Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120303.Seq
         (856 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-P...    29   6.2  
AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-P...    29   6.2  
AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-P...    29   6.2  

>AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-PB,
           isoform B protein.
          Length = 4106

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 847 PNLFGLIEELHKQIKISFGLNMTGVTN 767
           P L G++E LH+ +  S GL  +G+T+
Sbjct: 94  PELSGILENLHQNLGSSLGLPQSGITS 120


>AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-PC,
           isoform C protein.
          Length = 4061

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 847 PNLFGLIEELHKQIKISFGLNMTGVTN 767
           P L G++E LH+ +  S GL  +G+T+
Sbjct: 94  PELSGILENLHQNLGSSLGLPQSGITS 120


>AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-PA,
           isoform A protein.
          Length = 4019

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 847 PNLFGLIEELHKQIKISFGLNMTGVTN 767
           P L G++E LH+ +  S GL  +G+T+
Sbjct: 94  PELSGILENLHQNLGSSLGLPQSGITS 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,090,466
Number of Sequences: 53049
Number of extensions: 472753
Number of successful extensions: 682
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)