRESAKNVDQRIQKALFLFACTNSC 325


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 606 CFWHVLWFQSRKTKIRRACPALLDRWCT*SC 514
           C W+ L  +S K   +R   AL    CT SC
Sbjct: 295 CIWYWLDRESAKNVDQRIQKALFLFACTNSC 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,426
Number of Sequences: 336
Number of extensions: 5315
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)