Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120296.Seq
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   2.1  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.1  
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    24   4.8  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    24   4.8  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    24   4.8  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   4.8  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    24   4.8  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   4.8  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.4  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 250 RYKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGT--VYDYGVKSPNAAST 399
           +++ SQ+  + +  S+D   +E SN V  +    GT  V +Y    P++ ST
Sbjct: 621 QHQQSQLQHSHQAQSLDQQSQENSNSVANSEQRYGTLPVAEYAAIKPDSLST 672


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 624 TPECSWICAIRAPLVRTAAPCWGRSSTQSCCR 529
           T  C  + A+    +R AAP W  + T   CR
Sbjct: 788 TSRCRLLAAVADSTMRYAAPVWHGALTNRECR 819



 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 509 WHVAIRSRQHDCVLXRPQHGAAVR 580
           WH A+ +R+   +L R Q  AA+R
Sbjct: 809 WHGALTNRECRSLLKRVQRKAAIR 832


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 597 LRKSNCTLVYPK 632
           LRK NCTL +PK
Sbjct: 74  LRKLNCTLYHPK 85


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 597 LRKSNCTLVYPK 632
           LRK NCTL +PK
Sbjct: 74  LRKLNCTLYHPK 85


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 597 LRKSNCTLVYPK 632
           LRK NCTL +PK
Sbjct: 74  LRKLNCTLYHPK 85


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 530  DFESQHAMSSTVLVGVIPL-NTINMDLNS 447
            DF   +  SST+  G IPL N IN +L S
Sbjct: 987  DFLVYYDNSSTLCTGAIPLENVINGNLTS 1015


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 597 LRKSNCTLVYPK 632
           LRK NCTL +PK
Sbjct: 108 LRKLNCTLYHPK 119


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 606 ICAIRAPLVRTAAPCWGRSSTQSCCR 529
           + A+ A ++R  AP W  ++    CR
Sbjct: 789 LAAVAASIIRYGAPVWTEATDLQWCR 814


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +1

Query: 328 VGTNSIFLGTVYD-YGVKSPNAASTSSNVTMTRGTANFDIKEFKS 459
           VG  S  +  V D     SP + S   N +MT+  +  DIKE  S
Sbjct: 635 VGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIKEATS 679


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +1

Query: 328 VGTNSIFLGTVYD-YGVKSPNAASTSSNVTMTRGTANFDIKEFKS 459
           VG  S  +  V D     SP + S   N +MT+  +  DIKE  S
Sbjct: 635 VGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIKEATS 679


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,524
Number of Sequences: 2352
Number of extensions: 14281
Number of successful extensions: 42
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)