Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120326.Seq
         (769 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-580|AAN11538.2|  457|Drosophila melanogaster CG32281-PA...    33   0.33 
BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p pro...    32   0.75 

>AE014296-580|AAN11538.2|  457|Drosophila melanogaster CG32281-PA
           protein.
          Length = 457

 Score = 33.5 bits (73), Expect = 0.33
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +3

Query: 486 RVASDRLQNESDVINENNLITQIFVQFFYNLIC-DKAYSLYTKRDMCVPFVKECKKATIG 662
           +V  D+L N   V+N+ + I   +  F   LIC D  Y + TK +  VPF  +  K    
Sbjct: 175 QVLRDKLPNCRTVVNKASSIDNTYRNFQLELICGDPDYQVETKEN-GVPFEFDFSKVYWN 233

Query: 663 LR-QEDHERVLSILNA 707
            R   +HER++ +L +
Sbjct: 234 PRLSTEHERIVKMLKS 249


>BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p
           protein.
          Length = 841

 Score = 32.3 bits (70), Expect = 0.75
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 358 NKIQCFECKCRYLASSLSTLDEGLQNGWDIFLRP 459
           N+ Q  +C CR  A  +S+ +   QN W I LRP
Sbjct: 1   NRYQDVQCVCRLSAIDISSANRYFQNNWLISLRP 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,745,177
Number of Sequences: 53049
Number of extensions: 794443
Number of successful extensions: 2516
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2505
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)