Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120321.Seq
         (814 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   2.2  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   6.7  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   6.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   6.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   6.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.8  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 698 CKFCDSLFTKKLSLAIN 748
           CK+C+  FTK  +L I+
Sbjct: 82  CKYCNRQFTKSYNLLIH 98


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 387 RSFAFLSPANTILVPGMY 334
           R FA   P NT L  G Y
Sbjct: 266 RGFALADPTNTSLYAGTY 283


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +3

Query: 498 PISISVMYSAMLQLHYNIKVF 560
           PI + ++YS+++ L+Y  +VF
Sbjct: 215 PIIMIILYSSLMVLNYIDEVF 235


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 378 QMSVLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFLFS 497
           ++S + L+  ++ L      + NS+R + +N+  IYF +S
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWS 325


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 378 QMSVLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFLFS 497
           ++S + L+  ++ L      + NS+R + +N+  IYF +S
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWS 325


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 378 QMSVLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFLFS 497
           ++S + L+  ++ L      + NS+R + +N+  IYF +S
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWS 325


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 234 TGQAAGFHTPMPIKLRALHGMTTLSLNILRIPRN 335
           TG   G     P    A HG+ TLS  +   P N
Sbjct: 162 TGNQIGVQISAPTIFGARHGLETLSQLMDVYPNN 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,177
Number of Sequences: 336
Number of extensions: 4953
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)