Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120312.Seq
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr...    28   6.4  
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr...    28   6.4  
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr...    28   6.4  
AB023496-1|BAA97564.1|  793|Caenorhabditis elegans kinesin like ...    28   6.4  

>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like
           protein protein 4,isoform c protein.
          Length = 1576

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 507 KFLSSLSAMGLSQSTPLSQVFSSPHPFLT 421
           K++ SL+A G + STP++  F  P P  T
Sbjct: 667 KYIQSLTAGGFTPSTPMTPGFCLPTPITT 695


>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like
           protein protein 4,isoform b protein.
          Length = 1610

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 507 KFLSSLSAMGLSQSTPLSQVFSSPHPFLT 421
           K++ SL+A G + STP++  F  P P  T
Sbjct: 667 KYIQSLTAGGFTPSTPMTPGFCLPTPITT 695


>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like
           protein protein 4,isoform a protein.
          Length = 1595

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 507 KFLSSLSAMGLSQSTPLSQVFSSPHPFLT 421
           K++ SL+A G + STP++  F  P P  T
Sbjct: 667 KYIQSLTAGGFTPSTPMTPGFCLPTPITT 695


>AB023496-1|BAA97564.1|  793|Caenorhabditis elegans kinesin like
           protein KLP-4 protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 507 KFLSSLSAMGLSQSTPLSQVFSSPHPFLT 421
           K++ SL+A G + STP++  F  P P  T
Sbjct: 87  KYIQSLTAGGFTPSTPMTPGFCLPTPITT 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,736,419
Number of Sequences: 27780
Number of extensions: 307709
Number of successful extensions: 551
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)