Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120322.Seq
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            24   3.9  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   6.8  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.8  

>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 84  VKTVQYYIS*NASHFCDLNLNEVYLMI 4
           VK   Y I+ N +H+CD N    Y  +
Sbjct: 100 VKPDSYGIAVNGAHYCDFNHRMPYASV 126


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 63  YNIVLFLRSDPNRLD*MKTLPKNFEAKRLQNFKTSCIESNIE 188
           Y+++L +   PN  D +K L KNF    L   + S ++  ++
Sbjct: 359 YSLLLMV---PNNKDGLKELIKNFNPDTLSTVQKSLVQMPVQ 397


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = -3

Query: 249 EKFNKTYNFVFG*EFEYNLSILYLIQYMKF*NFVAVSPQNSLAVF--SFNPIYLDHYVKT 76
           E F+K +N V G       +  Y IQ++    F  + P+   A+      P  +  YV+ 
Sbjct: 21  EPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQRQALLHEGTGPRAMSAYVE- 79

Query: 75  VQYYIS*NASHFCDLNLNEVYL 10
               I  N+ +   ++  E+YL
Sbjct: 80  ---IIFDNSDNRVPIDKEEIYL 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,176
Number of Sequences: 2352
Number of extensions: 10775
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)