Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120322.Seq
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 235 FIKFLIFVPSLN*ILRIHILKPPTYFKLFISLFNC 339
           +  F+IF   L  +L I+    P +F L I  F C
Sbjct: 117 YYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYC 151


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 331 FNCLKKNKLFSSHSRFGNTFILNLILV 411
           F  L+KN LF       NTF   LI V
Sbjct: 59  FASLEKNPLFDGQLYSFNTFAKLLIFV 85


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 295 KPPTYFKLFISLFNCLKKNKLFSSHSRFG 381
           K  +Y  LF   FNC    KL  +  RFG
Sbjct: 355 KELSYLILFSIGFNCFWVMKLLYNVLRFG 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,761
Number of Sequences: 336
Number of extensions: 3069
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)