Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120328.Seq
         (898 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003596-1|AAO39599.1|  401|Drosophila melanogaster GM21055p pro...    34   0.30 
AE014296-145|AAF47420.1|  394|Drosophila melanogaster CG13902-PA...    34   0.30 
AE014296-2654|AAZ66062.1|  166|Drosophila melanogaster CG33687-P...    30   3.7  
AE014298-1518|AAF47970.1|  453|Drosophila melanogaster CG1637-PA...    30   4.9  
BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p pro...    29   8.6  
BT010061-1|AAQ22530.1|  597|Drosophila melanogaster LD15332p pro...    29   8.6  
AE014296-1464|AAF50410.2|  597|Drosophila melanogaster CG6694-PA...    29   8.6  

>BT003596-1|AAO39599.1|  401|Drosophila melanogaster GM21055p
           protein.
          Length = 401

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 26/70 (37%), Positives = 32/70 (45%)
 Frame = -3

Query: 551 ALHSWTDGVRSLAVAGSNTTIFLSGSGYNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSI 372
           ALH W D    L VAG+ T     GS Y     S +L K+    +  F   PSK  Q +I
Sbjct: 196 ALHKWLDLNYLLQVAGNRTVPIEIGSNYASDEWSQQLVKIRDFLSRQFGKEPSKAGQ-NI 254

Query: 371 EKLPRFTLIA 342
           E L +  L A
Sbjct: 255 EYLAQHELFA 264


>AE014296-145|AAF47420.1|  394|Drosophila melanogaster CG13902-PA
           protein.
          Length = 394

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 26/70 (37%), Positives = 32/70 (45%)
 Frame = -3

Query: 551 ALHSWTDGVRSLAVAGSNTTIFLSGSGYNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSI 372
           ALH W D    L VAG+ T     GS Y     S +L K+    +  F   PSK  Q +I
Sbjct: 189 ALHKWLDLNYLLQVAGNRTVPIEIGSNYASDEWSQQLVKIRDFLSRQFGKEPSKAGQ-NI 247

Query: 371 EKLPRFTLIA 342
           E L +  L A
Sbjct: 248 EYLAQHELFA 257


>AE014296-2654|AAZ66062.1|  166|Drosophila melanogaster CG33687-PA
           protein.
          Length = 166

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +1

Query: 364 NFSILNCSCFEGRFLKNEFCRLANLNSLHEWED---KLYPEPDKNIVV 498
           +F+ L C   +  F   E CR+  +N  H++ D   KLY  P  NI++
Sbjct: 13  SFTNLKCEMIDRTFGNFEMCRIKAVNRTHKYIDINLKLYILPINNIMI 60


>AE014298-1518|AAF47970.1|  453|Drosophila melanogaster CG1637-PA,
           isoform A protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +2

Query: 578 LWNHKTCQKQLWPVF*HSIRRHSQTQQYI 664
           LW H+ C +++WP++ +++   S  + Y+
Sbjct: 339 LWAHEHCYERMWPMYNYTVFNGSLAEPYV 367


>BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 684 VFAKCCQIYCCVCECLRIEC*KTGQSCF 601
           +++ CC  YCC C C    C      CF
Sbjct: 5   IYSCCCCCYCCCCTCCCCCCCSCCCRCF 32


>BT010061-1|AAQ22530.1|  597|Drosophila melanogaster LD15332p
           protein.
          Length = 597

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/92 (20%), Positives = 46/92 (50%)
 Frame = -3

Query: 584 SKVGKPKSAGLALHSWTDGVRSLAVAGSNTTIFLSGSGYNLSSHSCKLFKLASRQNSFFK 405
           +K+ K  ++  A  + ++  R+L    S  T+F+SG+ + L    C+L ++++      +
Sbjct: 253 NKITKLDASSSARVAKSESPRTLQRTLSGRTLFVSGNKFILDPSGCRLTRVSTSSTGATQ 312

Query: 404 NLPSKQLQFSIEKLPRFTLIAICSCHNIFVNS 309
           +  ++ +   I+ +   T +A     N+FV +
Sbjct: 313 SSVNRSILRRID-IGGLTYVASPKALNVFVRT 343


>AE014296-1464|AAF50410.2|  597|Drosophila melanogaster CG6694-PA
           protein.
          Length = 597

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/92 (20%), Positives = 46/92 (50%)
 Frame = -3

Query: 584 SKVGKPKSAGLALHSWTDGVRSLAVAGSNTTIFLSGSGYNLSSHSCKLFKLASRQNSFFK 405
           +K+ K  ++  A  + ++  R+L    S  T+F+SG+ + L    C+L ++++      +
Sbjct: 253 NKITKLDASSSARVAKSESPRTLQRTLSGRTLFVSGNKFILDPSGCRLTRVSTSSTGATQ 312

Query: 404 NLPSKQLQFSIEKLPRFTLIAICSCHNIFVNS 309
           +  ++ +   I+ +   T +A     N+FV +
Sbjct: 313 SSVNRSILRRID-IGGLTYVASPKALNVFVRT 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,572,096
Number of Sequences: 53049
Number of extensions: 981324
Number of successful extensions: 3440
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3436
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)