Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120298.Seq
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    29   0.12 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    28   0.38 
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    25   2.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.1  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 15/52 (28%), Positives = 31/52 (59%)
 Frame = +2

Query: 521 VDDILNTSDDKIILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAE 676
           +DD+ NT +  I ++ QW+E +++  N  K + I  L+ + + + E +I+ E
Sbjct: 655 IDDLENTIETSINIIRQWMESVELQLNISKTEYI--LVSSHRSRQESQIIVE 704


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 427 GWQQICLNFSISHNTCCICCNRLSVFSLSRAATAFI 320
           G+QQ+  NFS       I  +RL VFS  +  T FI
Sbjct: 335 GFQQVYTNFSFGPRYIKIDPDRLEVFSTVKEITGFI 370


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 19/76 (25%), Positives = 34/76 (44%)
 Frame = +1

Query: 4   ACALTATNRWCITGTPIHNKHWDMYSMINFLQCRPFNDPRVWKMLNKNNDSTNRIKSIIK 183
           AC +T       TG+ + +K++ +YS ++F    P   P  W+ L+ +  S     S  K
Sbjct: 18  ACTVTGAKVRFATGSRVQSKNFKLYSSLSFFP-PPCRVPG-WR-LSTSGASIRMHASARK 74

Query: 184 KIVLKRDKSEISFNIP 231
           +    R +S  +   P
Sbjct: 75  RAYCPRTRSACAETFP 90


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 17/73 (23%), Positives = 29/73 (39%)
 Frame = +2

Query: 515 DLVDDILNTSDDKIILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNNA 694
           D  + +   +D K  LV      + +   + K K++A L YT     + +   E   +  
Sbjct: 745 DSTETVYTLNDIKRYLVHAIENLIVVIVIYDKCKDVAILQYTSDRWRQQKYYDEFPLDGT 804

Query: 695 ADTQHRILLLSIK 733
             T    +LLS K
Sbjct: 805 ITTGSAFVLLSDK 817


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,807
Number of Sequences: 2352
Number of extensions: 16036
Number of successful extensions: 66
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)