Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120304.Seq
         (794 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 222 FIIITLKFNSLIFNLICFNLGILFFLCLTSLGVYIVII 335
           FII T+         I FN+ +LF LCL    ++++ +
Sbjct: 173 FIIFTMHL-LFCCAFIFFNMHLLFLLCLDYFTLHLLFL 209



 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 219 YFIIITLKFNSLIFNLICFNLGILFFLCL 305
           Y  II L      +  I F + +LF LC+
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFLLCI 133


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 637 PPLLYSILNPETNSLSPSAKSKGVRFVSAN 548
           PP+   I+NP+    SPS  +      ++N
Sbjct: 410 PPMQSQIINPQPQITSPSNTNTSTSSTNSN 439


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 615 NIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFF 737
           N+E  R  F  +F++ +  +LF   +L I+ +    + FFF
Sbjct: 290 NLEQSRY-FIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFF 329


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 615 NIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFF 737
           N+E  R  F  +F++ +  +LF   +L I+ +    + FFF
Sbjct: 290 NLEQSRY-FIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFF 329


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 615 NIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFF 737
           N+E  R  F  +F++ +  +LF   +L I+ +    + FFF
Sbjct: 290 NLEQSRY-FIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFF 329


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 615 NIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFF 737
           N+E  R  F  +F++ +  +LF   +L I+ +    + FFF
Sbjct: 290 NLEQSRY-FIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFF 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,887
Number of Sequences: 336
Number of extensions: 1454
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)