Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120323.Seq
         (841 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23411-2|AAC46731.2|  471|Caenorhabditis elegans Hypothetical pr...    31   0.77 
Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z82266-6|CAB05176.1|  393|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z82085-8|CAB04990.1|  270|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U41532-4|AAK68320.1|  767|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U41532-3|AAK68319.1|  797|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U13644-5|AAB52681.1|  451|Caenorhabditis elegans Hypothetical pr...    28   9.5  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    28   9.5  
AF016683-2|AAB66194.1|  709|Caenorhabditis elegans Hypothetical ...    28   9.5  

>U23411-2|AAC46731.2|  471|Caenorhabditis elegans Hypothetical
           protein T25E4.2 protein.
          Length = 471

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 154 FVFYGV-IIAFVHGNVVQRRGRIFNFLRHFYDYSPYGIAFR 35
           F+FYG+ II F+   +  R  + F F  H Y+Y   G  +R
Sbjct: 397 FIFYGIAIIVFILEIIFHRMTKNFTFFGHSYNYHLSGFEWR 437


>Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical
           protein F44F1.4 protein.
          Length = 559

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
 Frame = +1

Query: 376 KESKRRKLEDED---FLKLKALEFSKDIVNEKLQKIIVVTDGMKRLYDIATAKIL 531
           +E K++KL++E+    LK++ LE  KD   E++ K ++  + MK+L +    KIL
Sbjct: 379 QEEKQKKLDEEEQQKVLKIQELEKQKD---EQIMKSMLELEDMKKLLEEKDEKIL 430


>Z82266-6|CAB05176.1|  393|Caenorhabditis elegans Hypothetical
           protein F23B2.10 protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 415 LKLKALEFSKD-IVNEKLQKIIVVTDGMKRLYDIATA 522
           L++K++    D ++N  L++ +V+   +KRLYDIA A
Sbjct: 141 LRIKSIGICADCVINNGLKEDVVMMKNIKRLYDIAKA 177


>Z82085-8|CAB04990.1|  270|Caenorhabditis elegans Hypothetical
           protein ZK218.11 protein.
          Length = 270

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 224 SPAVRKTPGKNLRKTICCRLAATNVPIDPKLV 319
           +PAV+  PG +  + + C  AA   P++P LV
Sbjct: 81  TPAVQPVPGASTARPLKCYAAAATDPVNPDLV 112


>Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical
           protein K04G2.6 protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = -1

Query: 139 VIIAFVHGNVVQRRGRIFNFLRHFYDYSPYGIAFRLHQL 23
           V++ ++  +VV+ R  + N++RH +   P  +   +HQ+
Sbjct: 345 VLLKYIKYDVVETRVTVLNWIRHLHSSMPGQLFVHMHQI 383


>U41532-4|AAK68320.1|  767|Caenorhabditis elegans Hypothetical
           protein F11D5.3b protein.
          Length = 767

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 206 LDTSATSPAVRKTPGKNLRKTICCRLAATNVPIDPKLV*Y 325
           LD +  +  +R  P  N  +T+C R+     P D  LV Y
Sbjct: 121 LDRAIIARRIRIVPVSNSTRTVCMRVEVFGCPFDDSLVFY 160


>U41532-3|AAK68319.1|  797|Caenorhabditis elegans Hypothetical
           protein F11D5.3a protein.
          Length = 797

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 206 LDTSATSPAVRKTPGKNLRKTICCRLAATNVPIDPKLV*Y 325
           LD +  +  +R  P  N  +T+C R+     P D  LV Y
Sbjct: 151 LDRAIIARRIRIVPVSNSTRTVCMRVEVFGCPFDDSLVFY 190


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
            Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 462  ASKNYCGHRRYETVVRYCNCKNSLETLPSAANYGSLLKRLNLYNLD 599
            A +N   H RY T  +Y + +N++  +  +  Y     RL  YN D
Sbjct: 1386 ADENPANHFRYHTQEKYYDMQNTISDIMDSKWYTQNSMRLMFYNGD 1431


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
            Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 462  ASKNYCGHRRYETVVRYCNCKNSLETLPSAANYGSLLKRLNLYNLD 599
            A +N   H RY T  +Y + +N++  +  +  Y     RL  YN D
Sbjct: 1386 ADENPANHFRYHTQEKYYDMQNTISDIMDSKWYTQNSMRLMFYNGD 1431


>U13644-5|AAB52681.1|  451|Caenorhabditis elegans Hypothetical
           protein F56D2.2 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
 Frame = -2

Query: 714 PKICNLPIDEKAFCHCYHC------HCTVSMETATRKNLHS-FQYDRDCTGLAF 574
           PK C++ I++   CH  HC       C +  ET  +++ +  FQ D  C+G  F
Sbjct: 340 PK-CSVSIEKNEGCHKMHCTKCDTYFCWLCSETLDKEDPYKHFQGDGSCSGRLF 392


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
            protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 462  ASKNYCGHRRYETVVRYCNCKNSLETLPSAANYGSLLKRLNLYNLD 599
            A +N   H RY T  +Y + +N++  +  +  Y     RL  YN D
Sbjct: 1386 ADENPANHFRYHTQEKYYDMQNTISDIMDSKWYTQNSMRLMFYNGD 1431


>AF016683-2|AAB66194.1|  709|Caenorhabditis elegans Hypothetical
           protein K09F6.4 protein.
          Length = 709

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 690 QLVNYIFLASNYFQNCAKNFNYMRELFNVFGP--FKQIDFMVMFVIK 824
           ++VN I+LA+      AK ++ + E FN FGP  F Q+  + M  +K
Sbjct: 27  RIVNSIYLATELTAGTAKIYDLIAEFFN-FGPDSFNQLQSIDMKQLK 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,583,364
Number of Sequences: 27780
Number of extensions: 326157
Number of successful extensions: 1219
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)