Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120305.Seq
(722 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 109 2e-24
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 109 2e-24
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 109 2e-24
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 109 2e-24
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 109 2e-24
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 52 4e-07
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 52 4e-07
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 31 0.58
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 31 0.77
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 30 1.4
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 1.8
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 29 2.4
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 29 2.4
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 3.1
At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein / c... 29 4.1
At4g15610.1 68417.m02381 integral membrane family protein contai... 29 4.1
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 4.1
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 28 5.5
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 28 5.5
At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family pr... 28 7.2
At4g36550.1 68417.m05190 U-box domain-containing protein low sim... 28 7.2
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 7.2
At2g29050.1 68415.m03531 rhomboid family protein contains PFAM d... 28 7.2
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 27 9.5
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 27 9.5
At2g17820.1 68415.m02064 histidine kinase 1 99% identical to GP:... 27 9.5
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 109 bits (262), Expect = 2e-24
Identities = 50/82 (60%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGL 106
Query: 433 AAGFAIGIVGDAGVRGTAQQPR 498
+AG AIGIVGDAGVR AQQP+
Sbjct: 107 SAGMAIGIVGDAGVRANAQQPK 128
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASM 43
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 133 MILILIFAEALALYGLIVGIIL 154
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 125 QQPKLFVGMILILIFAEALALYGLIVGIILS 155
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 50 LVMKSIVPVVMAGVLGIYGLIIAVII 75
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 109 bits (262), Expect = 2e-24
Identities = 50/82 (60%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGL 106
Query: 433 AAGFAIGIVGDAGVRGTAQQPR 498
+AG AIGIVGDAGVR AQQP+
Sbjct: 107 SAGMAIGIVGDAGVRANAQQPK 128
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASM 43
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 133 MILILIFAEALALYGLIVGIIL 154
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 125 QQPKLFVGMILILIFAEALALYGLIVGIILS 155
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 50 LVMKSIVPVVMAGVLGIYGLIIAVII 75
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 109 bits (262), Expect = 2e-24
Identities = 50/82 (60%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGL 106
Query: 433 AAGFAIGIVGDAGVRGTAQQPR 498
+AG AIGIVGDAGVR AQQP+
Sbjct: 107 SAGMAIGIVGDAGVRANAQQPK 128
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASM 43
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 133 MILILIFAEALALYGLIVGIIL 154
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 125 QQPKLFVGMILILIFAEALALYGLIVGIILS 155
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 50 LVMKSIVPVVMAGVLGIYGLIIAVII 75
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 109 bits (262), Expect = 2e-24
Identities = 50/82 (60%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL
Sbjct: 49 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGL 108
Query: 433 AAGFAIGIVGDAGVRGTAQQPR 498
+AG AIGIVGDAGVR AQQP+
Sbjct: 109 SAGMAIGIVGDAGVRANAQQPK 130
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M
Sbjct: 13 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASM 45
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 135 MILILIFAEALALYGLIVGIIL 156
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 127 QQPKLFVGMILILIFAEALALYGLIVGIILS 157
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 52 LVMKSIVPVVMAGVLGIYGLIIAVII 77
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 109 bits (262), Expect = 2e-24
Identities = 50/82 (60%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGL 432
RPEL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGL 107
Query: 433 AAGFAIGIVGDAGVRGTAQQPR 498
+AG AIGIVGDAGVR AQQP+
Sbjct: 108 SAGMAIGIVGDAGVRANAQQPK 129
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +2
Query: 149 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM 247
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M
Sbjct: 12 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASM 44
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 510 MILILIFAEVLGLYGLIVAIYL 575
MILILIFAE L LYGLIV I L
Sbjct: 134 MILILIFAEALALYGLIVGIIL 155
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIA 345
++P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 126 QQPKLFVGMILILIFAEALALYGLIVGIILS 156
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 498 VIRRMILILIFAEVLGLYGLIVAIYL 575
++ + I+ ++ A VLG+YGLI+A+ +
Sbjct: 51 LVMKSIVPVVMAGVLGIYGLIIAVII 76
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYK------GFIHLGAGLA 414
E P + K++I V+ +AIYG++VA+++ L+ + +Y G+ +G+
Sbjct: 58 EAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGII 117
Query: 415 VGFSGLAAGFAIGIVGDAGVRGTAQ 489
VGF+ L G +GI+G + AQ
Sbjct: 118 VGFANLVCGLCVGIIGSSCALSDAQ 142
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +1
Query: 253 ERPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYK------GFIHLGAGLA 414
E P + K++I V+ +AIYG++VA+++ L+ + +Y G+ +G+
Sbjct: 56 EAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGII 115
Query: 415 VGFSGLAAGFAIGIVGDAGVRGTAQ 489
VGF+ L G +GI+G + AQ
Sbjct: 116 VGFANLVCGLCVGIIGSSCALSDAQ 140
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAP 399
P+ +PT P KPA P P KPAP
Sbjct: 53 PKPKPAPTPPKPKPAPAPTPPKPKPAP 79
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL*RG*LAGSWRAPAIRTATTRP*MAIIP 300
P+ +PT P KP P P KPAP P + A + P + A T P P
Sbjct: 42 PKPTPAPTPPKPKPKPAPTPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTP 101
Query: 299 AMT 291
A T
Sbjct: 102 APT 104
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAP 399
P+ +PT P KP P P KPAP
Sbjct: 86 PKPKPAPTPPNPKPTPAPTPPKPKPAP 112
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAP 399
P+ +PT P KP P P KP P
Sbjct: 31 PKPAPAPTPPKPKPTPAPTPPKPKPKP 57
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAPK 396
P+ +PT P KPA P PT P PK
Sbjct: 97 PKPTPAPTPPKPKPAPAPA-PTPAPKPK 123
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 31.1 bits (67), Expect = 0.77
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -1
Query: 707 NPMQGGPATGDDHPCARLQTQIMS---IEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQY 537
NP++ D HP + QI+ IE RST S S R VQVD +D +
Sbjct: 289 NPVESSDVETDKHPIESKEIQIVDKSVIEERSTSTAS---SSRFINVQVDDEDDDDADDW 345
Query: 536 FSENKNKNHS 507
++ + + S
Sbjct: 346 LNDEETSSVS 355
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAP 399
P A P MPMA P P P+ P+P
Sbjct: 78 PMPMAPPPMPMASPPMMPMTPSTSPSP 104
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAPKWMNP 384
P TP PT P P + P+ PT KP P P
Sbjct: 125 PSTPKPPTKP---PPSTPKPPTTKPPPSTPKP 153
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAP 399
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 479 PRTPASPTMPMAKPAARPENPTAKPAP 399
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -1
Query: 482 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 381
VP TP PT P+ KP+ P P KP+P P+
Sbjct: 431 VPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPV 469
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -1
Query: 482 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 381
VP TP PT P+ KP+ P P +P+P P+
Sbjct: 442 VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPV 480
>At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein /
cellulase family protein predicted protein F3F19.15 -
Arabidopsis thaliana, EMBL:AC007357
Length = 526
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -1
Query: 722 RRVLRNPMQGGPATGDDHPCARLQTQIMSIEARSTGDGSGVCSGRLFCVQVDGDDKSV 549
RR ++ ++G A G R+ T+I I A G L C+ VD D+ V
Sbjct: 446 RRGHKSCLEGETAVGKSVKLGRICTKIEQISATKMHLSFNTSDGSLVCLDVDSDNNVV 503
>At4g15610.1 68417.m02381 integral membrane family protein contains
TIGRFAM TIGR01569 : plant integral membrane protein
TIGR01569; contains Pfam PF04535 : Domain of unknown
function (DUF588)
Length = 193
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 166 GGGVCY-HLQRLGSCLWN--CQVRNWYCRHVGERPELIMKSIIPVVMAGIIAIYGL 324
GGGV Y L+ W C + + +CRHVG + + + + +++ II++ L
Sbjct: 133 GGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSL 188
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 485 AVPRTPASPTMPMAKPAARPENPTAKPAP 399
A P TP + P P PE+P + PAP
Sbjct: 132 APPTTPITSPSPPTNPPPPPESPPSLPAP 160
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 544 VFTDLSSPSTCTQNKRPEHTPLPSP 618
+F L++ + C N P+H P+PSP
Sbjct: 18 IFFTLTAATDCGCNPSPKHKPVPSP 42
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 396 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHD 268
VD +V G+ G+ LE + + D D ++ HD +D HD
Sbjct: 283 VDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDHDHHHDHNHD 325
>At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 707
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 531 AEVL-GLYGLIVAIYLYXXXXXXXXXXXVARAPSLYAHYLSLKTRTGMVVAGSGSTLHRV 707
AE L GL L ++ Y R PS + LSL+ T V+ SG T RV
Sbjct: 209 AEYLDGLISLTTQMHEYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERV 268
>At4g36550.1 68417.m05190 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 577
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 476 RTPASPTMPMAKPAARPENPTAKPAPK 396
RT ASPT + P PE P+PK
Sbjct: 534 RTTASPTSQVVTPVTHPEPVKITPSPK 560
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -3
Query: 447 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHD 268
G+ E+ S+Q+ +P + + ++ N H Q VD NN DDR++ D
Sbjct: 8 GQVNLSGLETTPPGSSQLKKPDLHISMNMAMDSGHNNHHHHQEVD-NNNNDDDRDNLSGD 66
Query: 267 QLRP 256
P
Sbjct: 67 DHEP 70
>At2g29050.1 68415.m03531 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 389
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 178 CYHLQRLGSCLWNCQVRNWYCR--HVGERPEL 267
C++L + + LW+C+ +N YC +G++ L
Sbjct: 328 CHYLSCIPTSLWSCKSQNVYCESSQIGQQMNL 359
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = +3
Query: 171 RRLLSSSAPWELPMELPSQELVLPPCR*EA*ADHEVDHSCRHGGY------YCHLRSGRG 332
R LLS +P +P+ PS ++P + SC GG Y H+RS
Sbjct: 27 RFLLSVDSPPHIPLLRPSSNTLIPSSS----FSRRIWDSCSGGGGGGGGDDYDHIRSDVN 82
Query: 333 CPDC 344
CP C
Sbjct: 83 CPRC 86
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 479 PRTPASPTMP--MAKPAARPENPTAKPAPKWM 390
P+ PA P P + P P+ PT KP P ++
Sbjct: 42 PKHPAKPPKPPTVKPPTHTPKPPTVKPPPPYI 73
>At2g17820.1 68415.m02064 histidine kinase 1 99% identical to
GP:4586626
Length = 1207
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -3
Query: 468 CISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGT-SNQDSHDQTVDGNNTRHD 292
C S D+ ET + + S + + P +K +L++ T SN DS ++ N +
Sbjct: 966 CSSDDS-SETSGEKQVDKSVKPSTLHSPVLKN---YLIDATTSNDDSTSASMTQKNPEEE 1021
Query: 291 DRNDRLH 271
D DRL+
Sbjct: 1022 DWKDRLY 1028
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,336,691
Number of Sequences: 28952
Number of extensions: 386376
Number of successful extensions: 1348
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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