Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120319.Seq
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    32   0.023
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    32   0.023
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        24   6.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   6.0  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 31.9 bits (69), Expect = 0.023
 Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +3

Query: 252 KVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQR-KDEM 428
           K  A+  EE  +++E +ER+ A+   QIE ++ Q+   +  L + YTG +  ++  K E 
Sbjct: 667 KTSAKLAEEAAERRERMERLEAMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRELKSEY 726

Query: 429 MHKKDELLQVKDTQVSNLI 485
            + K   +  + T + ++I
Sbjct: 727 GNSKIYPIFPRYTMLKDMI 745


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 31.9 bits (69), Expect = 0.023
 Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +3

Query: 252 KVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNRMYTGFQETMQR-KDEM 428
           K  A+  EE  +++E +ER+ A+   QIE ++ Q+   +  L + YTG +  ++  K E 
Sbjct: 667 KTSAKLAEEAAERRERMERLEAMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRELKSEY 726

Query: 429 MHKKDELLQVKDTQVSNLI 485
            + K   +  + T + ++I
Sbjct: 727 GNSKIYPIFPRYTMLKDMI 745


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 370 PTSTACTPGFRKLCR 414
           P +TACT G ++ CR
Sbjct: 21  PKTTACTAGNKRCCR 35


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 159 LPVHST*GITSSKSHSCNSMAYGSL 85
           +PV S   ++++ S SC+S A GSL
Sbjct: 233 IPVSSCSPLSTASSASCSSSAAGSL 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,256
Number of Sequences: 2352
Number of extensions: 16443
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)