Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120311.Seq
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    25   0.87 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.87 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.87 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    24   1.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    24   1.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.1  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 742 LENKIHVNVENTILYKQN 689
           LENK+ V  EN + Y QN
Sbjct: 81  LENKLGVRQENRVKYNQN 98


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 742 LENKIHVNVENTILYKQN 689
           LENK+ V  EN + Y QN
Sbjct: 141 LENKLGVRQENRVKYNQN 158


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 742 LENKIHVNVENTILYKQN 689
           LENK+ V  EN + Y QN
Sbjct: 141 LENKLGVRQENRVKYNQN 158


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 682 SLYSVCIKLCFLHSHGFCFLIIKRIFV 762
           +L SVC  +  L+SHGF F I   I +
Sbjct: 508 TLTSVCYFMIGLNSHGFRFYIACGIMI 534



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 344 IKSFINIYPPRTK 382
           I +F N+ PP+TK
Sbjct: 64  INAFANVSPPKTK 76


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = -2

Query: 128 FWNCFPTTISMVQCS-NLKLDFSIRV 54
           FWNC+    S  QCS  L  D   RV
Sbjct: 111 FWNCWNGEASRYQCSPGLAYDREARV 136


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = -2

Query: 128 FWNCFPTTISMVQCS-NLKLDFSIRV 54
           FWNC+    S  QCS  L  D   RV
Sbjct: 111 FWNCWNGEASRYQCSPGLAYDREARV 136


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -1

Query: 408 DIKLLIRYGLVRGGYILIK 352
           DI+ L++Y LVRG  +L++
Sbjct: 286 DIRDLLQYSLVRGVRLLLE 304


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -2

Query: 344 YFILTNNIVNSLCTLFT*KIHQVAVFLRTYYIPTV 240
           Y ILTNN      TL     + V V    YY+  V
Sbjct: 237 YIILTNNQAKYCTTLIGLIKNCVIVIFELYYLSHV 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,006
Number of Sequences: 336
Number of extensions: 3053
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)