Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120325.Seq
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK023787-1|BAB14678.1|  858|Homo sapiens protein ( Homo sapiens ...    34   0.64 
BC098587-1|AAH98587.1| 1072|Homo sapiens FAM65A protein protein.       33   1.5  
BC054512-1|AAH54512.1|  941|Homo sapiens FAM65A protein protein.       33   1.5  
AK127792-1|BAC87139.1| 1223|Homo sapiens protein ( Homo sapiens ...    33   1.5  
AB067517-1|BAB67823.1|  664|Homo sapiens KIAA1930 protein protein.     33   1.5  
AB058704-1|BAB47430.1| 1227|Homo sapiens KIAA1801 protein protein.     31   4.5  
U47742-1|AAC50662.1| 2004|Homo sapiens monocytic leukaemia zinc ...    30   7.9  

>AK023787-1|BAB14678.1|  858|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13725 fis, clone PLACE3000009, weakly similar to
           DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
           2.7.7.6). ).
          Length = 858

 Score = 33.9 bits (74), Expect = 0.64
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = +1

Query: 505 PDHTQTQKLGLQTPPG*TSHIQKIQEPFIDKPPKLQNTLLLTARHSTHPTVARNEAISSP 684
           P HT T      T P   +H   +  P    P     +L+ TA   THPT +     +SP
Sbjct: 254 PTHTSTSPTHTPTSP---THKTSMSPPTTTSPTPSGMSLVQTATSPTHPTTSPTHPTTSP 310

Query: 685 ALVWLSTVT 711
            L+ +S  T
Sbjct: 311 ILINVSPST 319


>BC098587-1|AAH98587.1| 1072|Homo sapiens FAM65A protein protein.
          Length = 1072

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +1

Query: 505 PDHTQTQKLGLQTPPG*TSHIQKIQEPFIDKPPKLQNTLLLTARHSTHPTVARNEAISSP 684
           P HT T      T P   +H   +  P    P      L+ TA   THPT +     +SP
Sbjct: 468 PTHTSTSPTHTPTSP---THKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPTTSP 524

Query: 685 ALVWLSTVT 711
            L+ +S  T
Sbjct: 525 ILINVSPST 533


>BC054512-1|AAH54512.1|  941|Homo sapiens FAM65A protein protein.
          Length = 941

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +1

Query: 505 PDHTQTQKLGLQTPPG*TSHIQKIQEPFIDKPPKLQNTLLLTARHSTHPTVARNEAISSP 684
           P HT T      T P   +H   +  P    P      L+ TA   THPT +     +SP
Sbjct: 337 PTHTSTSPTHTPTSP---THKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPTTSP 393

Query: 685 ALVWLSTVT 711
            L+ +S  T
Sbjct: 394 ILINVSPST 402


>AK127792-1|BAC87139.1| 1223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45893 fis, clone OCBBF3023543. ).
          Length = 1223

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +1

Query: 505 PDHTQTQKLGLQTPPG*TSHIQKIQEPFIDKPPKLQNTLLLTARHSTHPTVARNEAISSP 684
           P HT T      T P   +H   +  P    P      L+ TA   THPT +     +SP
Sbjct: 619 PTHTSTSPTHTPTSP---THKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPTTSP 675

Query: 685 ALVWLSTVT 711
            L+ +S  T
Sbjct: 676 ILINVSPST 684


>AB067517-1|BAB67823.1|  664|Homo sapiens KIAA1930 protein protein.
          Length = 664

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +1

Query: 505 PDHTQTQKLGLQTPPG*TSHIQKIQEPFIDKPPKLQNTLLLTARHSTHPTVARNEAISSP 684
           P HT T      T P   +H   +  P    P      L+ TA   THPT +     +SP
Sbjct: 61  PTHTSTSPTHTPTSP---THKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPTTSP 117

Query: 685 ALVWLSTVT 711
            L+ +S  T
Sbjct: 118 ILINVSPST 126


>AB058704-1|BAB47430.1| 1227|Homo sapiens KIAA1801 protein protein.
          Length = 1227

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +1

Query: 565  IQKIQEPFIDKPPKLQNTLLLTARHSTHPTVARNEAISSPALVWLSTVTKSCLQDFKLSP 744
            I K+Q  ++ + P L+N +LL   H    +++  EA SS  L  L  +T S     K+ P
Sbjct: 908  ILKLQGNYLSELPSLENLVLLRELHLDDNSISTVEAFSSYWLPLLQNITISQNSLTKIVP 967

Query: 745  L 747
            L
Sbjct: 968  L 968


>U47742-1|AAC50662.1| 2004|Homo sapiens monocytic leukaemia zinc
            finger protein protein.
          Length = 2004

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -1

Query: 716  DFVTVESQTRAGDEIASFLATVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEV 555
            D  ++ES T   +  +S+ +T+G   C   +S   C++GGLS + S     C V
Sbjct: 1552 DLGSIESTTENYENPSSYDSTMGGSICGNSSSQSSCSYGGLSSSSSLTQSSCVV 1605


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,315,156
Number of Sequences: 237096
Number of extensions: 2183453
Number of successful extensions: 13921
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13921
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)