Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120324.Seq
         (446 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.1  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   8.1  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 66  YYLPGKSYDRQESAGQDY 13
           ++LP K YD  +  G++Y
Sbjct: 242 FWLPSKEYDLPDYRGEEY 259


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 66  YYLPGKSYDRQESAGQDY 13
           ++LP K YD  +  G++Y
Sbjct: 242 FWLPSKEYDLPDYRGEEY 259


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 258 CFLCLDLILVNDIFILSTNALKQ 326
           C L L+     D  +L+++ALKQ
Sbjct: 438 CLLSLEKTYERDTCLLASDALKQ 460


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 258 CFLCLDLILVNDIFILSTNALKQ 326
           C L L+     D  +L+++ALKQ
Sbjct: 476 CLLSLEKTYERDTCLLASDALKQ 498


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 349 TLLDVNTSCLRAFVLKIKIS 290
           TLL ++ SC+ AF     +S
Sbjct: 244 TLLSISASCVIAFATSALVS 263


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,284
Number of Sequences: 438
Number of extensions: 1432
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)