Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120321.Seq
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.4  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    23   4.4  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   4.4  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    23   4.4  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    23   4.4  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    23   4.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 7/31 (22%), Positives = 19/31 (61%)
 Frame = +1

Query: 103  WVYLQETLKMERKFLYNDVPSATLLKLVANT 195
            W  +  ++KM+R+F+  ++  +++ +L   T
Sbjct: 1544 WTLVSNSVKMQRRFVVTNLQPSSVYQLKVET 1574


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 7/31 (22%), Positives = 19/31 (61%)
 Frame = +1

Query: 103  WVYLQETLKMERKFLYNDVPSATLLKLVANT 195
            W  +  ++KM+R+F+  ++  +++ +L   T
Sbjct: 1540 WTLVSNSVKMQRRFVVTNLQPSSVYQLKVET 1570


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 501 ISISVMYSAMLQLH-YNIKV-FVSSKSQHNHLQLLFVNTYVPG 623
           I I ++ +   +LH  +I++  + +K++ +H+Q L  NT  PG
Sbjct: 145 IVIGIVKTVAKKLHGTDIEMRILKTKNECDHVQFLITNTSGPG 187


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 501 ISISVMYSAMLQLH-YNIKV-FVSSKSQHNHLQLLFVNTYVPG 623
           I I ++ +   +LH  +I++  + +K++ +H+Q L  NT  PG
Sbjct: 145 IVIGIVKTVAKKLHGTDIEMRILKTKNECDHVQFLITNTSGPG 187


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 250 PAAWPVFRPKNPCRFGPTL 194
           P ++P F P N  RF P+L
Sbjct: 381 PTSFPRFIPPNAYRFRPSL 399


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 250 PAAWPVFRPKNPCRFGPTL 194
           P ++P F P N  RF P+L
Sbjct: 381 PTSFPRFIPPNAYRFRPSL 399


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 250 PAAWPVFRPKNPCRFGPTL 194
           P ++P F P N  RF P+L
Sbjct: 381 PTSFPRFIPPNAYRFRPSL 399


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 250 PAAWPVFRPKNPCRFGPTL 194
           P ++P F P N  RF P+L
Sbjct: 381 PTSFPRFIPPNAYRFRPSL 399


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 250 PAAWPVFRPKNPCRFGPTL 194
           P ++P F P N  RF P+L
Sbjct: 370 PTSFPRFIPPNAYRFRPSL 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,586
Number of Sequences: 438
Number of extensions: 5824
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)