Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120305.Seq
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 110 1e-24
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 110 1e-24
05_01_0043 - 295041-295173,296252-296537,296616-296697 109 2e-24
01_07_0267 + 42410174-42410252,42410679-42411097 104 6e-23
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 100 1e-21
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 50 2e-06
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 33 0.23
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382... 32 0.53
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 30 1.6
01_07_0312 + 42677752-42678561,42678701-42678910,42679597-426797... 30 1.6
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 2.8
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 29 2.8
10_08_0401 + 17629912-17630376 29 3.7
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 3.7
08_02_0341 + 15994817-15994852,15995371-15995439,15995667-159959... 29 3.7
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 29 3.7
09_06_0223 + 21659549-21659729,21659888-21659979 29 4.9
07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520 29 4.9
07_03_0192 + 14935366-14935640,14935769-14935895,14936738-14936959 29 4.9
04_04_1125 + 31085106-31085714 29 4.9
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721... 28 6.5
05_03_0591 + 15892772-15893412,15893478-15893910 28 6.5
03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826 28 6.5
01_07_0171 + 41683670-41683872,41684386-41684483,41684614-416846... 28 6.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.6
09_06_0081 + 20745627-20748144,20748211-20748308 28 8.6
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493... 28 8.6
03_02_0444 - 8543426-8543635,8543945-8544151,8544293-8544400,854... 28 8.6
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 28 8.6
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 110 bits (264), Expect = 1e-24
Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A Y L+ G+ HL +GLA G +GL
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGL 107
Query: 433 AAGFAIGIVGDAGVRGTAQQPR 498
AAG AIGIVGDAGVR AQQP+
Sbjct: 108 AAGMAIGIVGDAGVRANAQQPK 129
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAASA++FS +GAAYGTAKSG G+A+M
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASM 44
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 134 MILILIFAEALALYGLIVGIIL 155
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 126 QQPKLFVGMILILIFAEALALYGLIVGIILS 156
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 51 LVMKSIVPVVMAGVLGIYGLIIAVII 76
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 110 bits (264), Expect = 1e-24
Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A Y L+ G+ HL +GLA G +GL
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGL 107
Query: 433 AAGFAIGIVGDAGVRGTAQQPR 498
AAG AIGIVGDAGVR AQQP+
Sbjct: 108 AAGMAIGIVGDAGVRANAQQPK 129
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASM 44
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 134 MILILIFAEALALYGLIVGIIL 155
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 126 QQPKLFVGMILILIFAEALALYGLIVGIILS 156
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 51 LVMKSIVPVVMAGVLGIYGLIIAVII 76
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 109 bits (263), Expect = 2e-24
Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A Y L+ G+ HL +GLA G +GL
Sbjct: 49 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGL 108
Query: 433 AAGFAIGIVGDAGVRGTAQQPR 498
AAG AIGIVGDAGVR AQQP+
Sbjct: 109 AAGMAIGIVGDAGVRANAQQPK 130
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAASA++FS +GAAYGTAKSG G+A+M
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASM 45
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 135 MILILIFAEALALYGLIVGIIL 156
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 127 QQPKLFVGMILILIFAEALALYGLIVGIILS 157
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 52 LVMKSIVPVVMAGVLGIYGLIIAVII 77
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 104 bits (250), Expect = 6e-23
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Frame = +1
Query: 244 HVGE-RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAV 417
H+G RPEL+MKSI+PVVMAG++ IYGL++AV+I + A Y + G +HL AGLA
Sbjct: 43 HMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIITTGINPTAMPYYHFDGSVHLAAGLAT 102
Query: 418 GFSGLAAGFAIGIVGDAGVRGTAQQPR 498
G LAAG AIG+VGDAGVR AQQP+
Sbjct: 103 GLCALAAGLAIGVVGDAGVRANAQQPK 129
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 131 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
N + PF G +GAA A++FS +GAAYGTA+SG G+A M
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHM 44
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE LGLYGLIV I L
Sbjct: 134 MILILIFAEALGLYGLIVGIIL 155
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 51 LVMKSIVPVVMAGVLGIYGLIIAVII 76
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 100 bits (240), Expect = 1e-21
Identities = 47/75 (62%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A Y L+ G+ HL +GLA G +GL
Sbjct: 50 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGL 109
Query: 433 AAGFAIGIVGDAGVR 477
AAG AIGIVGDAGVR
Sbjct: 110 AAGMAIGIVGDAGVR 124
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASM 46
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 168 MILILIFAEALALYGLIVGIIL 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 187 LQRLGSCLWNCQVRNWYC-RHVGERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
+QR L+ C + C R ++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 137 VQRHVYVLFKCLAEIFKCLRANAQQPKLFVGMILILIFAEALALYGLIVGIILS 190
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 53 LVMKSIVPVVMAGVLGIYGLIIAVII 78
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Frame = +1
Query: 259 PELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEP----ANYP--LYKGFIHLGAGLAVG 420
P + K++I V+ +AIYG++VA+++ L+ ++P L G+ +GL VG
Sbjct: 55 PRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPTALVHHPESLRAGYAIFASGLIVG 114
Query: 421 FSGLAAGFAIGIVGDAGVRGTAQ 489
F+ L G +GI+G + AQ
Sbjct: 115 FANLVCGVCVGIIGSSCALSDAQ 137
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 33.1 bits (72), Expect = 0.23
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = -3
Query: 537 LQRK*E*ESFDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWL 358
L+ K DE P LS+T C H+ YG+ G + + ++ VD P+V G+V
Sbjct: 878 LEEKCSKNEHDEAPLGLSNT---CKEHE-YGDKGPENLTKPGEPASSVDVPYVNGIVD-N 932
Query: 357 LEGTSNQDSHDQTVDGNNTRHDD 289
+ + S + TV T + D
Sbjct: 933 SDSVQEEPSVEATVSATETSNVD 955
>07_03_1215 +
24937016-24937229,24937418-24937623,24938135-24938207,
24938619-24938812
Length = 228
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 452 PMAKPAARPENPTAKPAPKWM 390
P AKPAA+P+ P KP P+ M
Sbjct: 91 PAAKPAAKPKKPPVKPLPEMM 111
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 414 SQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDR 286
S+ ++ E KG+VG SNQ HD T D +T D++
Sbjct: 190 SRLDNKIAEVDTKGIVG-TKPSASNQHQHDGTTDSRHTVEDEK 231
>01_07_0312 +
42677752-42678561,42678701-42678910,42679597-42679704,
42679915-42680010,42680090-42680182,42680276-42680386,
42680482-42680514,42680592-42680642,42680960-42681037,
42681145-42681165
Length = 536
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 581 CVQVDGDDKSVKTQYFSENKNKNHSTNN-LGC*AVPRTPASPTMPMAKPAARPENPTAKP 405
C+QV G + + Q + N+ K+ +NN L A + ++ P KP P +
Sbjct: 122 CIQVQGGVSNREAQAATTNRQKHTKSNNSLSTRATTKLRSATNTPCQKPTTAPSSNGNTA 181
Query: 404 APK 396
PK
Sbjct: 182 PPK 184
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 381
P PA MP P P PT P P W PL
Sbjct: 132 PPPPARTPMPTPTPTPTP-TPTRPPVPVWAAPL 163
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 345 WCPPGASQLPPLQRVHPLG 401
W PPG +LPPL +H G
Sbjct: 44 WAPPGEPRLPPLLLIHGFG 62
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 161 VMGAASAIIFSALGAAYGTAKSGTGIAA 244
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 485 AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 381
A P P P P PAA P P PAP+ P+
Sbjct: 219 APPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPM 253
>08_02_0341 +
15994817-15994852,15995371-15995439,15995667-15995973,
15996231-15996253
Length = 144
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 351 GTSNQDSHDQTVDGNNTRHDDRNDRL 274
G + + HD ++DG N +DD D L
Sbjct: 98 GAEDDNGHDVSIDGLNANNDDNGDEL 123
>03_06_0209 -
32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 343 AGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 477
+GA EP P+ + G A+ F G AG A+G+VG++G R
Sbjct: 9 SGAAAEPPPTPVAR----YDRGGALIFGGRFAGVAVGVVGESGSR 49
>09_06_0223 + 21659549-21659729,21659888-21659979
Length = 90
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 684 YRRRPSLCASSDSDNEHRGSEHGRRE 607
++RR S DNE +G +HGRRE
Sbjct: 35 WQRRKRDTNGSGKDNEGKGGQHGRRE 60
>07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520
Length = 568
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = -1
Query: 665 CARLQTQIMSIEA--RSTGDGSGVCSGR 588
C+R++TQ+ ++A R+TG G G +GR
Sbjct: 529 CSRMKTQMSKMKAARRATGGGGGAAAGR 556
>07_03_0192 + 14935366-14935640,14935769-14935895,14936738-14936959
Length = 207
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 211 WN--CQVRNWYCRHVGERPELIMKSIIPVVMAGIIAIYGL 324
WN C V +CRH+G L + + I +V+ + Y L
Sbjct: 163 WNKICNVYGKFCRHIGSSTFLALIAAIVLVLLAFLNAYSL 202
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAK 408
P TPA+PT P PA P PT K
Sbjct: 89 PATPATPTTP-PTPAPAPSTPTGK 111
>12_01_0790 +
7216452-7216489,7216664-7216722,7217268-7218750,
7218828-7218892,7219023-7219080,7219152-7219262,
7219332-7219410,7219521-7219613,7219701-7219886
Length = 723
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -1
Query: 542 QYFSENKNKNHSTNNLGC*AVPRTPASPTMP--MAKPAARPENPTAKPAPKWMNPL*RG* 369
Q+ +KN + G PR P SP+ P +A+P P +P P +PL
Sbjct: 234 QFILWHKNDIELGSTDGTDRPPRIPVSPSHPPVVARPRDSPIASPPRPEPPVASPLGPKP 293
Query: 368 LAGSWRAP 345
L S R P
Sbjct: 294 LVASSRGP 301
>05_03_0591 + 15892772-15893412,15893478-15893910
Length = 357
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 603 CVFRAFILCTGRWRR*VRKDPILQRK 526
C RA ++C RWRR + DP QR+
Sbjct: 28 CAVRASLVCK-RWRRLLTDDPCFQRR 52
>03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826
Length = 196
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 391 IHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 495
+HL G+AVG GL G + GD R A+ P
Sbjct: 160 VHLDVGVAVGDQGLEVGLL--VAGDEAERAQARAP 192
>01_07_0171 +
41683670-41683872,41684386-41684483,41684614-41684692,
41684845-41685000,41685021-41685146,41686249-41686540,
41686978-41687053,41687295-41687392,41687523-41687665,
41688522-41688579,41689055-41689213,41689291-41689343,
41689978-41690212,41690317-41690403,41690607-41690711
Length = 655
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -1
Query: 530 ENKNKNHSTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAPK 396
+ N +H NN+ + T + P+ + +P NP K +P+
Sbjct: 255 DTSNASHKLNNICMTSFVETSSGPSRAIGRPKTSIANPATKTSPE 299
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAPKWM 390
P PA P P AA NP A P P M
Sbjct: 727 PSAPAPPLPPPLPAAANKRNPPAPPPPPLM 756
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 485 AVPRTPASPTMPMAKPAARPENPTAKPA 402
A PR P P A PAA P P+ P+
Sbjct: 714 ATPRAPTPPAAAAAAPAAPPALPSGLPS 741
>05_05_0070 +
22148595-22148907,22148988-22149104,22149196-22149350,
22149987-22150061,22150179-22150469,22150942-22151292,
22151390-22151794
Length = 568
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 264 ADHEVDHSCRHGGYYCHLRSGRGCPDCWCPP 356
AD D CR G SG + +CPP
Sbjct: 24 ADSSADEECRRGSSSSSASSGDASSESYCPP 54
>03_02_0444 -
8543426-8543635,8543945-8544151,8544293-8544400,
8544744-8544803,8544914-8544989,8545190-8545347,
8545479-8545541,8545653-8545737,8546423-8547438
Length = 660
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Frame = -1
Query: 704 PMQGGPATGDDHPCARLQTQIMSIEARSTGDGSGVCSGRLFC--VQVDG-DDKSVKTQYF 534
P PA+G + R G G G +L C + + G DD +V +
Sbjct: 48 PAASAPASGSPSLACSPACSLDLTSFRIGGSGDGCRDVQLLCSSLGLSGVDDFAVPVADW 107
Query: 533 SENKNKNHSTNNLGC*AVPRT-PASPTMPMAKPAARPENPTAKPAP 399
+K S ++ PR P + P+ + A E P + PAP
Sbjct: 108 EAHKAGRSSFSSSASTPKPREEPPARDSPVRREVAAEEEPPSLPAP 153
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 447 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 343
G G S+T VD+P VVGW GTS
Sbjct: 4 GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,743,425
Number of Sequences: 37544
Number of extensions: 539882
Number of successful extensions: 2119
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2110
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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