Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120307.Seq
(816 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B485B Cluster: PREDICTED: similar to ENSANGP000... 122 1e-26
UniRef50_P24863 Cluster: Cyclin-C; n=66; Eumetazoa|Rep: Cyclin-C... 94 4e-18
UniRef50_UPI0000E4903B Cluster: PREDICTED: similar to cyclin C; ... 84 5e-15
UniRef50_Q9TYP2 Cluster: Cyclin c protein 1; n=2; Caenorhabditis... 67 4e-10
UniRef50_Q5DEL9 Cluster: SJCHGC00487 protein; n=2; Schistosoma j... 56 8e-07
UniRef50_Q554K3 Cluster: Cyclin; n=2; Dictyostelium discoideum|R... 43 0.008
UniRef50_Q2UDB2 Cluster: CDK8 kinase-activating protein cyclin C... 41 0.032
UniRef50_Q0UM03 Cluster: Putative uncharacterized protein; n=1; ... 40 0.057
UniRef50_Q9FJK7 Cluster: Cyclin-C1-2; n=2; Arabidopsis thaliana|... 40 0.099
UniRef50_P93411 Cluster: Cyclin-C1-1; n=3; Magnoliophyta|Rep: Cy... 38 0.40
UniRef50_Q22LY8 Cluster: TLD family protein; n=1; Tetrahymena th... 36 1.2
UniRef50_UPI00006CA72A Cluster: hypothetical protein TTHERM_0084... 34 4.9
UniRef50_A7R5P7 Cluster: Chromosome undetermined scaffold_1021, ... 34 4.9
UniRef50_Q6CAC7 Cluster: Yarrowia lipolytica chromosome D of str... 34 4.9
UniRef50_Q490Z5 Cluster: Sensory transduction protein kinase; n=... 33 8.6
>UniRef50_UPI00015B485B Cluster: PREDICTED: similar to
ENSANGP00000013964; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000013964 - Nasonia
vitripennis
Length = 483
Score = 122 bits (293), Expect = 1e-26
Identities = 58/72 (80%), Positives = 63/72 (87%)
Frame = +2
Query: 2 QIAIGALQIACVMLGKDNLKPWFAELNVDMDKIQEIVRAIINLYEMWKSYDEKKEIQGLL 181
QIAIG LQIACV+L KD LK WFAELN DM+KIQEI R IINLYE+WK+YDEKKEIQ LL
Sbjct: 413 QIAIGCLQIACVILQKD-LKSWFAELNADMEKIQEIARYIINLYELWKTYDEKKEIQALL 471
Query: 182 SKMPKPKPAPQR 217
+KMPKPK APQR
Sbjct: 472 NKMPKPKAAPQR 483
>UniRef50_P24863 Cluster: Cyclin-C; n=66; Eumetazoa|Rep: Cyclin-C -
Homo sapiens (Human)
Length = 303
Score = 93.9 bits (223), Expect = 4e-18
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +2
Query: 5 IAIGALQIACVMLGKDNLKPWFAELNVDMDKIQEIVRAIINLYEMWKSYDEKKEIQGLLS 184
IA+ L +ACV+ KD + WFAEL+VDM+KI EI+R I+ LYE WK++DE+KE+ +LS
Sbjct: 217 IALACLHVACVVQQKD-ARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILS 275
Query: 185 KMPKPKPAP 211
KMPKPKP P
Sbjct: 276 KMPKPKPPP 284
>UniRef50_UPI0000E4903B Cluster: PREDICTED: similar to cyclin C;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to cyclin C - Strongylocentrotus purpuratus
Length = 81
Score = 83.8 bits (198), Expect = 5e-15
Identities = 34/62 (54%), Positives = 49/62 (79%)
Frame = +2
Query: 26 IACVMLGKDNLKPWFAELNVDMDKIQEIVRAIINLYEMWKSYDEKKEIQGLLSKMPKPKP 205
+ACV+ D+ K WFA+LNVD+DKI EI + I+ LY++W++YDEKKEI +L+K+PKP+
Sbjct: 1 MACVISQNDHTKHWFADLNVDLDKILEITQQILKLYDLWENYDEKKEIASVLAKVPKPQT 60
Query: 206 AP 211
P
Sbjct: 61 IP 62
>UniRef50_Q9TYP2 Cluster: Cyclin c protein 1; n=2;
Caenorhabditis|Rep: Cyclin c protein 1 - Caenorhabditis
elegans
Length = 302
Score = 67.3 bits (157), Expect = 4e-10
Identities = 26/74 (35%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Frame = +2
Query: 5 IAIGALQIACVMLGK-DNLKPWFAELNVDMDKIQEIVRAIINLYEMWKSYDEKKEIQGLL 181
I + ++ +A ++G+ + L+ W E++ D +K+ + V I +Y +WKS+DEK+E++ L+
Sbjct: 219 IGLSSIMVAMELMGRGEELEAWLVEVDTDFEKVTDCVEQIYKMYTLWKSFDEKEEVKKLM 278
Query: 182 SKMPKP--KPAPQR 217
+K+PKP +P PQ+
Sbjct: 279 AKLPKPNQQPPPQQ 292
>UniRef50_Q5DEL9 Cluster: SJCHGC00487 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC00487 protein - Schistosoma
japonicum (Blood fluke)
Length = 395
Score = 56.4 bits (130), Expect = 8e-07
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 65 WFAELNVDMDKIQEIVRAIINLYEMWKSYDEKKEIQG-LLSKMPKPKPAP 211
WF+ELNVDM+K+ E+ R ++ LY++W+ +DE E+ LL K+P+P P
Sbjct: 248 WFSELNVDMEKVLEVSRHLLCLYDLWRRFDELAEMPNILLKKLPRPVIQP 297
>UniRef50_Q554K3 Cluster: Cyclin; n=2; Dictyostelium discoideum|Rep:
Cyclin - Dictyostelium discoideum AX4
Length = 255
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 5 IAIGALQIACVMLGKDNLKPWFAELNVDMDKIQEIVRAIINLYEMWK--SYDEKKEIQGL 178
+ +G + + +L KD +K W +ELNV+M I E+ + +I+ YE K S + E+ L
Sbjct: 187 VGLGCILLGSYLLKKD-IKQWLSELNVEMKDIWEVSKDLIDYYEFEKQQSLQNQSELDLL 245
Query: 179 LSKMP 193
+K+P
Sbjct: 246 YNKLP 250
>UniRef50_Q2UDB2 Cluster: CDK8 kinase-activating protein cyclin C;
n=4; Eurotiomycetidae|Rep: CDK8 kinase-activating
protein cyclin C - Aspergillus oryzae
Length = 315
Score = 41.1 bits (92), Expect = 0.032
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 65 WFAELNVDMDKIQEIVRAIINLYEMWKSYDEKKEIQGLLSKMPKPK 202
W AE VD+ + E + +++LYE+W++Y E K + LL +M K K
Sbjct: 253 WLAESEVDIRAVIECTQELVSLYEIWENYSE-KHCKELLGRMVKSK 297
>UniRef50_Q0UM03 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 90
Score = 40.3 bits (90), Expect = 0.057
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 56 LKPWFAELNVDMDKIQEIVRAIINLYEMWKSYDEK 160
L W AE +VD++ + E + +I+LYE+W+SY +K
Sbjct: 39 LVDWLAESSVDIEAVVECTQELISLYEVWESYTDK 73
>UniRef50_Q9FJK7 Cluster: Cyclin-C1-2; n=2; Arabidopsis
thaliana|Rep: Cyclin-C1-2 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 253
Score = 39.5 bits (88), Expect = 0.099
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 5 IAIGALQIACVMLGKDNLKPWFAELNVDMDKIQEIVRAIINLYEMWKSYDEKK 163
I + + IA V KD +K WF EL+VDM+ ++ I I++ YE + + E++
Sbjct: 190 ITLACIYIASVHKEKD-IKTWFEELSVDMNIVKNIAMEILDFYENHRLFTEER 241
>UniRef50_P93411 Cluster: Cyclin-C1-1; n=3; Magnoliophyta|Rep:
Cyclin-C1-1 - Oryza sativa subsp. japonica (Rice)
Length = 257
Score = 37.5 bits (83), Expect = 0.40
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 5 IAIGALQIACVMLGKDNLKPWFAELNVDMDKIQEIVRAIINLYEMWK 145
IA+ + IA V+ KD + WF EL VDM+ ++ I I++ Y+ +K
Sbjct: 189 IALACIYIASVLKDKD-ITLWFEELRVDMNIVKNISMEILDFYDTYK 234
>UniRef50_Q22LY8 Cluster: TLD family protein; n=1; Tetrahymena
thermophila SB210|Rep: TLD family protein - Tetrahymena
thermophila SB210
Length = 439
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -1
Query: 336 SNLIKNSNFFS*GIKNEFFMSTIINYISLYKSILQNMSCYLWGA---GFGLG 190
S L N FF G F + ++ + +YKS LQN +CY+W + GFG G
Sbjct: 337 SGLNPNKGFFGDGECFVFSIPQCMDQLKIYKSTLQN-NCYIWSSKQEGFGFG 387
>UniRef50_UPI00006CA72A Cluster: hypothetical protein
TTHERM_00842570; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00842570 - Tetrahymena
thermophila SB210
Length = 1076
Score = 33.9 bits (74), Expect = 4.9
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2
Query: 77 LNVDMDKIQEIVRAIINLYEMWKSYDEKKEIQGLLSKMPKPKP 205
L +++ KI+E R I L E K Y EKKEIQ LL K + KP
Sbjct: 93 LQMNLSKIEENKRLIQELKEFKKLYFEKKEIQRLL-KQQERKP 134
>UniRef50_A7R5P7 Cluster: Chromosome undetermined scaffold_1021,
whole genome shotgun sequence; n=4; Magnoliophyta|Rep:
Chromosome undetermined scaffold_1021, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 174
Score = 33.9 bits (74), Expect = 4.9
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 5 IAIGALQIACVMLGKDNLKPWFAELNVDMDKIQEIVRAIINLYEMWKSYDEKK 163
IA+ + IA V K+ WF EL VDM+ ++ I I++ Y+ ++ E +
Sbjct: 111 IALACIYIASVHKDKETTA-WFEELRVDMNVVKNISMEILDFYDSHRTITEDR 162
>UniRef50_Q6CAC7 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 280
Score = 33.9 bits (74), Expect = 4.9
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 65 WFAELNVDMDKIQEIVRAIINLYEMWKSYDEKK 163
+F E NVD+++ + V+ +I+LY W +Y EK+
Sbjct: 238 FFGESNVDLEQTIDCVQEMISLYVNWDTYSEKQ 270
>UniRef50_Q490Z5 Cluster: Sensory transduction protein kinase; n=11;
Streptococcus pyogenes|Rep: Sensory transduction protein
kinase - Streptococcus pyogenes serotype M1
Length = 448
Score = 33.1 bits (72), Expect = 8.6
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +2
Query: 284 NSFLIP*EKKLLFLMRLLIFQVIFMNFFNHKQIQCRAHFRHKLKEQQLSYL 436
+S +P KLLFLM +L+ V +++FNH + + +++L+ +Q +Y+
Sbjct: 186 HSLFVPTPYKLLFLMFILLL-VYLLSYFNHSS---KEYLKNELRREQQAYM 232
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,236,636
Number of Sequences: 1657284
Number of extensions: 14150732
Number of successful extensions: 36053
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 34385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36024
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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