Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120325.Seq
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   3.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.1  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 432 CLNCVIYVAVVFTLLIFFTLCI 367
           C+    Y  ++FT+ + F LCI
Sbjct: 112 CVYYFYYAFIIFTVHLLFLLCI 133


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 134 FLNRLLKHIDPYPL-SRMYYNAANTMFYT 217
           F+N+L   +DPY L ++   +A N   YT
Sbjct: 134 FVNQLFSAVDPYGLVAQWATDALNPSVYT 162


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 347 IWEFNRRMQSVKNINKVK 400
           IW  NRRM+  K I  +K
Sbjct: 269 IWFQNRRMKLKKEIQAIK 286


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 350 WEFNRRMQSVKNINKVKTTAT*ITQFKHGLSSPSS 454
           W  N+R++  KNI K +  A      K   +SP S
Sbjct: 280 WFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYS 314


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 208 VLHDHGKLCRVQLQV 252
           +LHD   +C  QLQV
Sbjct: 105 ILHDTQPMCNPQLQV 119


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 347 IWEFNRRMQSVKNINKVK 400
           IW  NRRM+  K I  +K
Sbjct: 51  IWFQNRRMKLKKEIQAIK 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,938
Number of Sequences: 336
Number of extensions: 3846
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)