Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120300.Seq
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           28   0.36 
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    24   5.9  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    24   5.9  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 15/62 (24%), Positives = 32/62 (51%)
 Frame = +3

Query: 42  KRLQVMIEYIKRTNADEPTPNVIGYVSDITQNTYTVTWFNTVDLSTYQESVHDDRNEIFD 221
           + L+++I  I + + ++   N    +   T +T  + WF  V  +  Q S+ +DR  +F+
Sbjct: 735 RELELLISGISKIDVNDWKANT--RLKQCTADTPQIVWFWQVSSTDLQLSMSEDRLHVFN 792

Query: 222 FL 227
           +L
Sbjct: 793 WL 794


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 477 IILATNTCIIPVLS*VFCKRSARSRRMSRQLH 572
           +  +TN+C+ PV+  VF  R   ++++ +  H
Sbjct: 311 LFASTNSCMNPVVYGVFNVRKKHTKKLLKTTH 342


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 477 IILATNTCIIPVLS*VFCKRSARSRRMSRQLH 572
           +  +TN+C+ PV+  VF  R   ++++ +  H
Sbjct: 311 LFASTNSCMNPVVYGVFNVRKKHTKKLLKTTH 342


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,318
Number of Sequences: 2352
Number of extensions: 18594
Number of successful extensions: 70
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)