Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120324.Seq
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    26   0.19 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    24   0.75 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   0.75 
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   4.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   5.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   9.3  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 96  HASLASLKINLSSVIHTEL*TNRIYFYFYRT 188
           ++SLA  ++N S  + T   T+   FYFY+T
Sbjct: 17  NSSLAGFEVNSSEQLTTPTPTDINSFYFYKT 47


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 374 HKIIHYRIHPFGCEHILLK 318
           H  +H    P+GCEH  +K
Sbjct: 56  HLRVHTGERPYGCEHCSMK 74


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 374 HKIIHYRIHPFGCEHILLK 318
           H  +H    P+GCEH  +K
Sbjct: 209 HLRVHTGERPYGCEHCSMK 227


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 401 CTHKH*TYLHKIIHYRI 351
           C  KH   + K+IHY +
Sbjct: 73  CNDKHKEGIRKVIHYLV 89


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 183 YRNKNKCGWSTARCGSRNLNLF*VRLEKH 97
           Y  +NK GW  +   + +LN   V++ +H
Sbjct: 119 YYRENKQGWQNSIRHNLSLNKCFVKVPRH 147


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 221 CFLFFVCLYMQ 253
           C LFF+ LY Q
Sbjct: 17  CILFFIYLYWQ 27


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 391 LCVQFSSSCVNLIKKK 438
           +CV FS+  +  +KKK
Sbjct: 154 MCVTFSNLGIQCVKKK 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,106
Number of Sequences: 336
Number of extensions: 1612
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)