Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120322.Seq
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC...    29   7.8  
AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB...    29   7.8  
AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA...    29   7.8  

>AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC,
            isoform C protein.
          Length = 2682

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +1

Query: 196  IIFEFLSKNKIIRFIKFLIFVPSLN*ILRIHILKPPTYFKLFISLFNCLKKNKLFSSHSR 375
            IIF F S   I  ++ F+  VP++      + L PP  F +    +  L   ++ S + +
Sbjct: 2139 IIFHFFSVIGIHIWMFFV--VPAVT-ERTFNSLAPPIIFYVIKCFYMLLSSYQIKSGYPK 2195

Query: 376  --FGNTFILNLILVNKVKYV*WLQVPF 450
               GN F     +VN + +  ++Q+PF
Sbjct: 2196 RILGNFFTKGFSMVNMIAFKVYMQIPF 2222


>AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB,
            isoform B protein.
          Length = 2720

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +1

Query: 196  IIFEFLSKNKIIRFIKFLIFVPSLN*ILRIHILKPPTYFKLFISLFNCLKKNKLFSSHSR 375
            IIF F S   I  ++ F+  VP++      + L PP  F +    +  L   ++ S + +
Sbjct: 2177 IIFHFFSVIGIHIWMFFV--VPAVT-ERTFNSLAPPIIFYVIKCFYMLLSSYQIKSGYPK 2233

Query: 376  --FGNTFILNLILVNKVKYV*WLQVPF 450
               GN F     +VN + +  ++Q+PF
Sbjct: 2234 RILGNFFTKGFSMVNMIAFKVYMQIPF 2260


>AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA,
            isoform A protein.
          Length = 2771

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +1

Query: 196  IIFEFLSKNKIIRFIKFLIFVPSLN*ILRIHILKPPTYFKLFISLFNCLKKNKLFSSHSR 375
            IIF F S   I  ++ F+  VP++      + L PP  F +    +  L   ++ S + +
Sbjct: 2228 IIFHFFSVIGIHIWMFFV--VPAVT-ERTFNSLAPPIIFYVIKCFYMLLSSYQIKSGYPK 2284

Query: 376  --FGNTFILNLILVNKVKYV*WLQVPF 450
               GN F     +VN + +  ++Q+PF
Sbjct: 2285 RILGNFFTKGFSMVNMIAFKVYMQIPF 2311


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,648,344
Number of Sequences: 53049
Number of extensions: 434218
Number of successful extensions: 675
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)