Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120306.Seq
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   149   7e-38
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.50 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.50 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   1.2  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.5  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    24   4.7  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.2  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  149 bits (361), Expect = 7e-38
 Identities = 73/95 (76%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
 Frame = +2

Query: 254 KKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 433
           KKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VYDAILEDLVFPAE+VGKRI
Sbjct: 83  KKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFPAEVVGKRI 142

Query: 434 RVKLDGSQLIKVHLDKNQQTTIEHKW-TPSSLYTR 535
           RVKLDGSQLIKVHLDKNQQTTIEHK  T +S+Y +
Sbjct: 143 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKK 177



 Score =  118 bits (284), Expect = 2e-28
 Identities = 54/79 (68%), Positives = 68/79 (86%)
 Frame = +3

Query: 21  TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 200
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 201 PKLKAFQKIQIRLVRELER 257
           PK KAFQK+Q RLVRELE+
Sbjct: 65  PKQKAFQKVQTRLVRELEK 83



 Score = 48.8 bits (111), Expect = 1e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +1

Query: 508 MDTFQSVYKKLTGREVTFEFPEPYL 582
           +DTF SVYKKLTGR+VTFEFPE YL
Sbjct: 168 VDTFASVYKKLTGRDVTFEFPENYL 192


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 20/55 (36%), Positives = 32/55 (58%)
 Frame = +2

Query: 365 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKWTPSSLY 529
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T  + W   S Y
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT-TNLWVEQSWY 85


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 20/55 (36%), Positives = 32/55 (58%)
 Frame = +2

Query: 365 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKWTPSSLY 529
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T  + W   S Y
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT-TNLWVEQSWY 85


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 599 VIG*VYK*GSGNSKVTSRPVSFLYTDWKV 513
           VI  V K G G++  + RP+S L TD+K+
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKL 531


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 447 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRIL 295
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSSS-SSSLSCLLATIVMWC-TGQVL 102


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 516 LPVCIQEANGTRSYLRVPRTLFVNLAYD 599
           LPV  Q+   T     +PRT  V   YD
Sbjct: 46  LPVAYQQKAATSGPFHMPRTEHVGYTYD 73


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +2

Query: 365 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT---IEHKW 511
           L S Y+ ++  +V   + +   +++KL  SQLI V+L     TT   +E  W
Sbjct: 31  LLSNYNKLVRPVVNVTDAL--TVKIKLKLSQLIDVNLKNQIMTTNLWVEQTW 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,618
Number of Sequences: 2352
Number of extensions: 12685
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)