Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120299.Seq
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL133503-1|CAB63507.1|  259|Drosophila melanogaster EG:BACH48C10...    31   1.8  
AE014298-383|AAF45771.1|  259|Drosophila melanogaster CG14050-PA...    31   1.8  
AE014134-1292|AAF52524.2| 1983|Drosophila melanogaster CG6630-PA...    30   4.1  
AE014296-1382|AAF50478.1|  283|Drosophila melanogaster CG13675-P...    29   9.5  

>AL133503-1|CAB63507.1|  259|Drosophila melanogaster EG:BACH48C10.1
           protein.
          Length = 259

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -2

Query: 699 VFHNRTVETTCKRRPHNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSA 547
           V+  RT ++TCKR   ++ GR  +   RHL+++     + V    R +R+A
Sbjct: 14  VYSERTRKSTCKRCHFDMAGRHSENLMRHLKRKHEDAYKSVLDEKREIRAA 64


>AE014298-383|AAF45771.1|  259|Drosophila melanogaster CG14050-PA
           protein.
          Length = 259

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -2

Query: 699 VFHNRTVETTCKRRPHNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSA 547
           V+  RT ++TCKR   ++ GR  +   RHL+++     + V    R +R+A
Sbjct: 14  VYSERTRKSTCKRCHFDMAGRHSENLMRHLKRKHEDAYKSVLDEKREIRAA 64


>AE014134-1292|AAF52524.2| 1983|Drosophila melanogaster CG6630-PA
           protein.
          Length = 1983

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
 Frame = +1

Query: 373 HAPIQKCCSQTNPSLFV---EQHQFYRIQNQRRGHDHDIFAAIGKVSFVFKLLETTFDDY 543
           H    +C   T  +L+    + H  +   N   G+ HD+ +       V ++ E   D  
Sbjct: 181 HGSRAECTRFTRQALYTYRAKNHLIHYKYNAYGGNCHDLPSISPAEELVEEIYEIDADQD 240

Query: 544 TCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFAR--CFNSPIMKYAKIVLL 717
               QMT+ Q DT+      LL+ P +  D    +I   SF R  C+    +    I+ L
Sbjct: 241 RIDEQMTRSQADTITKQ-GYLLKGPDSASDRMFANIGNKSFKRRYCYLRQEIDGTYILEL 299

Query: 718 QNVASQRDQRTTL 756
                Q + + T+
Sbjct: 300 HKDEKQGEAKATI 312


>AE014296-1382|AAF50478.1|  283|Drosophila melanogaster CG13675-PA
           protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 16/73 (21%), Positives = 32/73 (43%)
 Frame = -2

Query: 693 HNRTVETTCKRRPHNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSARVVVKRGFEQF 514
           HN +  +  K +P +++ R  D  +   + R+H   Q  + N  +  S+R   +    +F
Sbjct: 188 HNSSRNSERKSKPSSVNHRDRDSNQTRSRNRTHNTPQSGKKNNSNNNSSRGKQRYNTNKF 247

Query: 513 EHE*YFSDRSKNI 475
           E++    D    I
Sbjct: 248 ENDAELKDYKSKI 260


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,883,173
Number of Sequences: 53049
Number of extensions: 695874
Number of successful extensions: 2426
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2422
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)