Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120299.Seq
(787 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25695 Cluster: Uncharacterized 41.5 kDa protein in P6.... 297 3e-79
UniRef50_Q8V5R3 Cluster: ORF92; n=4; Nucleopolyhedrovirus|Rep: O... 121 2e-26
UniRef50_Q9J871 Cluster: ORF64; n=5; Nucleopolyhedrovirus|Rep: O... 105 9e-22
UniRef50_Q0IL13 Cluster: ORF106; n=2; Nucleopolyhedrovirus|Rep: ... 104 3e-21
UniRef50_Q80LL9 Cluster: Budded virus/occlusion-derived virus st... 96 8e-19
UniRef50_Q9YMM5 Cluster: LdOrf-102 peptide; n=1; Lymantria dispa... 80 5e-14
UniRef50_A0EYY3 Cluster: P40; n=4; Nucleopolyhedrovirus|Rep: P40... 67 4e-10
UniRef50_Q9DVW7 Cluster: PxORF66 peptide; n=1; Plutella xylostel... 43 0.010
UniRef50_Q9PYV0 Cluster: ORF93; n=2; Granulovirus|Rep: ORF93 - X... 40 0.071
UniRef50_UPI00006CC429 Cluster: hypothetical protein TTHERM_0013... 34 3.5
UniRef50_Q73KV2 Cluster: HAMP domain protein; n=1; Treponema den... 34 3.5
UniRef50_A6RB05 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q22UP1 Cluster: ATPase, histidine kinase-, DNA gyrase B... 33 8.1
UniRef50_O77347 Cluster: Zinc finger protein, putative; n=4; Pla... 33 8.1
>UniRef50_P25695 Cluster: Uncharacterized 41.5 kDa protein in
P6.9-VP48 intergenic region; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 41.5 kDa
protein in P6.9-VP48 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 361
Score = 297 bits (728), Expect = 3e-79
Identities = 167/258 (64%), Positives = 186/258 (72%), Gaps = 13/258 (5%)
Frame = +1
Query: 28 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQN 207
MSAIALYLEINKLRLKIDEPMQLAIWPQ+FPLLCDEHQ+VQLNTDVLINF+MHVARKSQN
Sbjct: 1 MSAIALYLEINKLRLKIDEPMQLAIWPQLFPLLCDEHQSVQLNTDVLINFMMHVARKSQN 60
Query: 208 TILNNNAAIASQYAAGTRASSSQRQVPPILRRVP**ICLREPTPSR-LRTFRRADQHAPI 384
TILNNNAAIASQYAAG ++ P +PTP + F RA+ AP
Sbjct: 61 TILNNNAAIASQYAAG----NADVVAAP---------ASAQPTPRPVINLFARANAAAPA 107
Query: 385 QKCCSQTNPSLFVEQHQ---FYRIQNQRRGHDHDIFAAIGKVSFV---------FKLLET 528
Q N + + + N ++ I + + F+ FKLLET
Sbjct: 108 QPSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKYHSLFKLLET 167
Query: 529 TFDDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNSPIMKYAKI 708
TFDDYTCRPQMTQVQTDTLLDAVRSLLEMPSTT+DLTTVDIMRSSFARCFNSPIM+YAKI
Sbjct: 168 TFDDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTIDLTTVDIMRSSFARCFNSPIMRYAKI 227
Query: 709 VLLQNVASQRDQRTTLEE 762
VLLQNVA QRD+RTTLEE
Sbjct: 228 VLLQNVALQRDKRTTLEE 245
Score = 109 bits (263), Expect = 6e-23
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +2
Query: 353 PSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKYHS 508
PSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKYHS
Sbjct: 109 PSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKYHS 160
Score = 41.5 bits (93), Expect = 0.023
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 294 PTPRPVINLFARANAVAPA 350
PTPRPVINLFARANA APA
Sbjct: 89 PTPRPVINLFARANAAAPA 107
>UniRef50_Q8V5R3 Cluster: ORF92; n=4; Nucleopolyhedrovirus|Rep:
ORF92 - Helicoverpa zea SNPV
Length = 369
Score = 121 bits (292), Expect = 2e-26
Identities = 77/258 (29%), Positives = 134/258 (51%), Gaps = 13/258 (5%)
Frame = +1
Query: 28 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQN 207
MS + L+LEI ++ KID M ++IWP+ FPLL D + + L D L++F++ AR ++
Sbjct: 1 MSGVMLFLEIENMKNKIDRRMNMSIWPKFFPLLVDANATLDLTLDELVDFLVTTARIAEI 60
Query: 208 TILNNNAAIASQYAAGTRASSSQRQVPPILRRVP**ICLREPTPSRLRTFRRADQHAPIQ 387
+NNAA+ASQY +++ + P + R+P+ L R P Q
Sbjct: 61 DRTDNNAALASQYTYPPSNTNNTQTSPTVEVSAQ-----RQPSRGNLLNLFRTT--LPEQ 113
Query: 388 KCCSQTNPSLF------VEQHQFYRIQNQRRGHDHDIFAAI------GKVSFVFKLLETT 531
+ +N ++ + QH + DI A + + +F+LLETT
Sbjct: 114 QNHVSSNLTMLRSCCQRLLQHYTLNSTTSNEFYVKDIVACMIYLNKTPQYKPLFQLLETT 173
Query: 532 F-DDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNSPIMKYAKI 708
+DY C P M+ + ++ +++LLE+P++ +D T V +++ + R N PI ++ KI
Sbjct: 174 MSEDYECMPAMSPIDMQNIVALLKNLLELPTSIIDFTNVKMLKITLGRVMNYPISRFPKI 233
Query: 709 VLLQNVASQRDQRTTLEE 762
+L+Q+ RD+R T+EE
Sbjct: 234 MLMQSSKLTRDKRCTIEE 251
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +2
Query: 371 NMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKY 502
N+ R+ ++L+ HY+LNST+S E+ + D+V MI+L ++ +Y
Sbjct: 120 NLTMLRSCCQRLLQHYTLNSTTSNEFYVKDIVACMIYLNKTPQY 163
>UniRef50_Q9J871 Cluster: ORF64; n=5; Nucleopolyhedrovirus|Rep:
ORF64 - Spodoptera exigua MNPV
Length = 388
Score = 105 bits (253), Expect = 9e-22
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 5/250 (2%)
Frame = +1
Query: 28 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQN 207
MS++ L+LEI +++ KID M +AIWP+ FPLL D ++ L+ F++ VA+ ++
Sbjct: 1 MSSVMLFLEIERIKNKIDSEMNMAIWPKFFPLLADPDGHINLSLSEFQQFLVTVAQMART 60
Query: 208 TILNNNAAIASQYAAGTRAS--SSQRQVPPILRRVP**ICLREPTPSRLRTFRRAD--QH 375
+ NNAA+AS T ++ +S P R + S R D
Sbjct: 61 AQIENNAALASAARDNTMSTTMTSSTATPSPPRNILNLFGGGGVASSSRRKDAAVDSVNM 120
Query: 376 APIQKCCSQTNPSLFVEQHQFYRIQNQRRGHDHDIFAAIGKVSFVFKLLETTF-DDYTCR 552
A +K C + + + A K ++ LL+ + ++Y C
Sbjct: 121 ATFRKNCQKLIKHYTLSNTSSSEFKVADIVSCMVYLAKSPKFKPLYSLLQLSMTEEYDCM 180
Query: 553 PQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNSPIMKYAKIVLLQNVAS 732
P T + ++D ++SLL++P++ +D ++V I++S+F + N PI ++A++++L +
Sbjct: 181 PSYTADEMHHIVDLIKSLLDLPTSLIDFSSVKILKSTFNKAMNYPITRFARVMILPTTSL 240
Query: 733 QRDQRTTLEE 762
D+R T+EE
Sbjct: 241 VSDKRCTIEE 250
Score = 56.4 bits (130), Expect = 8e-07
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 320 VCASQRRRACAPSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEK 499
V +S RR+ A +NM +R +KLI HY+L++TSS+E+K++D+V M++L +S K
Sbjct: 104 VASSSRRKDAAVDS--VNMATFRKNCQKLIKHYTLSNTSSSEFKVADIVSCMVYLAKSPK 161
Query: 500 Y 502
+
Sbjct: 162 F 162
>UniRef50_Q0IL13 Cluster: ORF106; n=2; Nucleopolyhedrovirus|Rep:
ORF106 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 382
Score = 104 bits (249), Expect = 3e-21
Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Frame = +1
Query: 28 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQN 207
MS++ L+LEI L+ KID+ M + IWP+ FPLL D ++QL D + +F++ AR S+
Sbjct: 1 MSSVMLFLEIENLKNKIDKRMNMGIWPKFFPLLVDPQASIQLTIDEINDFLVTTARVSEI 60
Query: 208 TILNNNAAIASQYA----AGTRASSSQRQVPP--ILRRVP**I--CLREPTPSRLRTFRR 363
+N AI SQ+A G A PP + I ++PT R+
Sbjct: 61 DRTESNVAITSQFANAIGGGGAAIVPPAAAPPPAVQPSAAAGIFNIFKQPTTQSNRSALS 120
Query: 364 ADQHAPIQKCCSQTNPSLFVEQHQFYRIQNQRRGHDHDIFAAI------GKVSFVFKLLE 525
+ A Q+ C + + Q+ D+ A + + +F LL
Sbjct: 121 SADSASFQRKCQK------ILQYYTSAGTTSTDFKISDLVACMVFLSNSSRFRALFNLLR 174
Query: 526 TTF-DDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNSPIMKYA 702
T+ DY C P + V+ L+DA+R L M + +V+ + +++ + + N PI KY
Sbjct: 175 TSMTSDYECMPPLGDVEVQNLIDALRELTGMTAYSVNFEALRMLKVTLGKVMNYPIAKYP 234
Query: 703 KIVLLQNVASQRDQRTTLEE 762
++V+ + + DQ+T+LEE
Sbjct: 235 RVVIAETYRASHDQQTSLEE 254
Score = 42.3 bits (95), Expect = 0.013
Identities = 16/53 (30%), Positives = 34/53 (64%)
Frame = +2
Query: 383 YRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKYHSCSNCSKPRLTT 541
++ +K++ +Y+ T+ST++KISD+V M+FL S ++ + N + +T+
Sbjct: 127 FQRKCQKILQYYTSAGTTSTDFKISDLVACMVFLSNSSRFRALFNLLRTSMTS 179
>UniRef50_Q80LL9 Cluster: Budded virus/occlusion-derived virus
structural protein; n=1; Adoxophyes honmai NPV|Rep:
Budded virus/occlusion-derived virus structural protein
- Adoxophyes honmai nucleopolyhedrovirus
Length = 364
Score = 96.3 bits (229), Expect = 8e-19
Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Frame = +1
Query: 28 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQN 207
MS + L+LEI KL+ KID+ MQ+ IWP+ FPLL + + + L+ L F+ + AR +
Sbjct: 1 MSEVMLFLEIEKLKNKIDKEMQMDIWPKFFPLLSNPNATLNLSMQDLFEFLENTARHAAL 60
Query: 208 TILNNNAAIASQYAAGTRASSSQRQVPPILRRVP**ICLREPTPSRLRTFRRADQHAPIQ 387
++AA+AS + ++ +R + + S +T +
Sbjct: 61 HNDTDSAALASGLLSNRPVTNDDNDTTTQHQRRRNLLNFKTLRNSNDKTLVNIQNLNEYR 120
Query: 388 KCCSQTNPSLFVEQHQFYRIQNQRRGHD--HDIFAAI------GKVSFVFKLLE-TTFDD 540
K C ++ Q+Y ++N +DI A+ K ++ LE F +
Sbjct: 121 KRC--------IKVLQYYTMRNTTTVDFKINDIVTAMIYLAITPKYKPLYVYLEGVMFSE 172
Query: 541 YTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNSPIMKYAKIVLLQ 720
C P +T+ L++ +RS+++MP+TTVD TV ++R + + N P+ +Y ++++
Sbjct: 173 TDCAPVITEELAHNLINLLRSIMDMPTTTVDAETVKLLRITLNKTMNYPVARYPRVLVTL 232
Query: 721 NVASQRDQRTTLEE 762
N + +D+R TLEE
Sbjct: 233 NSSLNQDKRRTLEE 246
Score = 42.3 bits (95), Expect = 0.013
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +2
Query: 371 NMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKY 502
N+ YR K++ +Y++ +T++ ++KI+D+V MI+L + KY
Sbjct: 115 NLNEYRKRCIKVLQYYTMRNTTTVDFKINDIVTAMIYLAITPKY 158
>UniRef50_Q9YMM5 Cluster: LdOrf-102 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-102 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 381
Score = 80.2 bits (189), Expect = 5e-14
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 21/273 (7%)
Frame = +1
Query: 28 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNT--DVLINFIMHVARKS 201
M+A+ L+ EI LR +ID MQ+ +W ++F LLCD +L+ + I + VA S
Sbjct: 1 MTAVNLFNEIVNLRDRIDPQMQMDVWLRLFRLLCDNGHRAELDLPYEEFIELLTIVASAS 60
Query: 202 QNTILNNNAAIASQY----------AAGTRASSSQRQVPPILRRVP**ICLREPTPSRLR 351
+N + +NAA+AS + A++SQ + R V + L P SR
Sbjct: 61 RNNEVRDNAALASAHLGPPTQRGPNGGAVSANASQPRAAAPQRDV---LNLFAPIGSRRA 117
Query: 352 TFRRADQHAPI--QKCCSQTNPSLFVEQHQFYRIQNQRRGHDHDIFAAIGKVSF------ 507
D + +K C + + Q+ + D+ A + +S
Sbjct: 118 QTAAGDPRLMVGYKKTCRK------MLQYYTLSTTSSTEFQVRDVVACMLYLSRQPAYKP 171
Query: 508 VFKLLETTF-DDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNS 684
+F LLE DD C P + Q L+ +R LLEMP+ +D + ++ +F + +
Sbjct: 172 LFHLLEKALEDDLECIPHLEPDQVFNLIGLLRDLLEMPTAALDFNNIKTLKLTFGKILHY 231
Query: 685 PIMKYAKIVLLQNVASQRDQRTTLEEC*SSAAR 783
P+ ++ +I+L+ N R TLEE AR
Sbjct: 232 PLTRFPRIILVPNTDLTRHNSCTLEELILQRAR 264
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +2
Query: 311 NKFVCASQRRRACAPSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLR 490
N F RR A + + M Y+ RK++ +Y+L++TSSTE+++ DVV M++L R
Sbjct: 107 NLFAPIGSRRAQTAAGDPRL-MVGYKKTCRKMLQYYTLSTTSSTEFQVRDVVACMLYLSR 165
Query: 491 SEKY 502
Y
Sbjct: 166 QPAY 169
>UniRef50_A0EYY3 Cluster: P40; n=4; Nucleopolyhedrovirus|Rep: P40 -
Ecotropis obliqua NPV
Length = 385
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 508 VFKLLETTF-DDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNS 684
++ LLE TF D+ C P +T Q + +R+LL +P++TVD V I+RS +
Sbjct: 170 LYILLEQTFTDNNECMPNLTPDQMYNITSMLRNLLNLPNSTVDFENVKILRSGMNKIMQY 229
Query: 685 PIMKYAKIVLLQNVASQRDQRTTLEE 762
PI ++ +++LL N RD+R TLEE
Sbjct: 230 PISRFPRVILLPNTNLSRDKRCTLEE 255
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 28 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQN-VQLNTDVLINFIMHVARKSQ 204
MS+I L+ EI LR KID MQ+ IWP++F LL + + N + L+ D I F+++VA +
Sbjct: 1 MSSIDLFNEIVILRDKIDPQMQMDIWPKLFNLLPEPNDNTINLSFDEFIEFLVNVATIAN 60
Query: 205 NTILNNNAAIASQYAAGTRASSS 273
N ++ N A+ASQ+ A +
Sbjct: 61 NKNVDENVALASQHLLNAGADGN 83
Score = 40.7 bits (91), Expect = 0.040
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 338 RRACAPSEELI--NMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKY 502
R A + S L+ N+ R +K++ +Y+L +TSS+++K+ D+V M++L Y
Sbjct: 111 RNAASSSSALLSDNLPMLRKTCQKILQYYTLTTTSSSDFKVGDLVQCMLYLSTVPSY 167
>UniRef50_Q9DVW7 Cluster: PxORF66 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF66 peptide - Plutella xylostella
granulovirus
Length = 366
Score = 42.7 bits (96), Expect = 0.010
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 37 IALYLEINKLRLKI-DEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQNTI 213
I L+L I L+ + DE M+L + Q FPLL + + + LN +L + + A +QN +
Sbjct: 14 IRLFLAIENLKKALDDEQMRLPYYEQFFPLLGNAN-TINLNVQMLQDLMNDAAVAAQNVM 72
Query: 214 LNNNAAIASQYAAGTRASSSQRQVPPILRRV 306
+ A+ +QY ++ V P RR+
Sbjct: 73 VTRGGAVYAQYVNNAPEPAAPNTVLPPPRRL 103
Score = 36.7 bits (81), Expect = 0.66
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +2
Query: 332 QRRRACAPSEELINMRRYRNAARKLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKY 502
+R A PS + ++ +Y + A K++ ++ +ST Y++ D++M I++ +KY
Sbjct: 101 RRLAAPVPSTVVTDVSKYLSYAEKMMTYFVSAGVTSTTYRVRDIIMLYIYVYSLDKY 157
>UniRef50_Q9PYV0 Cluster: ORF93; n=2; Granulovirus|Rep: ORF93 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 372
Score = 39.9 bits (89), Expect = 0.071
Identities = 53/238 (22%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Frame = +1
Query: 28 MSAIA-LYLEINKLRLKIDEP-MQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARK- 198
MSA +L I +L+ +D+ M+L W + L + L+ +L + I VA+
Sbjct: 1 MSATTRFFLTIERLKNNLDDAQMRLPFWERFLALFGTN--TITLDMPLLTDLINGVAQSL 58
Query: 199 SQNTILNNNAAIASQYAAGTRASSSQRQVPPILRRVP**ICLREPTPSR-LRTFRRADQH 375
+N ++ +A I SQY Q+Q PP L R+P P R + + A+ +
Sbjct: 59 PKNKLVMQSATIYSQYT-NNATDPQQQQQPPALNRLP---------PFRVVNSTPVANNN 108
Query: 376 APIQKCCSQTNPSL--FVE---QHQFYRIQNQRRGHDHDIFAAIGKVSFVFKLLET--TF 534
+K S TN L FV +++++ + + ++I K +F +L+ T
Sbjct: 109 IDFKKYASYTNKVLNYFVSAGVTSSAFKVKDIIMMYLYT--SSIPKFKPLFDVLDAALTR 166
Query: 535 DDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNSPIMKYAKI 708
+ C + + + +LD +R + + + +D ++ + +S + N+ + KY +
Sbjct: 167 GERECVVSLNETTSSLVLDNLRDVTGVTNIRLDYESLVYLNNSIQKAVNNELHKYPMV 224
>UniRef50_UPI00006CC429 Cluster: hypothetical protein
TTHERM_00135980; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00135980 - Tetrahymena
thermophila SB210
Length = 422
Score = 34.3 bits (75), Expect = 3.5
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +1
Query: 46 YLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQNTILNNN 225
YL++N +R KI + A+ +IF + ++LN + L++F ++ R +QN N+
Sbjct: 350 YLQLNFVRKKIVIAIVNAVLIEIFSFVIQFSYQMRLNKEYLLDFFQNIKRSAQNYFFINS 409
>UniRef50_Q73KV2 Cluster: HAMP domain protein; n=1; Treponema
denticola|Rep: HAMP domain protein - Treponema denticola
Length = 1526
Score = 34.3 bits (75), Expect = 3.5
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 576 GHAVGRRAISVGDAFDHSRLDDRRYYAVVVC 668
G+ G R +S GD FD+ +LDD RYYA++ C
Sbjct: 1195 GYYEGARGVS-GDYFDYIKLDD-RYYAIIKC 1223
>UniRef50_A6RB05 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative uncharacterized
protein - Ajellomyces capsulatus NAm1
Length = 1021
Score = 34.3 bits (75), Expect = 3.5
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 40 ALYLEINKLR--LKIDEPMQLAIWPQIFPLLCDEHQNVQLNTDVLINFIMHVARKSQNTI 213
A+ E+NK++ LK ++P+ IW + L+C+E + + D++I+ + + +Q
Sbjct: 791 AVSKELNKMKEFLKREKPIWTKIWEKELQLVCEERDQLTMQEDLVIDLEDDLDKATQTFA 850
Query: 214 LNNNAAIASQYAAGTRASSSQRQVPPILRRVP 309
L A + + A+ + + R P
Sbjct: 851 LVEQATKQQSLHSASNATPGPNGLRNVSRNFP 882
>UniRef50_Q22UP1 Cluster: ATPase, histidine kinase-, DNA gyrase B-,
and HSP90-like domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: ATPase, histidine
kinase-, DNA gyrase B-, and HSP90-like domain containing
protein - Tetrahymena thermophila SB210
Length = 2450
Score = 33.1 bits (72), Expect = 8.1
Identities = 14/55 (25%), Positives = 35/55 (63%)
Frame = +1
Query: 121 LLCDEHQNVQLNTDVLINFIMHVARKSQNTILNNNAAIASQYAAGTRASSSQRQV 285
L+ ++ + +++ + L+ + H++R N+I+N + + ++Y+ R +SSQRQ+
Sbjct: 1346 LVNEKLRELEMYKEELLYTMQHISRTPLNSIINLSDIMLNEYSRQYRITSSQRQI 1400
>UniRef50_O77347 Cluster: Zinc finger protein, putative; n=4;
Plasmodium|Rep: Zinc finger protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 836
Score = 33.1 bits (72), Expect = 8.1
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = -3
Query: 176 KFINTSVFNCTF*CSSQSKGNIWGHIANCIGSSIFNRNLFISKYNAIALIVTDDAHL 6
K+ +T+++N ++ + NI G NC+ + N N +I+KY +++L D+++L
Sbjct: 266 KYAHTNIYNNND-NNNNNNNNINGVNENCLCNYTININQYINKYESVSLREVDESYL 321
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,609,824
Number of Sequences: 1657284
Number of extensions: 14127949
Number of successful extensions: 41872
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 40287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41851
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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