Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120295.Seq
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 36 0.029
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 36 0.029
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 36 0.029
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 36 0.029
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 36 0.029
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 36 0.029
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 2.5
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 2.5
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 29 4.4
Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical pr... 28 5.8
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 55 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 207
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 55 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 207
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4176 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4226
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 55 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 207
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 55 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 207
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 55 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 207
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4176 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4226
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 55 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 207
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 500 QSQHNRITLLEDYTREELMNVIGSTMTERQIARMNSLRNGN*KFLYVVK 646
Q + LL YT EEL+ V G + + QIA +R N VVK
Sbjct: 526 QKRRQNFGLLRYYTLEELIEVFGLLLPDVQIAMRRGVRRENMPVSTVVK 574
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 103 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLPTAWRTLRK 282
DL +++ A + ANR + F+NE+ A+R AE ++ +N + L L++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 283 T 285
+
Sbjct: 1362 S 1362
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 103 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLPTAWRTLRK 282
DL +++ A + ANR + F+NE+ A+R AE ++ +N + L L++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 283 T 285
+
Sbjct: 1362 S 1362
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 103 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLPTAWRTLRK 282
DL +++ A + ANR + F+NE+ A+R AE ++ +N + L L++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 283 T 285
+
Sbjct: 1362 S 1362
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 397 RLRPSDRFCGRRNANSLLPTSHTARLWHSCG 305
RL+PS CG RN L P + A ++ S G
Sbjct: 53 RLKPSSEECGLRNTQPLAPITDIAVIFPSLG 83
>Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical
protein R05D11.8 protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 327 AVCDVGNNEFAFLRPQKRSLGRSLKRLGSN-DVIFSSDYVPNSMNVLNKVKEAIPRNKFK 503
+V D N + PQK + GRS K+ +N + +F P+ + + K P +
Sbjct: 111 SVPDSSRNRSVAVSPQKSAKGRSPKKFATNVEKLFEHHSTPSKLTLAKKQSRQSPMHNGF 170
Query: 504 ANT 512
++T
Sbjct: 171 SHT 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,182,775
Number of Sequences: 27780
Number of extensions: 325499
Number of successful extensions: 920
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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