Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120294.Seq
(885 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8T0Z8 Cluster: PM-Scl autoantigen-like protein; n=1; B... 184 2e-45
UniRef50_UPI00015B4B5D Cluster: PREDICTED: similar to conserved ... 121 2e-26
UniRef50_Q12149 Cluster: Exosome complex exonuclease RRP6; n=5; ... 114 2e-24
UniRef50_UPI0000DB792B Cluster: PREDICTED: similar to Rrp6 CG729... 111 2e-23
UniRef50_A7TJX1 Cluster: Putative uncharacterized protein; n=1; ... 109 1e-22
UniRef50_UPI0000D55FBA Cluster: PREDICTED: similar to CG7292-PA;... 107 3e-22
UniRef50_Q7QBT6 Cluster: ENSANGP00000020658; n=2; Culicidae|Rep:... 107 5e-22
UniRef50_A3GG05 Cluster: Ribosomal RNA processing 3'-5' exonucle... 106 9e-22
UniRef50_Q9VFF3 Cluster: CG7292-PA; n=2; Sophophora|Rep: CG7292-... 105 1e-21
UniRef50_Q17951 Cluster: Putative uncharacterized protein crn-3;... 105 2e-21
UniRef50_A5DWN7 Cluster: Putative uncharacterized protein; n=1; ... 105 2e-21
UniRef50_Q75CB2 Cluster: ACL001Cp; n=2; Saccharomycetaceae|Rep: ... 104 3e-21
UniRef50_A5DAB2 Cluster: Putative uncharacterized protein; n=1; ... 104 3e-21
UniRef50_Q10146 Cluster: Uncharacterized protein C1F3.01; n=1; S... 104 3e-21
UniRef50_A6R753 Cluster: Predicted protein; n=1; Ajellomyces cap... 103 6e-21
UniRef50_UPI0000E469F8 Cluster: PREDICTED: similar to exosome co... 103 8e-21
UniRef50_Q4P181 Cluster: Putative uncharacterized protein; n=1; ... 103 8e-21
UniRef50_Q6C721 Cluster: Similar to sp|Q12149 Saccharomyces cere... 102 1e-20
UniRef50_Q23S17 Cluster: 3'-5' exonuclease family protein; n=1; ... 101 3e-20
UniRef50_A2R7H4 Cluster: Contig An16c0130, complete genome; n=15... 99 7e-20
UniRef50_Q5KK81 Cluster: PM-scl autoantigen, putative; n=2; Filo... 99 2e-19
UniRef50_Q01780 Cluster: Exosome component 10; n=44; Eumetazoa|R... 98 3e-19
UniRef50_A0EBI7 Cluster: Chromosome undetermined scaffold_88, wh... 97 5e-19
UniRef50_Q9FFL2 Cluster: Nucleolar protein-like; n=5; Arabidopsi... 96 9e-19
UniRef50_Q7XE52 Cluster: Nucleolar protein, putative, expressed;... 96 9e-19
UniRef50_Q0U8F5 Cluster: Putative uncharacterized protein; n=1; ... 94 5e-18
UniRef50_A4S626 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 93 6e-18
UniRef50_UPI0000D56CFF Cluster: PREDICTED: similar to CG7292-PA;... 93 9e-18
UniRef50_A4RDR3 Cluster: Putative uncharacterized protein; n=1; ... 93 9e-18
UniRef50_Q4PL82 Cluster: Putative uncharacterized protein; n=3; ... 91 3e-17
UniRef50_Q00XJ4 Cluster: Exosome 3'-5' exoribonuclease complex, ... 91 3e-17
UniRef50_A7PX27 Cluster: Chromosome chr12 scaffold_36, whole gen... 90 8e-17
UniRef50_A6SCE7 Cluster: Putative uncharacterized protein; n=2; ... 90 8e-17
UniRef50_UPI000023ED22 Cluster: hypothetical protein FG06049.1; ... 88 2e-16
UniRef50_A7AVN6 Cluster: Exosome component 10, putative; n=1; Ba... 88 2e-16
UniRef50_Q2GQW9 Cluster: Putative uncharacterized protein; n=2; ... 87 6e-16
UniRef50_Q4UC54 Cluster: 3'-5' exonuclease, putative; n=2; Theil... 85 2e-15
UniRef50_Q4DSE3 Cluster: Ribosomal RNA processing protein 6, put... 85 2e-15
UniRef50_Q4Q2N6 Cluster: Exosome subunit rrp6p homologue, putati... 84 5e-15
UniRef50_UPI00004994B5 Cluster: PM-Scl autoantigen-related prote... 81 3e-14
UniRef50_Q5CS61 Cluster: RRPp/PMC2 like exosome 3'-5' exoribonuc... 79 1e-13
UniRef50_Q8LMQ9 Cluster: Putative nucleolar protein; n=2; Oryza ... 79 2e-13
UniRef50_A1I9P1 Cluster: Ribonuclease D, putative; n=1; Candidat... 67 6e-10
UniRef50_UPI00006CF2A3 Cluster: 3''''-5'''' exonuclease family p... 66 1e-09
UniRef50_A0LFB2 Cluster: 3'-5' exonuclease; n=1; Syntrophobacter... 62 1e-08
UniRef50_Q69RB5 Cluster: Polymyositis/scleroderma autoantigen 2-... 62 2e-08
UniRef50_UPI0000D56498 Cluster: PREDICTED: similar to CG7292-PA;... 61 3e-08
UniRef50_A5K3R1 Cluster: 3'-5' exonuclease domain containing pro... 60 1e-07
UniRef50_Q241P8 Cluster: 3'-5' exonuclease family protein; n=2; ... 59 1e-07
UniRef50_A7HCG7 Cluster: 3'-5' exonuclease precursor; n=2; Anaer... 57 5e-07
UniRef50_Q23PU6 Cluster: 3'-5' exonuclease family protein; n=1; ... 57 5e-07
UniRef50_Q3A7R1 Cluster: RNase D; n=2; Desulfuromonadales|Rep: R... 56 9e-07
UniRef50_Q8EYX1 Cluster: Ribonuclease D; n=4; Leptospira|Rep: Ri... 54 4e-06
UniRef50_A0CQJ2 Cluster: Chromosome undetermined scaffold_24, wh... 54 4e-06
UniRef50_Q74G09 Cluster: Ribonuclease D, putative; n=6; Desulfur... 52 2e-05
UniRef50_Q22AH5 Cluster: 3'-5' exonuclease family protein; n=1; ... 52 3e-05
UniRef50_Q8IKX8 Cluster: 3'-5' exonuclease, putative; n=1; Plasm... 50 6e-05
UniRef50_A0W889 Cluster: 3'-5' exonuclease; n=1; Geobacter lovle... 50 8e-05
UniRef50_Q2LWK2 Cluster: Ribonuclease D; n=1; Syntrophus aciditr... 50 1e-04
UniRef50_Q09BY7 Cluster: 3'-5' exonuclease, putative; n=2; Cysto... 50 1e-04
UniRef50_Q4XW48 Cluster: 3'-5' exonuclease, putative; n=2; Plasm... 49 1e-04
UniRef50_Q8DFS1 Cluster: Ribonuclease D; n=34; Vibrionales|Rep: ... 46 0.001
UniRef50_Q7VLG8 Cluster: Ribonuclease D; n=2; Pasteurellaceae|Re... 46 0.001
UniRef50_A7JL92 Cluster: Ribonuclease D; n=11; Francisella tular... 46 0.001
UniRef50_A6G563 Cluster: Ribonuclease D, putative; n=1; Plesiocy... 46 0.001
UniRef50_Q7NEY0 Cluster: Glr3747 protein; n=1; Gloeobacter viola... 44 0.004
UniRef50_Q4ULB3 Cluster: Ribonuclease D; n=9; Rickettsia|Rep: Ri... 44 0.005
UniRef50_A4E7K3 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_Q31F99 Cluster: Ribonuclease D; n=1; Thiomicrospira cru... 42 0.028
UniRef50_A6DHN3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.028
UniRef50_UPI0000E49420 Cluster: PREDICTED: similar to G protein-... 41 0.048
UniRef50_Q97HU8 Cluster: Ribonuclease D; n=1; Clostridium acetob... 41 0.048
UniRef50_Q6G329 Cluster: Ribonuclease D; n=3; Bartonella|Rep: Ri... 40 0.064
UniRef50_A1B5A2 Cluster: 3'-5' exonuclease; n=3; Rhodobacteracea... 40 0.084
UniRef50_P44442 Cluster: Ribonuclease D; n=18; Pasteurellaceae|R... 40 0.084
UniRef50_A0Z9G7 Cluster: Ribonuclease D; n=1; marine gamma prote... 40 0.11
UniRef50_UPI0000E46DB2 Cluster: PREDICTED: similar to RE33408p; ... 39 0.15
UniRef50_Q6FA19 Cluster: Ribonuclease D, processes tRNA; n=2; Ac... 39 0.15
UniRef50_Q5FT94 Cluster: Ribonuclease D; n=3; Acetobacteraceae|R... 39 0.15
UniRef50_Q2BKH7 Cluster: Ribonuclease D; n=1; Neptuniibacter cae... 39 0.15
UniRef50_UPI0000587482 Cluster: PREDICTED: hypothetical protein;... 39 0.19
UniRef50_A6C450 Cluster: Ribonuclease D; n=1; Planctomyces maris... 39 0.19
UniRef50_A5WG76 Cluster: 3'-5' exonuclease; n=3; Psychrobacter|R... 39 0.19
UniRef50_Q9C7K6 Cluster: 3'-5' exonuclease, putative; n=2; core ... 39 0.19
UniRef50_UPI0001555E55 Cluster: PREDICTED: hypothetical protein;... 38 0.26
UniRef50_Q0D6Q9 Cluster: Os07g0452400 protein; n=5; Oryza sativa... 38 0.26
UniRef50_Q8F260 Cluster: Ribonuclease D; n=4; Leptospira|Rep: Ri... 38 0.34
UniRef50_Q6SGG6 Cluster: Ribonuclease D, putative; n=3; environm... 38 0.34
UniRef50_Q11JA8 Cluster: Ribonuclease D; n=40; Alphaproteobacter... 38 0.34
UniRef50_A0YC02 Cluster: Ribonuclease D; n=1; marine gamma prote... 38 0.34
UniRef50_A2DER9 Cluster: 3'-5' exonuclease family protein; n=1; ... 38 0.34
UniRef50_A4ALP3 Cluster: Ribonuclease; n=3; Actinobacteria (clas... 38 0.45
UniRef50_A4BJR0 Cluster: Ribonuclease D; n=1; Reinekea sp. MED29... 37 0.59
UniRef50_UPI0000E0E878 Cluster: ribonuclease D; n=1; alpha prote... 36 1.0
UniRef50_UPI0000510196 Cluster: COG0349: Ribonuclease D; n=1; Br... 36 1.0
UniRef50_Q28RA7 Cluster: Ribonuclease D; n=19; Alphaproteobacter... 36 1.0
UniRef50_Q1QXJ4 Cluster: Ribonuclease D; n=1; Chromohalobacter s... 36 1.0
UniRef50_A4GIY0 Cluster: Putative ribonuclease D; n=1; unculture... 36 1.0
UniRef50_A0ZIG3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q241P7 Cluster: 3'-5' exonuclease family protein; n=1; ... 36 1.0
UniRef50_Q9I450 Cluster: Ribonuclease D; n=21; Pseudomonadaceae|... 36 1.4
UniRef50_Q6N5D4 Cluster: Ribonuclease D; n=11; Rhizobiales|Rep: ... 36 1.4
UniRef50_Q5PBN9 Cluster: Ribonuclease D; n=2; Anaplasma|Rep: Rib... 36 1.4
UniRef50_Q179T2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A7APW4 Cluster: 3'-5' exonuclease domain containing pro... 36 1.4
UniRef50_A2EMW6 Cluster: HRDC domain containing protein; n=1; Tr... 36 1.4
UniRef50_A0DUC4 Cluster: Chromosome undetermined scaffold_64, wh... 36 1.4
UniRef50_Q0BZZ0 Cluster: Ribonuclease D; n=1; Hyphomonas neptuni... 36 1.8
UniRef50_A6VYC1 Cluster: Ribonuclease D; n=2; Marinomonas|Rep: R... 36 1.8
UniRef50_A4A872 Cluster: Ribonuclease D; n=1; Congregibacter lit... 36 1.8
UniRef50_Q6NGV4 Cluster: Putative ribonuclease; n=1; Corynebacte... 35 2.4
UniRef50_Q5QWP5 Cluster: Ribonuclease D; n=2; Idiomarina|Rep: Ri... 35 2.4
UniRef50_Q1GSA7 Cluster: Ribonuclease D; n=8; Sphingomonadales|R... 35 2.4
UniRef50_A1WCM5 Cluster: Putative uncharacterized protein precur... 35 2.4
UniRef50_Q8G5Q6 Cluster: Putative uncharacterized protein; n=4; ... 35 3.2
UniRef50_P09155 Cluster: Ribonuclease D; n=44; Enterobacteriacea... 35 3.2
UniRef50_Q55641 Cluster: Ribonuclease D; n=29; Cyanobacteria|Rep... 34 4.2
UniRef50_Q4FNB9 Cluster: Ribonuclease D; n=2; Candidatus Pelagib... 34 4.2
UniRef50_Q1N1A2 Cluster: Ribonuclease D; n=1; Oceanobacter sp. R... 34 4.2
UniRef50_A5EXN2 Cluster: Ribonuclease D; n=2; Dichelobacter nodo... 34 4.2
UniRef50_Q8N9H8 Cluster: CDNA FLJ37119 fis, clone BRACE2022333; ... 34 4.2
UniRef50_A6RX88 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_P34607 Cluster: Probable exonuclease mut-7; n=2; Caenor... 34 4.2
UniRef50_O67779 Cluster: DNA polymerase I; n=6; Aquificales|Rep:... 34 4.2
UniRef50_Q5FG63 Cluster: Ribonuclease D; n=5; canis group|Rep: R... 34 5.5
UniRef50_P41001 Cluster: DNA topoisomerase 2; n=11; Plasmodium|R... 34 5.5
UniRef50_Q5GT27 Cluster: Ribonuclease D; n=5; Wolbachia|Rep: Rib... 33 7.3
UniRef50_Q3ICG4 Cluster: Putative RNase D, processing tRNAs; n=3... 33 7.3
UniRef50_Q0F2Y2 Cluster: Ribonuclease D; n=1; Mariprofundus ferr... 33 7.3
UniRef50_A7BCR3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q7YU43 Cluster: RE33408p; n=4; Diptera|Rep: RE33408p - ... 33 7.3
UniRef50_Q17I49 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q2H2D9 Cluster: Putative uncharacterized protein; n=2; ... 33 7.3
UniRef50_Q1E2I8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q6A8V2 Cluster: Ribonuclease D; n=1; Propionibacterium ... 33 9.7
UniRef50_Q2YC78 Cluster: Response regulator receiver (CheY-like)... 33 9.7
UniRef50_Q1LCF8 Cluster: Sensor protein; n=1; Ralstonia metallid... 33 9.7
UniRef50_A6FH72 Cluster: RNase D, processes tRNA; n=1; Moritella... 33 9.7
UniRef50_Q9FIN8 Cluster: Genomic DNA, chromosome 5, TAC clone:K1... 33 9.7
UniRef50_Q4QIB7 Cluster: Putative uncharacterized protein; n=3; ... 33 9.7
UniRef50_A7AQX3 Cluster: DNA polymerase I, putative; n=1; Babesi... 33 9.7
UniRef50_A5K9X6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A5K2N0 Cluster: 3'-5' exonuclease domain containing pro... 33 9.7
UniRef50_Q8NHD1 Cluster: HBE269; n=4; Eutheria|Rep: HBE269 - Hom... 33 9.7
>UniRef50_Q8T0Z8 Cluster: PM-Scl autoantigen-like protein; n=1;
Bombyx mori|Rep: PM-Scl autoantigen-like protein -
Bombyx mori (Silk moth)
Length = 451
Score = 184 bits (449), Expect = 2e-45
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML
Sbjct: 245 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 304
Query: 436 LSVFEDSRQTCASTYNKEVIHDES 507
LSVFEDSRQTCASTYNKEVIHDES
Sbjct: 305 LSVFEDSRQTCASTYNKEVIHDES 328
Score = 181 bits (441), Expect = 2e-44
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 510 IPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGV 689
IPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGV
Sbjct: 330 IPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGV 389
Query: 690 NACCDPMPPFVKQNVITIHRMILS 761
NACCDPMPPFVKQNVITIHRMILS
Sbjct: 390 NACCDPMPPFVKQNVITIHRMILS 413
Score = 179 bits (436), Expect = 8e-44
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY
Sbjct: 161 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 220
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
LVGLFDTYHAAKSLGLPALSLKFL
Sbjct: 221 LVGLFDTYHAAKSLGLPALSLKFL 244
>UniRef50_UPI00015B4B5D Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 1138
Score = 121 bits (292), Expect = 2e-26
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
QGITCL+QIST + D++ID L +R +H LN +FT P LKVFHGADSD+LWLQRD G+
Sbjct: 667 QGITCLMQISTKDT-DYLIDTLTLRSELHVLNEIFTKPSILKVFHGADSDILWLQRDLGL 725
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+V +FDTY AAK LGLP LSL +L
Sbjct: 726 YIVNMFDTYQAAKQLGLPFLSLSYL 750
Score = 115 bits (276), Expect = 2e-24
Identities = 47/81 (58%), Positives = 68/81 (83%)
Frame = +3
Query: 516 LYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNA 695
+Y +S+K F+N+Q+ AL+ L+KWRD AR D+ST Y+LPNHMLL+++E LPRE+QG+ A
Sbjct: 838 MYRKSQKMFNNRQLFALQELHKWRDETARAEDDSTNYVLPNHMLLNIAETLPREMQGILA 897
Query: 696 CCDPMPPFVKQNVITIHRMIL 758
CC+P+PP V+QN++ IH+MIL
Sbjct: 898 CCNPIPPLVRQNLLKIHKMIL 918
Score = 89.8 bits (213), Expect = 8e-17
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L +C + +K ++LADWRIRPLP+ L+KYAR DTHYLLY+ ++ N +I+ GQ+N+L
Sbjct: 751 LKTHCEISANKHFQLADWRIRPLPEELMKYAREDTHYLLYIKDILSNALIDSANGQSNIL 810
Query: 436 LSVFEDSRQTCASTYNKEVIHDES 507
+V+ S C TY K V + S
Sbjct: 811 KAVYTRSTDICKQTYTKPVWTENS 834
>UniRef50_Q12149 Cluster: Exosome complex exonuclease RRP6; n=5;
Saccharomycetales|Rep: Exosome complex exonuclease RRP6
- Saccharomyces cerevisiae (Baker's yeast)
Length = 733
Score = 114 bits (275), Expect = 2e-24
Identities = 51/84 (60%), Positives = 68/84 (80%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GI CL+QIST E D+++D L +RE++H LN VFT+P +KVFHGA D++WLQRD G+Y
Sbjct: 249 GIVCLMQISTRER-DYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLY 307
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+VGLFDTYHA+K++GLP SL +L
Sbjct: 308 VVGLFDTYHASKAIGLPRHSLAYL 331
Score = 60.9 bits (141), Expect = 4e-08
Identities = 36/109 (33%), Positives = 52/109 (47%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L + T K Y+LADWRIRPL + YAR DTH+LL ++ ++N++IE +N L
Sbjct: 332 LENFANFKTSKKYQLADWRIRPLSKPMTAYARADTHFLLNIYDQLRNKLIE-----SNKL 386
Query: 436 LSVFEDSRQTCASTYNKEVIHDESPYHYTYVRRRISIISKWRLLRCSTN 582
V +SR + +P Y I S W++L N
Sbjct: 387 AGVLYESRNVAKRRFEYSKYRPLTPSSEVY--SPIEKESPWKILMYQYN 433
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +3
Query: 537 NFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPP 716
N ++ ++ LY+WRD AR+ DES +++PN +L +L P ++ GV + + +
Sbjct: 433 NIPPEREVLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTE 492
Query: 717 FVKQNVITIHRMI 755
V+QN + +I
Sbjct: 493 HVRQNAKLLANLI 505
>UniRef50_UPI0000DB792B Cluster: PREDICTED: similar to Rrp6
CG7292-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Rrp6 CG7292-PA - Apis mellifera
Length = 722
Score = 111 bits (267), Expect = 2e-23
Identities = 50/85 (58%), Positives = 66/85 (77%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
QGITCL+QIST++ D++ID L++R +H+LN +FT P LKVFHGAD D+ WLQRD +
Sbjct: 294 QGITCLMQISTEDK-DYLIDTLSLRSELHELNEIFTKPTILKVFHGADLDIQWLQRDLSL 352
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+V +FDT+ AAK L LP LSL +L
Sbjct: 353 YVVNMFDTHQAAKQLNLPYLSLAYL 377
Score = 108 bits (260), Expect = 2e-22
Identities = 44/81 (54%), Positives = 66/81 (81%)
Frame = +3
Query: 516 LYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNA 695
+Y +S+K F+N+Q+ AL+ L+KWRD AR D+S Y+LPNHMLL+++E LPRE+QG+ A
Sbjct: 465 MYRKSQKMFNNKQLYALRELHKWRDDTARIEDDSIAYVLPNHMLLNIAETLPREMQGILA 524
Query: 696 CCDPMPPFVKQNVITIHRMIL 758
CCD +PP V+QN++ +H++IL
Sbjct: 525 CCDSIPPLVRQNLLKLHKIIL 545
Score = 97.1 bits (231), Expect = 5e-19
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L YC VD DK +++ADWRIRPLP+ LIKYAR DTHYLLY+ ++KN +I+ GQ N+L
Sbjct: 378 LKHYCNVDPDKHFQMADWRIRPLPEKLIKYAREDTHYLLYIKDMLKNALIDVANGQINIL 437
Query: 436 LSVFEDSRQTCASTYNKEVIHDES 507
V++ S + C TY K + +E+
Sbjct: 438 KVVYDRSTEICKKTYVKPIWTEEN 461
>UniRef50_A7TJX1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 746
Score = 109 bits (261), Expect = 1e-22
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GI CL+QIST + DF++D LA+R+ +H LN VF DP LKV HGA D++WLQRD G+Y
Sbjct: 248 GIVCLMQISTRKE-DFLVDTLALRDELHILNEVFADPNILKVLHGAFMDIIWLQRDLGLY 306
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDTYHA+++LG P SL +L
Sbjct: 307 VVSLFDTYHASRALGFPRHSLAYL 330
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKN 414
L KY T K Y+LADWR+RPL + YAR DTH+LL ++ ++NQ+I +N
Sbjct: 331 LEKYANFKTSKKYQLADWRVRPLSKPMHAYARADTHFLLNIYDQIRNQLIREN 383
Score = 50.8 bits (116), Expect = 5e-05
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +3
Query: 537 NFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPP 716
N + ++ LK +++WRD AR+ DES Y++PN +++SL E P + GV + + M
Sbjct: 432 NVPSTKIELLKRIWEWRDMIARRDDESPRYIMPNQLMISLVEYTPIDPAGVISVSNVMTD 491
Query: 717 FVKQNVITIHRMI 755
V+ N I +I
Sbjct: 492 HVRSNSKVIANLI 504
>UniRef50_UPI0000D55FBA Cluster: PREDICTED: similar to CG7292-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG7292-PA - Tribolium castaneum
Length = 927
Score = 107 bits (258), Expect = 3e-22
Identities = 53/96 (55%), Positives = 70/96 (72%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GITCLIQIST++ D++IDALA+R+ + LN VFT +K+FHGAD D+ WLQRD +Y
Sbjct: 292 GITCLIQISTEDK-DYLIDALALRDKLSILNEVFTKNTIVKIFHGADKDIEWLQRDLSLY 350
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL**SIAALTPIKR 292
+V +FDT+ AAK+L PALSL FL +TP K+
Sbjct: 351 VVNMFDTHQAAKALQYPALSLAFLMKKFCNVTPNKQ 386
Score = 93.1 bits (221), Expect = 9e-18
Identities = 38/84 (45%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
+ K+C V +K ++LADWRIRPLPD L YAR DTHYL+Y++++MK +++ K +L
Sbjct: 375 MKKFCNVTPNKQFQLADWRIRPLPDELKSYAREDTHYLIYIYKMMKRELLHKTNKCDKLL 434
Query: 436 LSVFEDSRQTCASTYNKEVIHDES 507
SV E S + C Y K ++H++S
Sbjct: 435 RSVIERSTEVCKKRYFKPILHEDS 458
Score = 77.0 bits (181), Expect = 6e-13
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Frame = +3
Query: 510 IPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGV 689
+ LY + KK FDN+QM ALK Y+LPNHMLL +SE LPRE+QG+
Sbjct: 460 LELYRKCKKMFDNRQMYALK-----------------DYVLPNHMLLQISELLPREMQGI 502
Query: 690 NACCDPMPPFVKQNVITIHRMILSFAN--CRRTLRYST*PSGI-RNMMNAGIEQIHYEMH 860
ACC+P+PP V+ +++ +H++IL + + T G+ + M ++ + + H
Sbjct: 503 LACCNPIPPLVRSHLLELHQIILKAREQPLEKAILKETSGRGVLKEMSKVNMDSVLHCPH 562
Query: 861 DLDHEAEY 884
DL E+
Sbjct: 563 DLTKTNEF 570
>UniRef50_Q7QBT6 Cluster: ENSANGP00000020658; n=2; Culicidae|Rep:
ENSANGP00000020658 - Anopheles gambiae str. PEST
Length = 548
Score = 107 bits (256), Expect = 5e-22
Identities = 50/85 (58%), Positives = 64/85 (75%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
QG TCL+Q+ST D+I+DALA+R+ +H LN VFTDPKKLKV HG+ SD+ WLQRD G+
Sbjct: 258 QGFTCLMQLST-RTKDYIVDALALRDELHVLNEVFTDPKKLKVLHGSVSDIEWLQRDLGL 316
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
YLV +FDT AA+ L + L+FL
Sbjct: 317 YLVNMFDTGEAARVLQFSRIGLQFL 341
Score = 93.1 bits (221), Expect = 9e-18
Identities = 40/98 (40%), Positives = 66/98 (67%)
Frame = +1
Query: 214 SQVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMK 393
++V + +R Q L YC +DTDK ++LADWRIRP+P+ I+YAR DTHYLLY++ M+
Sbjct: 328 ARVLQFSRIGLQFLLKHYCNIDTDKAFQLADWRIRPIPENFIEYARKDTHYLLYIYDRMR 387
Query: 394 NQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDES 507
N+++EK ++L +V++ S C Y K +++++
Sbjct: 388 NELLEKG---ESLLQTVYDKSTFMCKQRYQKPTMNEDT 422
Score = 87.8 bits (208), Expect = 3e-16
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +3
Query: 516 LYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNA 695
+Y RS+ FD++QM A + + WRD AR DES Y+LP HM L ++ LPRE+QG+ A
Sbjct: 426 IYRRSRYVFDHRQMYAFREVLYWRDQIARLEDESPGYVLPQHMALDIASKLPREMQGIIA 485
Query: 696 CCDPMPPFVKQNVITIHRMIL 758
CC P+P V+Q++ +H+++L
Sbjct: 486 CCTPVPSLVRQHLHALHKIVL 506
>UniRef50_A3GG05 Cluster: Ribosomal RNA processing 3'-5'
exonuclease; n=5; Saccharomycetales|Rep: Ribosomal RNA
processing 3'-5' exonuclease - Pichia stipitis (Yeast)
Length = 792
Score = 106 bits (254), Expect = 9e-22
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GI CL+QIS + D+IID LA+R+ + LN VFT+P +KVFHGA D++WLQRD G+Y
Sbjct: 269 GIVCLMQISNRDQ-DWIIDTLALRDDLECLNTVFTNPHIVKVFHGAFMDIIWLQRDLGLY 327
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDTYHA+K LG P SL +L
Sbjct: 328 IVSLFDTYHASKLLGFPKFSLAYL 351
Score = 58.8 bits (136), Expect = 2e-07
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +1
Query: 280 TDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSR 459
T K Y+LADWRIRPL ++ YAR DTH+LL ++ +KN++I+ AG + +F DSR
Sbjct: 360 TSKKYQLADWRIRPLLPPMMAYARSDTHFLLSIFDQLKNKLID--AGNEKLQRVLF-DSR 416
Query: 460 Q 462
Q
Sbjct: 417 Q 417
Score = 38.7 bits (86), Expect = 0.19
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 501 REPIPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSE-NLPRE 677
REP I + N + + + ++ LY WRD A+ DES +++PN +L++L+ N P +
Sbjct: 449 REPFSS-IMVQYNVPSHKKSVVEALYNWRDRIAKIEDESVRFVMPNQLLVNLANLNQPVD 507
Query: 678 LQGV 689
+ V
Sbjct: 508 VAKV 511
>UniRef50_Q9VFF3 Cluster: CG7292-PA; n=2; Sophophora|Rep: CG7292-PA
- Drosophila melanogaster (Fruit fly)
Length = 885
Score = 105 bits (253), Expect = 1e-21
Identities = 47/84 (55%), Positives = 63/84 (75%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GITCL+Q+ST D+I D L +R+ +H LN+V TDPKKLK+ HGAD D+ WLQRD +Y
Sbjct: 307 GITCLVQMST-RSKDYIFDTLILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLY 365
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V +FDT+ AAK+L + LSL +L
Sbjct: 366 IVNMFDTHRAAKALNMARLSLAYL 389
Score = 105 bits (253), Expect = 1e-21
Identities = 41/83 (49%), Positives = 68/83 (81%)
Frame = +3
Query: 510 IPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGV 689
+ L ++K++FDN+Q+ AL+ +++WRD+ AR DES Y+LPNHM+L ++E+LPRE+QG+
Sbjct: 474 LDLVRKTKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLPREMQGI 533
Query: 690 NACCDPMPPFVKQNVITIHRMIL 758
ACC+P+PP V+Q + T+H+++L
Sbjct: 534 LACCNPIPPLVRQQLHTLHQIVL 556
Score = 85.0 bits (201), Expect = 2e-15
Identities = 43/101 (42%), Positives = 61/101 (60%)
Frame = +1
Query: 232 ARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
AR L Y +D DK+ +LADWR+RPLP L+ YAR DTH+L+YV+ M N ++++
Sbjct: 382 ARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYGRMTNDLLQQ 441
Query: 412 NAGQTNMLLSVFEDSRQTCASTYNKEVIHDESPYHYTYVRR 534
+A + +L SV++ S C YNK I ES H VR+
Sbjct: 442 HA-EPGLLGSVYQQSTDVCKKRYNKPHIGPES--HLDLVRK 479
>UniRef50_Q17951 Cluster: Putative uncharacterized protein crn-3;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein crn-3 - Caenorhabditis elegans
Length = 876
Score = 105 bits (251), Expect = 2e-21
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G+TCLIQIST + DFIID + +H+ LN F +P+ LKVFHG+DSDVLWLQRD+GV+
Sbjct: 314 GLTCLIQISTRDE-DFIIDPFPIWDHVGMLNEPFANPRILKVFHGSDSDVLWLQRDYGVH 372
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDTY A K L P SL +L
Sbjct: 373 VVNLFDTYVAMKKLKYPKFSLAYL 396
Score = 83.8 bits (198), Expect = 5e-15
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3
Query: 522 IRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACC 701
I+ + + +Q AL L+KWRD AR DES ++LPNHM+LSLSE LPR++ G+ ACC
Sbjct: 482 IKFRFTLNTRQDYALTHLFKWRDVVARAEDESPHFVLPNHMMLSLSETLPRDVGGIYACC 541
Query: 702 DPMPPFVKQNVITIHRMIL 758
+P+P FVKQ I ++I+
Sbjct: 542 NPLPYFVKQRTGDILKIIV 560
Score = 72.9 bits (171), Expect = 1e-11
Identities = 34/96 (35%), Positives = 59/96 (61%)
Frame = +1
Query: 259 MKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLL 438
+++ V DK Y+LADWR RPL + +I YAR DTHYLLY + +++ Q+++++ T L
Sbjct: 398 LRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLKQD---TKDLA 454
Query: 439 SVFEDSRQTCASTYNKEVIHDESPYHYTYVRRRISI 546
+V+ +S C Y K V + + + T ++ R ++
Sbjct: 455 NVYSESSDLCIKVYKKPVFNPKG--YLTEIKFRFTL 488
>UniRef50_A5DWN7 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 826
Score = 105 bits (251), Expect = 2e-21
Identities = 46/84 (54%), Positives = 65/84 (77%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G+ CL+QIS E D++ID LA+R+ + KLNV+FT+ + +KVFHGA D++WLQRD G+Y
Sbjct: 267 GLVCLMQISNREK-DWVIDTLALRDELSKLNVIFTNHEIVKVFHGAFMDIIWLQRDLGLY 325
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDTYHA++ LG SL++L
Sbjct: 326 IVSLFDTYHASRQLGFAKFSLQYL 349
Score = 63.7 bits (148), Expect = 6e-09
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +1
Query: 232 ARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
A+ Q L + T K Y+LADWRIRPLP ++ YAR DTH+LLY++ ++N++I++
Sbjct: 342 AKFSLQYLLDTFAHFRTSKKYQLADWRIRPLPAPMLAYARSDTHFLLYIYDQLRNKLIDQ 401
Query: 412 N 414
+
Sbjct: 402 D 402
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 564 LKMLYKWRDSQARQLDESTTYLLPNHMLLSLSE-NLPRELQGVNAC 698
+++LYK+RD+ AR+ DES Y++PN +L+SLS P E + V C
Sbjct: 466 VEVLYKYRDAVAREEDESVRYIMPNQLLVSLSMLEAPVETEKVLNC 511
>UniRef50_Q75CB2 Cluster: ACL001Cp; n=2; Saccharomycetaceae|Rep:
ACL001Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 745
Score = 104 bits (250), Expect = 3e-21
Identities = 45/84 (53%), Positives = 64/84 (76%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GI CL+QIS+ D+++D +A+R+ +H LNV+ DP +KVFHGA D++WLQRD G+Y
Sbjct: 249 GIVCLMQISS-RSKDWLVDTIALRDDLHVLNVILPDPTVVKVFHGAFMDMIWLQRDLGLY 307
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDTYHA+++LG P SL +L
Sbjct: 308 VVSLFDTYHASRALGFPKHSLAYL 331
Score = 55.6 bits (128), Expect = 2e-06
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +1
Query: 280 TDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIE 408
T K Y+LADWR+RPLP L YAR DTH+LL ++ ++N +++
Sbjct: 340 TSKKYQLADWRVRPLPKPLRDYARSDTHFLLSIYDDLRNALVK 382
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +3
Query: 564 LKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNVITI 743
LK LY+WRD+ AR+ DES Y++PN +L+SL P E GV + + +V+ N T+
Sbjct: 442 LKKLYEWRDTVARRDDESVRYVMPNQLLVSLVSLSPSETAGVLSVSTYVTDYVRSNARTL 501
Query: 744 HRMI 755
+I
Sbjct: 502 ANLI 505
>UniRef50_A5DAB2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 755
Score = 104 bits (249), Expect = 3e-21
Identities = 48/84 (57%), Positives = 63/84 (75%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GI CL+QIS+ E D+IID L +R+ + LN +F +P +KVFHGA D++WLQRD G+Y
Sbjct: 261 GIVCLMQISSREK-DWIIDTLKLRDSLVVLNEIFANPNIVKVFHGAFMDIIWLQRDLGLY 319
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDTYHA+K LGLP SL +L
Sbjct: 320 VVSLFDTYHASKKLGLPRFSLAYL 343
Score = 63.7 bits (148), Expect = 6e-09
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L Y T K Y+LADWR+RPL ++ YAR DTH+LLYV+ ++NQ++ ++G M
Sbjct: 344 LENYANFKTSKKYQLADWRMRPLLGPMLSYARSDTHFLLYVYDQLRNQLL--SSGSQKM- 400
Query: 436 LSVFEDSRQ 462
V +SRQ
Sbjct: 401 KEVLHESRQ 409
Score = 41.5 bits (93), Expect = 0.028
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +3
Query: 522 IRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLS 659
I ++ N N ++ LY WRD++A++ DE Y++PN +L++ S
Sbjct: 446 IMNQFNLPNHTRPIVEALYLWRDAKAKECDELVRYVMPNQLLVNFS 491
>UniRef50_Q10146 Cluster: Uncharacterized protein C1F3.01; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C1F3.01 - Schizosaccharomyces pombe (Fission yeast)
Length = 777
Score = 104 bits (249), Expect = 3e-21
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
+G CL+QIS E D+I+D L +RE + LNVVFT+P +KVFHGA D++WLQRDFG+
Sbjct: 253 RGFVCLMQISNREK-DWIVDTLELREELEALNVVFTNPNIIKVFHGATMDIIWLQRDFGL 311
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+V LFDTY+A K LG L FL
Sbjct: 312 YVVNLFDTYYATKVLGFEGHGLAFL 336
Score = 93.1 bits (221), Expect = 9e-18
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNA-GQTNM 432
L KYC D DK Y++ADWRIRPLP ++KYA+ DTHYLLY+W ++N++I K+A + N+
Sbjct: 337 LQKYCDYDADKRYQMADWRIRPLPREMLKYAQSDTHYLLYIWDHLRNELISKSAERKENL 396
Query: 433 LLSVFEDSRQTCASTYNKE 489
+ SVF S+Q Y E
Sbjct: 397 MQSVFNSSKQISLRKYELE 415
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +3
Query: 528 SKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDP 707
S K + + + L+ WRDS AR+ DES Y+LPN +L++++ + P E V +
Sbjct: 437 SSKIIGREALMIYRALHDWRDSVARKEDESVRYVLPNRLLIAIAASKPVEAADVFSISKQ 496
Query: 708 MPPFVKQNVITIHRMI 755
+ P + V I +++
Sbjct: 497 LTPIARMYVEDIVKVV 512
>UniRef50_A6R753 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 807
Score = 103 bits (247), Expect = 6e-21
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAV-REHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
G+ CL+Q+ST + D+I+D L RE + LN VF+DPK LKV HG+ DV+WLQRD G+
Sbjct: 265 GLVCLMQLSTRDK-DWIVDTLKPWREELQVLNEVFSDPKILKVLHGSTMDVIWLQRDLGL 323
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+VGLFDTYHAA +L P SLKFL
Sbjct: 324 YIVGLFDTYHAAVALNYPKKSLKFL 348
Score = 72.9 bits (171), Expect = 1e-11
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L K+ +K Y++ADWR+RPL + YAR DTHYLLY++ ++N +IE + N++
Sbjct: 349 LEKFVNFQAEKKYQIADWRLRPLLPGMFDYARSDTHYLLYIYDHIRNDLIEHSTPSNNLI 408
Query: 436 LSVFEDSRQTCASTYNKEVIHDES 507
V E S+Q Y + V + E+
Sbjct: 409 DYVLERSKQEALQRYERPVYNAET 432
Score = 42.3 bits (95), Expect = 0.016
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +3
Query: 516 LYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNA 695
+ +R+ F +Q A + +++WRD AR DE Y+L L ++ +P + +
Sbjct: 442 MLVRNSTLFSREQFAVFRAVHQWRDKIARFEDEGVQYVLSKQSLFKIAHAMPLDPVSLLR 501
Query: 696 CCDPMPPFVKQNVITIHRMI 755
P+ P V+ + ++I
Sbjct: 502 TVSPVSPLVRARASELVQVI 521
>UniRef50_UPI0000E469F8 Cluster: PREDICTED: similar to exosome
component 10; n=4; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to exosome component 10 -
Strongylocentrotus purpuratus
Length = 819
Score = 103 bits (246), Expect = 8e-21
Identities = 44/100 (44%), Positives = 67/100 (67%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L +YC V+ DK Y+LADWRIRPLP+ ++ YAR DTHYLLY++ MKN++I++ + N+L
Sbjct: 383 LSRYCQVEADKQYQLADWRIRPLPEEMLHYAREDTHYLLYIYHTMKNELIKRGNDRRNLL 442
Query: 436 LSVFEDSRQTCASTYNKEVIHDESPYHYTYVRRRISIISK 555
+V + S + C YNK + ++S H T ++ I +K
Sbjct: 443 RAVLDQSTRICVQRYNKPIFTNDS--HVTAFQKNRKIFNK 480
Score = 100 bits (239), Expect = 6e-20
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G TCL+QIST E D+++D L +R + LN FTDPK +KVFHGA+ D+ WLQRD G+Y
Sbjct: 300 GFTCLMQISTAEH-DYVVDTLELRSELQMLNDAFTDPKIVKVFHGANMDIDWLQRDLGLY 358
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V +FDT+ A++SLG P SL L
Sbjct: 359 VVNMFDTHQASRSLGFPHHSLASL 382
Score = 95.1 bits (226), Expect = 2e-18
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = +3
Query: 510 IPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGV 689
+ + +++K F+ +QM A K L+ WRDS ARQ DEST Y+LP HML ++E LP++ G+
Sbjct: 468 VTAFQKNRKIFNKKQMHAFKKLFAWRDSLARQEDESTGYILPMHMLFQIAEILPKDQGGI 527
Query: 690 NACCDPMPPFVKQNVITIHRMIL 758
ACC+P+PP VKQN+ I+ IL
Sbjct: 528 LACCNPVPPLVKQNINEIYHFIL 550
>UniRef50_Q4P181 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1027
Score = 103 bits (246), Expect = 8e-21
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALA--VREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDF 175
QGI CL+Q+ST GD+IID L+ VR+H LN FT+P K+KV HGA+ DVLWLQRD
Sbjct: 376 QGIVCLMQLST-RWGDWIIDTLSDDVRQHAELLNSSFTNPDKVKVLHGANHDVLWLQRDL 434
Query: 176 GVYLVGLFDTYHAAKSLGLPALSLKFL 256
G+YLV LFDTYHA L P+ L +L
Sbjct: 435 GLYLVNLFDTYHATNVLMFPSHGLNYL 461
Score = 79.4 bits (187), Expect = 1e-13
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
+ +YC D DK Y+LADWRIRPLP ++ YAR DTH LL+++ ++++++E AG + +
Sbjct: 462 MARYCNFDADKRYQLADWRIRPLPKEMLYYARSDTHTLLFIYDNLRHELME--AGGIDAI 519
Query: 436 LSVFEDSRQTCASTYNKE 489
VF S+Q +TY KE
Sbjct: 520 RQVFIRSKQVATATYAKE 537
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/66 (33%), Positives = 39/66 (59%)
Frame = +3
Query: 564 LKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNVITI 743
++ L++WRD+ AR+ DES Y+L + L+ L+ P QGV AC P +K+ + +
Sbjct: 580 VRALHRWRDTVAREEDESPRYILGANNLMMLAARAPTTKQGVLACIPPNATGLKKRIDEL 639
Query: 744 HRMILS 761
+I++
Sbjct: 640 ASLIMA 645
>UniRef50_Q6C721 Cluster: Similar to sp|Q12149 Saccharomyces
cerevisiae YOR001w RRP6; n=1; Yarrowia lipolytica|Rep:
Similar to sp|Q12149 Saccharomyces cerevisiae YOR001w
RRP6 - Yarrowia lipolytica (Candida lipolytica)
Length = 738
Score = 102 bits (245), Expect = 1e-20
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GITCL+Q+S+ E D+IID +A+R ++ N V TDPK +KV HGA D+ WLQRDFG+Y
Sbjct: 257 GITCLVQVSSREQ-DYIIDTIALR-NLEIFNEVLTDPKIVKVLHGATMDIQWLQRDFGLY 314
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDT+HAA++LGL SL FL
Sbjct: 315 IVSLFDTFHAAQALGLKGHSLAFL 338
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L Y T K Y+L+DWRIRP+ + YAR DTH+LL ++ +KN +++K + +
Sbjct: 339 LQHYANFVTSKKYQLSDWRIRPMSPEQLLYARADTHFLLNIYDQLKNALVQK-----DKI 393
Query: 436 LSVFEDSRQTCASTY 480
V E SRQT + Y
Sbjct: 394 EGVLEKSRQTASQRY 408
Score = 57.2 bits (132), Expect = 5e-07
Identities = 25/69 (36%), Positives = 44/69 (63%)
Frame = +3
Query: 528 SKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDP 707
S+ + ++ K L+ WRDS AR+ DEST Y++PN++L+SL+ +P+ + V +
Sbjct: 433 SQFHITGPSVSVAKALFLWRDSMARKEDESTGYVMPNYLLVSLANRMPQTPEAVFSVSKS 492
Query: 708 MPPFVKQNV 734
+P V++NV
Sbjct: 493 LPLLVRKNV 501
>UniRef50_Q23S17 Cluster: 3'-5' exonuclease family protein; n=1;
Tetrahymena thermophila SB210|Rep: 3'-5' exonuclease
family protein - Tetrahymena thermophila SB210
Length = 881
Score = 101 bits (241), Expect = 3e-20
Identities = 48/96 (50%), Positives = 68/96 (70%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
GITCL+QIS+ D+I+D +V + +HKLN V TD +KV HGAD D+ WLQRDFG+Y
Sbjct: 280 GITCLMQISS-RTKDYIVDVFSVWKSLHKLNAVTTDKNIVKVLHGADMDIQWLQRDFGIY 338
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL**SIAALTPIKR 292
+V LFDT AA++L +P+ +L +L SI+ + K+
Sbjct: 339 IVNLFDTGQAARTLSMPSYALAYLLQSISKVPTDKK 374
Score = 81.0 bits (191), Expect = 4e-14
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Frame = +1
Query: 274 VDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK--NAGQ--TNMLLS 441
V TDK Y+LADWRIRPLP +I YAR DTHYLL ++ ++ Q++ K GQ ++ + S
Sbjct: 369 VPTDKKYQLADWRIRPLPREMISYARSDTHYLLSIYDNLRIQLVSKALQQGQNASHFIES 428
Query: 442 VFEDSRQTCASTYNKEVIHDESPYHYTYVRRRISIIS-KWRLLR 570
V SR C Y K ++ DE YH +RI + K+R+L+
Sbjct: 429 VLNKSRAICLKKYVKPILDDEK-YHSILQNQRIILSDRKFRILK 471
Score = 34.3 bits (75), Expect = 4.2
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 546 NQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPR 674
+++ LK L +WR A + DE+ T++L N +L ++ LP+
Sbjct: 464 DRKFRILKRLLEWRYKMAAKYDENPTFVLANDILFNIVNRLPQ 506
>UniRef50_A2R7H4 Cluster: Contig An16c0130, complete genome; n=15;
Eurotiomycetidae|Rep: Contig An16c0130, complete genome
- Aspergillus niger
Length = 782
Score = 99 bits (238), Expect = 7e-20
Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAV-REHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFG 178
QG+ L+QIST + D+++D L RE + LN VFTDP LKV HG+ D++WLQRD G
Sbjct: 263 QGLVSLMQISTRDK-DWVVDTLKPWREELQVLNEVFTDPNILKVLHGSSMDIIWLQRDLG 321
Query: 179 VYLVGLFDTYHAAKSLGLPALSLKFL 256
+Y+VG+FDTYHAA +L P SLKFL
Sbjct: 322 LYVVGMFDTYHAACALNYPKRSLKFL 347
Score = 77.8 bits (183), Expect = 3e-13
Identities = 30/79 (37%), Positives = 51/79 (64%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L K+ + DK Y++ADWRIRP+P+ + YAR DTHYLL+++ ++N+++E + N++
Sbjct: 348 LQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIYDHIRNELVENSLPDNNLI 407
Query: 436 LSVFEDSRQTCASTYNKEV 492
V E S++ Y + V
Sbjct: 408 DYVLEQSKKEALQVYERPV 426
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +3
Query: 516 LYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNA 695
L R+ + +Q A K +++WRD AR+ DE + P H+L ++ +P +L +
Sbjct: 441 LLSRNSVVVNREQFAVFKAVHQWRDEVAREEDEGVQCVFPKHVLFRVAHTMPLDLGTLFR 500
Query: 696 CCDPMPPFVKQNVITIHRMI 755
P+ P V+ + + +I
Sbjct: 501 TLSPVTPIVQNRAVDLLEVI 520
>UniRef50_Q5KK81 Cluster: PM-scl autoantigen, putative; n=2;
Filobasidiella neoformans|Rep: PM-scl autoantigen,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1016
Score = 98.7 bits (235), Expect = 2e-19
Identities = 49/86 (56%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIH--KLNVVFTDPKKLKVFHGADSDVLWLQRDFG 178
G TCLIQIST E D+++D LA+R+ I K VFTDP +KVFHGADSD++WLQRDF
Sbjct: 345 GFTCLIQISTRES-DWVVDTLALRKEIQQDKFGDVFTDPTIVKVFHGADSDIIWLQRDFE 403
Query: 179 VYLVGLFDTYHAAKSLGLPALSLKFL 256
+++V LFDTY A L +P SL L
Sbjct: 404 IFVVNLFDTYSACVVLEMPQRSLSAL 429
Score = 69.3 bits (162), Expect = 1e-10
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNA 417
L YC + DK Y+ ADWRIRPLPD ++ YAR DTH+LL+++ ++N ++ K++
Sbjct: 430 LQHYCNFEADKRYQRADWRIRPLPDGMLYYARSDTHFLLFIYDNLRNALLHKSS 483
Score = 38.7 bits (86), Expect = 0.19
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +3
Query: 573 LYKWRDSQARQLDESTTYLLPNHMLLSLS 659
L+ WRD AR++DES Y++PN+ML +S
Sbjct: 562 LHDWRDRVAREMDESPFYIMPNNMLRDVS 590
>UniRef50_Q01780 Cluster: Exosome component 10; n=44; Eumetazoa|Rep:
Exosome component 10 - Homo sapiens (Human)
Length = 885
Score = 97.9 bits (233), Expect = 3e-19
Identities = 39/82 (47%), Positives = 60/82 (73%)
Frame = +3
Query: 510 IPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGV 689
+ LY + KK+ + QQ+ A ++L+ WRD AR+ DES Y+LPNHM+L ++E LP+E QG+
Sbjct: 492 LELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKIAEELPKEPQGI 551
Query: 690 NACCDPMPPFVKQNVITIHRMI 755
ACC+P+PP V+Q + +H +I
Sbjct: 552 IACCNPVPPLVRQQINEMHLLI 573
Score = 95.9 bits (228), Expect = 1e-18
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G+TCL+QIST DFIID L +R ++ LN TDP +KVFHGADSD+ WLQ+DFG+Y
Sbjct: 324 GLTCLMQIST-RTEDFIIDTLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFGLY 382
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V +FDT+ AA+ L L SL L
Sbjct: 383 VVNMFDTHQAARLLNLGRHSLDHL 406
Score = 89.8 bits (213), Expect = 8e-17
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L YC VD++K Y+LADWRIRPLP+ ++ YAR DTHYLLY++ M+ ++ E+ GQ L
Sbjct: 407 LKLYCNVDSNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPVQL 466
Query: 436 LSVFEDSRQTCASTYNKEVIHDES 507
V++ SR C + K + DES
Sbjct: 467 QVVWQRSRDICLKKFIKPIFTDES 490
>UniRef50_A0EBI7 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_88,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 676
Score = 97.1 bits (231), Expect = 5e-19
Identities = 47/85 (55%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHI-HKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
GITCLIQ+ST D+IID + + + L+V+F +PK +KVFHGA++DV WLQRDFG+
Sbjct: 234 GITCLIQLST-RSQDYIIDPFPLWKQLGDMLSVIFANPKIVKVFHGAENDVQWLQRDFGL 292
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+V LFDT+HA+K L L S +FL
Sbjct: 293 YIVNLFDTFHASKELQLMQNSFQFL 317
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Frame = +1
Query: 247 QISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQT 426
Q L +YC TDKTY+ ADW RPLPD +IKYA++DTHYLLY++ M+ + + N
Sbjct: 315 QFLLSEYCKKSTDKTYQTADWTQRPLPDEMIKYAQIDTHYLLYIYDRMRQDLKKLNKPND 374
Query: 427 NM-------LLSVFEDSRQTCASTYNK 486
N+ L +V + S++T Y K
Sbjct: 375 NISNIPNYYLEAVLKRSKETALKIYKK 401
>UniRef50_Q9FFL2 Cluster: Nucleolar protein-like; n=5; Arabidopsis
thaliana|Rep: Nucleolar protein-like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 834
Score = 96.3 bits (229), Expect = 9e-19
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHK-LNVVFTDPKKLKVFHGADSDVLWLQRDFG 178
QG+TCL+QIST D+I+D +R HI L +F DPKK KV HGAD D++WLQRDFG
Sbjct: 258 QGLTCLMQIST-RTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFG 316
Query: 179 VYLVGLFDTYHAAKSLGLPALSLKFL 256
+Y+ LFDT A++ L L SL+FL
Sbjct: 317 IYVCNLFDTGQASRVLNLERNSLEFL 342
Score = 83.8 bits (198), Expect = 5e-15
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Frame = +1
Query: 214 SQVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMK 393
S+V R + L +CGV +K Y+ ADWRIRPLP+ + +YAR DTHYLLY++ ++K
Sbjct: 329 SRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDLIK 388
Query: 394 ---NQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDESPYH 516
++ + +A + LL V++ S C Y KE++ + S H
Sbjct: 389 LELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLH 432
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 540 FDNQQMAALKM-LYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPP 716
F+ Q+A + + L +WRD AR DEST Y+LPN +LL +++ +P + + P
Sbjct: 441 FNAAQLAIVAVGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHP 500
Query: 717 FVKQNVITIHRMI 755
++++NV ++ +I
Sbjct: 501 YIERNVDSVVSVI 513
>UniRef50_Q7XE52 Cluster: Nucleolar protein, putative, expressed;
n=8; Magnoliophyta|Rep: Nucleolar protein, putative,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 902
Score = 96.3 bits (229), Expect = 9e-19
Identities = 41/104 (39%), Positives = 71/104 (68%)
Frame = +1
Query: 214 SQVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMK 393
S++ + R + L +CGV +K Y+ ADWR+RPLPD +IKYAR DTHYLLY++ +M+
Sbjct: 367 SRILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDLMR 426
Query: 394 NQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDESPYHYTY 525
+++++++ + ++LL V++ S++ C Y KE++ S Y Y +
Sbjct: 427 LRLVKESSDENDLLLEVYKRSKEICLQLYEKELL-THSSYLYIH 469
Score = 90.6 bits (215), Expect = 5e-17
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHK-LNVVFTDPKKLKVFHGADSDVLWLQRDFG 178
QG+TCL+QIST DFI+D L +R+++ L +F DP K KV HGAD D++WLQRDFG
Sbjct: 296 QGLTCLMQIST-RTEDFIVDTLKLRKYLGDYLREIFKDPTKKKVMHGADRDIIWLQRDFG 354
Query: 179 VYLVGLFDTYHAAKSLGLPALSLKFL 256
+Y+ LFDT A++ L + SL+ L
Sbjct: 355 IYVCNLFDTGQASRILQMDRNSLEHL 380
Score = 56.4 bits (130), Expect = 9e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +3
Query: 516 LYIRSKKN--FDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLP 671
LYI K FD +Q++ L +YKWRDS AR DEST Y+LPN LL +++ +P
Sbjct: 466 LYIHGLKENEFDARQLSVLANIYKWRDSVARGEDESTGYILPNKTLLEIAKQMP 519
>UniRef50_Q0U8F5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 805
Score = 93.9 bits (223), Expect = 5e-18
Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAV-REHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
G+ L+QIST + D+I+D L R + LN VF DP LKV HGA D++WLQRD G+
Sbjct: 268 GMVSLMQISTRDK-DWIVDTLKPWRRKLECLNEVFADPNILKVLHGAYMDIMWLQRDLGL 326
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+VGLFDT+HAA+SLG P SL +L
Sbjct: 327 YIVGLFDTHHAARSLGYPGGSLAYL 351
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK---NAGQT 426
L ++ K Y+LADWRIRPL L +YAR DTH+LLY++ M+N+++E+ + +
Sbjct: 352 LERHVQFKAQKQYQLADWRIRPLGKELFEYARADTHFLLYIFDNMRNELVERSDFSDPEK 411
Query: 427 NMLLSVFEDSRQTCASTYNKEV 492
N + V S++ Y V
Sbjct: 412 NKVQDVLIKSKEVALQRYEHPV 433
Score = 47.6 bits (108), Expect = 4e-04
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = +3
Query: 516 LYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLP 671
L +R+ F QQ + + +++WRDS +R+ DES +++PNH + S++ +P
Sbjct: 448 LIMRTPVQFTPQQFSVFRAVHQWRDSLSRKEDESPLFIMPNHAVFSVARAMP 499
>UniRef50_A4S626 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 176
Score = 93.5 bits (222), Expect = 6e-18
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHK-LNVVFTDPKKLKVFHGADSDVLWLQRDFG 178
+G TCL+QIST E DF++D LA+R H+ L F D KLKV HGAD+DV WLQ+DFG
Sbjct: 42 KGFTCLMQISTRER-DFVVDVLALRSHVRDALGKAFADADKLKVMHGADNDVQWLQKDFG 100
Query: 179 VYLVGLFDTYHAAKSLGLPALSLKFL 256
+++ LFDT AA+ L LP+ L +L
Sbjct: 101 MFVSCLFDTGQAARVLELPSKGLAYL 126
Score = 59.7 bits (138), Expect = 1e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQI 402
L YCG+ +K ++LADWR+RPL +++YAR DTH+LLYV +K +
Sbjct: 127 LHHYCGIKANKRFQLADWRLRPLTKEMVEYARGDTHHLLYVHDRLKEAL 175
>UniRef50_UPI0000D56CFF Cluster: PREDICTED: similar to CG7292-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG7292-PA - Tribolium castaneum
Length = 377
Score = 93.1 bits (221), Expect = 9e-18
Identities = 43/85 (50%), Positives = 62/85 (72%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
+ +TCL+QIST + D+IIDA+A+++ +H LN VFT+P +K+FH A +D+ WLQ+D GV
Sbjct: 107 KALTCLVQISTPDK-DYIIDAIALKDELHALNEVFTNPDIVKIFHSAVNDLKWLQQDLGV 165
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
++V LFDT A K+LG L L L
Sbjct: 166 FVVNLFDTQIAMKALGYKKLGLDAL 190
Score = 61.7 bits (143), Expect = 2e-08
Identities = 39/105 (37%), Positives = 58/105 (55%)
Frame = +1
Query: 253 SLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNM 432
+L++ V DKT + D+R RPLP YAR+D+HYL+ + +KN++IE N+
Sbjct: 189 ALLQDYHVAKDKTMQRQDFRRRPLPPKFKDYARVDSHYLIGFYHKLKNELIE-----ANL 243
Query: 433 LLSVFEDSRQTCASTYNKEVIHDESPYHYTYVRRRISIISKWRLL 567
L +V +D C Y K + DE+ Y VRR + I K +LL
Sbjct: 244 LRAVLDDCNNCCKILYPK--VEDEA---YLSVRRNVEEIHKRQLL 283
>UniRef50_A4RDR3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 854
Score = 93.1 bits (221), Expect = 9e-18
Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAV-REHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
G+ L+QIST E D+I+D L R+ + LN VF DP +KVFHGA D++WLQRD G+
Sbjct: 293 GLLSLMQISTREK-DWIVDTLKPWRQQLEILNEVFADPSIVKVFHGAFMDIVWLQRDLGL 351
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+VGLFDT+HAA++L P+ SL +L
Sbjct: 352 YVVGLFDTFHAAEALMYPSKSLAYL 376
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAG---QT 426
L K+ + DK Y+ ADWRIRPLP+ ++ YAR DTHYLLYV+ +M+N+++ ++
Sbjct: 377 LKKFVDFEADKRYQTADWRIRPLPEEMLYYARSDTHYLLYVYDMMRNELLRQSVSGDPHR 436
Query: 427 NMLLSVFEDSRQTCASTYNKEVIHDES 507
++L + S+ T Y I E+
Sbjct: 437 DLLERTLQRSKDTALQRYEAYTIDGET 463
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3
Query: 525 RSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCD 704
R F +Q + + L+KWRD AR+ DES +L+ N +L+ ++ +P +
Sbjct: 476 RLPNTFSREQFSVYRALHKWRDDVARREDESPMFLMSNQLLVDIARAMPETANDLRRLFT 535
Query: 705 PMPPFVKQNV 734
+ P V+ V
Sbjct: 536 NVGPPVRNAV 545
>UniRef50_Q4PL82 Cluster: Putative uncharacterized protein; n=3;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 327
Score = 91.5 bits (217), Expect = 3e-17
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G T LIQIST E DF++D +A+ + + L VF+DP KVFHGAD+DV+WLQRDF +Y
Sbjct: 155 GFTALIQISTHEE-DFLVDTIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIY 213
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V +FDT A + L P SL +L
Sbjct: 214 VVNMFDTAKACEVLSKPQRSLAYL 237
Score = 56.8 bits (131), Expect = 7e-07
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +1
Query: 220 VTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQ 399
+++ R+ A + L CGV T+K + DWR RPL + +++YAR D HYLLY+ + +
Sbjct: 227 LSKPQRSLAYL-LETVCGVATNKLLQREDWRQRPLSEEMVRYARXDAHYLLYIADSLTTE 285
Query: 400 IIEKNAGQT------NMLLSVFEDSRQTCASTYNKE 489
+ + + + LL S TC Y KE
Sbjct: 286 LKQLATDSSSPDDRFHFLLEASRRSNMTCLQLYTKE 321
>UniRef50_Q00XJ4 Cluster: Exosome 3'-5' exoribonuclease complex,
subunit PM/SCL-100; n=1; Ostreococcus tauri|Rep: Exosome
3'-5' exoribonuclease complex, subunit PM/SCL-100 -
Ostreococcus tauri
Length = 701
Score = 91.1 bits (216), Expect = 3e-17
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHK-LNVVFTDPKKLKVFHGADSDVLWLQRDFG 178
+G TCL+Q+ST E DF++D LA+R + L F DP LKV HGAD+DV WLQ+DFG
Sbjct: 154 KGFTCLMQVSTREK-DFVVDVLALRSLVRDALGKAFADPNTLKVMHGADNDVQWLQKDFG 212
Query: 179 VYLVGLFDTYHAAKSLGLPALSLKFL 256
+++ LFDT AA+ L LP+ +L +L
Sbjct: 213 IFVSCLFDTGQAARVLELPSKALAYL 238
Score = 70.1 bits (164), Expect = 7e-11
Identities = 35/95 (36%), Positives = 52/95 (54%)
Frame = +1
Query: 232 ARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
++A A + L YCG+ +K ++LADWR+RPL ++ YAR DTHYLLYV+ +K + +
Sbjct: 232 SKALAYL-LQHYCGIKANKKFQLADWRVRPLTREMLDYARGDTHYLLYVYDELKKALAAR 290
Query: 412 NAGQTNMLLSVFEDSRQTCASTYNKEVIHDESPYH 516
N + + SR C Y DE Y+
Sbjct: 291 G---ENSIAATLTQSRDVCLKKYLPPTF-DEGSYY 321
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 537 NFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPP 716
N ++ Q+A L+KWRD+ AR+ DES Y++P ++L L+ P + + C P
Sbjct: 332 NLNDPQLAVYAALFKWRDAAAREADESLGYVMPRELMLRLAIAAPSTKRALMEECRGQVP 391
Query: 717 FVKQNVITIHRMI 755
+ ++ T+ +I
Sbjct: 392 LIAKHAETVADLI 404
>UniRef50_A7PX27 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 933
Score = 89.8 bits (213), Expect = 8e-17
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G T LIQIST + D+++D +A+ + + L VF +P KVFHGAD+DVLWLQRDF +Y
Sbjct: 149 GFTALIQIST-QNEDYLVDTIALHDTLDVLQPVFANPSICKVFHGADNDVLWLQRDFHIY 207
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDT A + L P SL +L
Sbjct: 208 VVNLFDTAKACEVLSKPQKSLAYL 231
Score = 53.2 bits (122), Expect = 8e-06
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRV----MKNQIIEKNAGQ 423
L YCGV T+K + DWR RPL +++YA+ D HYLLY+ ++ E +
Sbjct: 232 LETYCGVATNKLLQREDWRQRPLSVEMLEYAQTDAHYLLYIANCLIAELRQHDSENSCCP 291
Query: 424 TNMLLSVFEDSRQT---CASTYNKEV 492
+ L V E SR++ C Y KE+
Sbjct: 292 DDKLRFVLEASRRSNTVCLQLYIKEI 317
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 528 SKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLP 671
S K D Q + ++ L WRD AR DES Y+L + +++L++ +P
Sbjct: 341 SSKACDLQDL--VRRLCTWRDLMARVHDESLRYVLSDQAIIALADKVP 386
>UniRef50_A6SCE7 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 823
Score = 89.8 bits (213), Expect = 8e-17
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAV-REHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
G+ L+Q+ST E D+I+D L R+ + LN VF DP +KVFHGA D++WLQRD G+
Sbjct: 259 GLVSLMQVSTREK-DWIVDTLKPWRQQLQVLNEVFADPNIIKVFHGAYMDIVWLQRDLGL 317
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+VGLFDT++A + LG SL FL
Sbjct: 318 YVVGLFDTHYACRRLGFAGGSLAFL 342
Score = 70.1 bits (164), Expect = 7e-11
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQI-----IEKNAG 420
L KY D DK Y+LADWRIRPLP+ + YAR DTH+LLY++ ++N++ +E
Sbjct: 343 LKKYIDFDADKKYQLADWRIRPLPEEMFFYARADTHFLLYIFDNLRNELLDAPDVETPDA 402
Query: 421 QTNMLLS---VFEDSRQTCASTYNKEVIHDES 507
+T S V + S++T Y +++ + ES
Sbjct: 403 ETPAATSMDIVLQKSKETSLLRYERQLYNAES 434
Score = 37.9 bits (84), Expect = 0.34
Identities = 15/60 (25%), Positives = 37/60 (61%)
Frame = +3
Query: 546 NQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVK 725
++Q + K ++ WRD AR+ D+S +++ N ++++L++ +P ++ + + P+ VK
Sbjct: 454 SEQFSVFKAVHAWRDQIARKDDDSINFVMSNSVVVNLAKFMPMDMIALLSIIRPISHSVK 513
>UniRef50_UPI000023ED22 Cluster: hypothetical protein FG06049.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06049.1 - Gibberella zeae PH-1
Length = 807
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREH-IHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
G+ L+QIST E D+I+D L H + LN VFT+PK +KVFHGA D++WLQRD G+
Sbjct: 258 GLVSLMQISTREK-DWIVDTLQPWRHKLEVLNQVFTNPKIVKVFHGAYMDIIWLQRDLGL 316
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+ GLFDT+ A L PA SL +L
Sbjct: 317 YVNGLFDTFFACGQLNYPAKSLAYL 341
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Frame = +1
Query: 217 QVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKN 396
Q+ A++ A + L K+ D DK Y+LADWR+RPLP ++ YAR DTHYLLY++ ++N
Sbjct: 330 QLNYPAKSLAYL-LSKFVDFDADKKYQLADWRLRPLPQEMLYYARSDTHYLLYIYDRVRN 388
Query: 397 QII---EKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDES 507
+++ +K +++ E SR+ S Y +E+
Sbjct: 389 ELVAASDKTDADKDLIGRALEKSREQSLSRYEHPDYDEET 428
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/60 (30%), Positives = 36/60 (60%)
Frame = +3
Query: 516 LYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNA 695
++ S FD++Q + + L+KWRD AR+ DEST ++L N + ++ P + + +++
Sbjct: 439 IFKNSHMAFDSEQFSVFRALWKWRDDTARKEDESTNFVLGNRDISEIARINPPDAKALHS 498
>UniRef50_A7AVN6 Cluster: Exosome component 10, putative; n=1;
Babesia bovis|Rep: Exosome component 10, putative -
Babesia bovis
Length = 879
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
+G CL+QI T D++ID ++ + + +LN V TDP+ LKV HGA+SD+LWLQRDFGV
Sbjct: 351 RGFVCLVQI-TGADDDWVIDPFSIFDEMWRLNDVTTDPRILKVMHGAESDILWLQRDFGV 409
Query: 182 YLVGLFDTYHAAKSLGL 232
Y+V LFDT AA L L
Sbjct: 410 YVVNLFDTLKAADVLCL 426
Score = 62.1 bits (144), Expect = 2e-08
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKN 414
+ G+ DK+Y+LADWRIRP+P ++ YA DTHYLL ++ +KN +E++
Sbjct: 439 FLGIHLDKSYQLADWRIRPIPRDMLTYATADTHYLLDLYSALKNTALEQD 488
>UniRef50_Q2GQW9 Cluster: Putative uncharacterized protein; n=2;
Sordariales|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 827
Score = 87.0 bits (206), Expect = 6e-16
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREH-IHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
G+ L+QIST E D+IID L H + LN VF DPK +KV HGA D++WLQRD G+
Sbjct: 263 GLLSLMQISTREK-DWIIDTLVPWRHKLEVLNEVFADPKIVKVLHGAFMDIIWLQRDLGL 321
Query: 182 YLVGLFDTYHAAKSLGLPALSLKFL 256
Y+VGLFDT++A+ +L SL FL
Sbjct: 322 YVVGLFDTFYASTALQYAGKSLAFL 346
Score = 68.9 bits (161), Expect = 2e-10
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKN---QIIEKNAGQT 426
L K+ D DK Y+LADWR+RPLP+ + YAR DTH+LLY++ +++N Q+ +N
Sbjct: 347 LKKFVDFDADKKYQLADWRLRPLPEEMFYYARSDTHFLLYIYDMLRNELAQLATQNGSDG 406
Query: 427 NMLLSVFEDSRQTCASTYNKEVIHDES 507
+ V + S++ Y E+
Sbjct: 407 HPTDRVIQKSKEVALQRYENSFCDPET 433
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = +3
Query: 525 RSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGV 689
+S +D++Q A K ++KWRD ARQ DES +++ +L +++ +P +++ +
Sbjct: 446 KSSTLYDSEQFAVYKAVHKWRDDIARQEDESPFFIMTQQVLSNIARIMPTDMKAL 500
>UniRef50_Q4UC54 Cluster: 3'-5' exonuclease, putative; n=2;
Theileria|Rep: 3'-5' exonuclease, putative - Theileria
annulata
Length = 790
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
+G CL+Q+ST + ++IID + ++KLN + TDPK LK+ HGA +DV+WLQRDF +
Sbjct: 512 RGFICLLQLSTPQE-NYIIDPFKIFGKMNKLNRLTTDPKILKIMHGACNDVIWLQRDFNI 570
Query: 182 YLVGLFDTYHAAKSLGLPALSL 247
++V LFDT AA L LP SL
Sbjct: 571 FVVNLFDTREAAIVLNLPEQSL 592
Score = 55.6 bits (128), Expect = 2e-06
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 202 HIPRSQVTRSARAFAQISLMKYCGVDT-DKTYRLADWRIRPLPDVLIKYARMDTHYLLYV 378
++P + + + + I L K + K+Y + IRPL D ++ YA D+HYL+ +
Sbjct: 586 NLPEQSLAKLVQKYFNIKLNKRFQISNWSKSYNCLNCGIRPLDDEMLDYACCDSHYLIPL 645
Query: 379 WRVMKNQIIEKNAGQTNMLLSVFEDSRQTCASTY 480
+ +K++I+ K G+ ++ V + R+TC Y
Sbjct: 646 YNTLKDEILSKEDGRVK-IIQVMNNGRETCLKQY 678
>UniRef50_Q4DSE3 Cluster: Ribosomal RNA processing protein 6,
putative; n=3; Trypanosoma|Rep: Ribosomal RNA processing
protein 6, putative - Trypanosoma cruzi
Length = 768
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
QG TCL+QIST D +ID L +R +H L VF +P LKV HGA D+ WLQ+DFG+
Sbjct: 303 QGFTCLMQIST-RSEDILIDCLKLRSSMHLLAPVFLNPNILKVLHGAREDIRWLQKDFGL 361
Query: 182 YLVGLFDTYHAAKSLGLP 235
YLV FDT A ++L +P
Sbjct: 362 YLVNFFDTGIALQTLHMP 379
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQII--EKNAGQTNMLL 438
+C V DK Y+ ADWRIRP+P + YAR DTH+LLYV+ +K ++ E A N+L+
Sbjct: 389 FCQVKLDKKYQTADWRIRPIPAEMATYARQDTHFLLYVYDRLKTLLLNSEGRASIGNLLV 448
Query: 439 SVFEDSRQTCASTYNKEVIHDESPY 513
V +SR+ Y K + ++ Y
Sbjct: 449 HVLNESRRLSLEIYEKPQLDPDASY 473
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +3
Query: 525 RSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCD 704
RS + QM + ++ WRD+ AR++D+S +L +L+++ LP V CC
Sbjct: 479 RSLGGLSSMQMKVAREIFNWRDAIAREVDDSPPAVLHLSAVLAIATKLPTSANDVLKCCT 538
Query: 705 PMPPFVKQNVITIHRMI 755
P+ V+ NV + +++
Sbjct: 539 PVSMVVRTNVTRLVQIV 555
>UniRef50_Q4Q2N6 Cluster: Exosome subunit rrp6p homologue, putative;
n=3; Leishmania|Rep: Exosome subunit rrp6p homologue,
putative - Leishmania major
Length = 742
Score = 83.8 bits (198), Expect = 5e-15
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
QG TCL+QIST E DFI+D L +R + L VF +P LKV HGA D+ WLQ+DF +
Sbjct: 267 QGFTCLMQISTREE-DFIVDCLKLRSSMGALAPVFLNPSILKVLHGAREDIRWLQKDFSL 325
Query: 182 YLVGLFDTYHAAKSLGLPALSLKF 253
Y+V LFDT A ++L +P SL F
Sbjct: 326 YVVNLFDTGVALQTLHMP-YSLAF 348
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQII--EKNAGQTNMLL 438
+C V +K Y+ ADWR+RPL ++ YAR DTH+LLYV +K ++ E A ++L+
Sbjct: 353 FCQVKLNKKYQTADWRVRPLSAEMVHYARQDTHFLLYVHDRLKALLLNSEGRASIGSVLV 412
Query: 439 SVFEDSRQTCASTYNKEVIHDESPY 513
V+ +S+Q Y K + E Y
Sbjct: 413 HVYNESKQLSLQIYEKPNVVPEETY 437
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 525 RSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCD 704
RS + Q + ++ WRDS AR++D+S T +L +LS++ LP + + CC
Sbjct: 443 RSLSGLNKVQEKVARDVFNWRDSAAREVDDSPTAVLHLSSVLSIASKLPTTAKALLRCCA 502
Query: 705 PMPPFVKQNV 734
P V+ NV
Sbjct: 503 PATAVVRDNV 512
>UniRef50_UPI00004994B5 Cluster: PM-Scl autoantigen-related protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: PM-Scl
autoantigen-related protein - Entamoeba histolytica
HM-1:IMSS
Length = 319
Score = 81.4 bits (192), Expect = 3e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G CL+QIST D+IID + +R+ I LN FT+P KVFHG D D++WL +FG+Y
Sbjct: 25 GFVCLLQIST-RSSDYIIDTITLRDSITLLNDPFTNPNIEKVFHGCDFDMIWLSYNFGLY 83
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V D+ A++L L SLK+L
Sbjct: 84 VVNCIDSGQCARALKLQHFSLKYL 107
Score = 76.6 bits (180), Expect = 8e-13
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNML 435
L KYC VD DK Y+LADWR+RPL +I+YAR DTHYLLY+ ++N+ I+ AG +L
Sbjct: 108 LQKYCNVDADKKYQLADWRLRPLTKEMIEYARGDTHYLLYIIDQLRNECID--AG---VL 162
Query: 436 LSVFEDSRQTCASTYNKEVIHDE 504
V S + C + V D+
Sbjct: 163 EEVLNKSNELCLRLFRPTVCSDD 185
Score = 38.3 bits (85), Expect = 0.26
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 552 QMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPF 719
Q K LY RD AR DES ++ ML ++ LP +L+ + CC P P+
Sbjct: 200 QFDTFKKLYLLRDKIARIEDESPEAVINMTMLSNIVNELPTDLEKLRLCCLPKVPY 255
>UniRef50_Q5CS61 Cluster: RRPp/PMC2 like exosome 3'-5'
exoribonuclease subunit with an RNAseD domain and an
HRDc domain; n=2; Cryptosporidium|Rep: RRPp/PMC2 like
exosome 3'-5' exoribonuclease subunit with an RNAseD
domain and an HRDc domain - Cryptosporidium parvum Iowa
II
Length = 957
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/86 (48%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
+G LIQ+ST D+IID + I LN + +PK LKV HG+D D++WLQRDF V
Sbjct: 317 KGFVSLIQLST-RTHDYIIDPFNLFNEIQMLNELTANPKILKVLHGSDYDIIWLQRDFSV 375
Query: 182 YLVGLFDTYHAAKSLGLP-ALSLKFL 256
Y+V +FDT AA+ L P SLK L
Sbjct: 376 YIVNMFDTGQAARILNTPGGYSLKNL 401
Score = 70.1 bits (164), Expect = 7e-11
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQII 405
YC +D DK ++LADWR RPL + LI+YAR DTHYLLY++ +MKN ++
Sbjct: 405 YCSLDIDKRFQLADWRERPLSNELIEYARGDTHYLLYIYDIMKNLLL 451
Score = 34.3 bits (75), Expect = 4.2
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 573 LYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNVITIHRM 752
L+ WRDS AR LD S +Y+L M++ + + P + +P +K++ I +
Sbjct: 569 LFIWRDSIARLLDVSPSYVLKESMIIKICQKQPMNSVEILGLYPNIPVNIKKHSDHILNI 628
Query: 753 ILSFAN 770
+ + N
Sbjct: 629 VTTVKN 634
>UniRef50_Q8LMQ9 Cluster: Putative nucleolar protein; n=2; Oryza
sativa|Rep: Putative nucleolar protein - Oryza sativa
subsp. japonica (Rice)
Length = 523
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHK-LNVVFTDPKKLKVFHGADSDVLWLQRDFG 178
QG+TCL+QIST DF++D L +R +I L F DP K KV HGAD D++WLQRDF
Sbjct: 180 QGLTCLMQIST-RTEDFVVDTLKLRIYIGLYLKEHFKDPTKRKVMHGADRDIMWLQRDFH 238
Query: 179 VYLVGLFDTYHAAK 220
+Y+ LFDT K
Sbjct: 239 IYVCNLFDTGQVQK 252
Score = 55.6 bits (128), Expect = 2e-06
Identities = 24/73 (32%), Positives = 44/73 (60%)
Frame = +3
Query: 516 LYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNA 695
+Y + + D +Q+A + L++WRD AR++DEST Y+LPN L+ +++ +P + +
Sbjct: 275 IYGLQEHDLDAKQLAVVYALHQWRDYIAREVDESTGYVLPNKALIEIAKKMPTDTAELKR 334
Query: 696 CCDPMPPFVKQNV 734
PFV +N+
Sbjct: 335 MVKSKYPFVDENL 347
>UniRef50_A1I9P1 Cluster: Ribonuclease D, putative; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Ribonuclease D,
putative - Candidatus Desulfococcus oleovorans Hxd3
Length = 382
Score = 66.9 bits (156), Expect = 6e-10
Identities = 36/78 (46%), Positives = 49/78 (62%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CLIQI + G F+ID LA+ + + L F DP +KV HGAD DV L RDFG+ + G
Sbjct: 48 CLIQIGVN-GDAFLIDPLALSD-LSSLKPFFADPGVIKVLHGADYDVRSLYRDFGITITG 105
Query: 194 LFDTYHAAKSLGLPALSL 247
LFD+ A++ LG+ + L
Sbjct: 106 LFDSEIASRFLGVQSTGL 123
Score = 43.6 bits (98), Expect = 0.007
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 271 GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQI 402
GV DK R DW RPLP+ ++ YA +D YL+ ++ ++N++
Sbjct: 132 GVTMDKGCRKQDWTQRPLPEKMLSYAALDVRYLVDLYHQLQNEL 175
>UniRef50_UPI00006CF2A3 Cluster: 3''''-5'''' exonuclease family
protein; n=1; Tetrahymena thermophila SB210|Rep:
3''''-5'''' exonuclease family protein - Tetrahymena
thermophila SB210
Length = 964
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKL--NVVFTDPKKLKVFHGADSDVLWLQRDFG 178
G C IQIST DF+IDA+A+R I++L +F + K+K+ HG ++D+ WL+ DF
Sbjct: 791 GFVCTIQIST-VNMDFMIDAMALRNQINQLLNKSLFLNKTKIKILHGCENDIKWLKNDFD 849
Query: 179 VYLVGLFDTYHA 214
+ +V LFDT A
Sbjct: 850 IDIVNLFDTMFA 861
Score = 61.3 bits (142), Expect = 3e-08
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKN 414
Y GV+ DK+Y+++DWRIRPLP ++ YAR+D+ LL ++ +MK + KN
Sbjct: 881 YLGVELDKSYQISDWRIRPLPTPMMNYARVDSFILLRLFPIMKQMLTSKN 930
>UniRef50_A0LFB2 Cluster: 3'-5' exonuclease; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: 3'-5' exonuclease -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 295
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/78 (47%), Positives = 49/78 (62%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CLIQIS+ E D+IID L++++ + L +F +P+ KV H A +DVL L+RDF G
Sbjct: 43 CLIQISSPER-DYIIDPLSLKD-LSVLGRLFENPRIEKVLHAASNDVLGLRRDFQFRFNG 100
Query: 194 LFDTYHAAKSLGLPALSL 247
LFDT A K LG L L
Sbjct: 101 LFDTAIACKLLGYKQLGL 118
Score = 39.5 bits (88), Expect = 0.11
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 175 RRVFGGSFRHIPRSQVTRSARAFAQISLMK----YCGVDTDKTYRLADWRIRPLPDVLIK 342
RR F F + + + + Q+ L K + GV +K ++ DW RPL +
Sbjct: 91 RRDFQFRFNGLFDTAIACKLLGYKQLGLSKILETHFGVSLNKRWQRYDWGKRPLVPDQLD 150
Query: 343 YARMDTHYLL 372
YAR+DTHYL+
Sbjct: 151 YARLDTHYLI 160
>UniRef50_Q69RB5 Cluster: Polymyositis/scleroderma autoantigen
2-like; n=2; Oryza sativa|Rep: Polymyositis/scleroderma
autoantigen 2-like - Oryza sativa subsp. japonica (Rice)
Length = 1031
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
YCGV TDKT + DWR+RPL +I+YAR D HYLLY+ + +++ K
Sbjct: 349 YCGVTTDKTMQREDWRLRPLTPEMIQYARCDAHYLLYIANCLASELHAK 397
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 128 VFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFL 256
+FHGAD+DVLWLQRDF +Y+V +FDT A + L P SL +L
Sbjct: 303 IFHGADNDVLWLQRDFHIYVVNMFDTAKACEVLSKPQKSLAYL 345
Score = 33.1 bits (72), Expect = 9.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 582 WRDSQARQLDESTTYLLPNHMLLSLSENLPR 674
WRD AR DES Y+L + + SL+ ++PR
Sbjct: 430 WRDLMARMHDESLRYVLSDQAIASLAVSVPR 460
>UniRef50_UPI0000D56498 Cluster: PREDICTED: similar to CG7292-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG7292-PA - Tribolium castaneum
Length = 317
Score = 61.3 bits (142), Expect = 3e-08
Identities = 38/98 (38%), Positives = 54/98 (55%)
Frame = +1
Query: 274 VDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFED 453
V DKT + D+R RPLP YAR+D+HYL+ + +KN++IE N+L +V +D
Sbjct: 198 VAKDKTMQRQDFRRRPLPPKFKDYARVDSHYLIGFYHKLKNELIE-----ANLLRAVLDD 252
Query: 454 SRQTCASTYNKEVIHDESPYHYTYVRRRISIISKWRLL 567
C Y K + DE+ Y VRR + I K +LL
Sbjct: 253 CNNCCKILYPK--VEDEA---YLSVRRNVEEIHKRQLL 285
Score = 39.1 bits (87), Expect = 0.15
Identities = 16/32 (50%), Positives = 26/32 (81%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLN 97
+ +TCL+QIST + D+IIDA+A+++ +H LN
Sbjct: 163 KALTCLVQISTPDK-DYIIDAIALKDELHALN 193
>UniRef50_A5K3R1 Cluster: 3'-5' exonuclease domain containing
protein; n=1; Plasmodium vivax|Rep: 3'-5' exonuclease
domain containing protein - Plasmodium vivax
Length = 1114
Score = 59.7 bits (138), Expect = 1e-07
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
+G T LI + T+E D+I+DAL + E +H LN V TDP LK+ + + S + +QRDF +
Sbjct: 497 RGFTSLILVGTEEC-DYILDALHIFEQMHALNEVTTDPNILKIVYKSKSIIPVMQRDFSI 555
Query: 182 YLVGLFD 202
Y V + D
Sbjct: 556 YFVNIID 562
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/73 (20%), Positives = 38/73 (52%)
Frame = +3
Query: 564 LKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNVITI 743
++ + WR+ A++ DES ++ H ++S+ N+P + + PM + +N+ +
Sbjct: 761 IENILTWREKLAKKNDESPDSIINIHTIISIILNMPTSISSLKNNIIPMSNLMSENLEAL 820
Query: 744 HRMILSFANCRRT 782
+I+ + ++T
Sbjct: 821 FEIIIKSSLKKKT 833
>UniRef50_Q241P8 Cluster: 3'-5' exonuclease family protein; n=2;
Eukaryota|Rep: 3'-5' exonuclease family protein -
Tetrahymena thermophila SB210
Length = 722
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAV--REHIHK-LNVVFTDPKKLKVFHGADSDVLWLQRD 172
+G CLIQISTD+ D++ID L + ++ I++ L+ VF +K+F+ D+LWL+RD
Sbjct: 60 EGFLCLIQISTDQN-DYLIDVLGINSKQGINECLSKVFLCKDIIKIFYAGQQDILWLKRD 118
Query: 173 FGVYLVGLFDTYHAAKSL 226
F + +V FD A L
Sbjct: 119 FDLSVVNYFDVKECASFL 136
>UniRef50_A7HCG7 Cluster: 3'-5' exonuclease precursor; n=2;
Anaeromyxobacter|Rep: 3'-5' exonuclease precursor -
Anaeromyxobacter sp. Fw109-5
Length = 296
Score = 57.2 bits (132), Expect = 5e-07
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+Q+ST D+I+D LAV L V D ++ V HGAD DV L+R++G +L
Sbjct: 49 CLLQVST-RAADYIVDPLAVDPS--PLGEVLCDGRET-VLHGADYDVRCLRREYGWHLPR 104
Query: 194 LFDTYHAAKSLGLPALSLKFL 256
LFDT AA+ LG L L L
Sbjct: 105 LFDTMAAARRLGRQGLGLSAL 125
Score = 40.3 bits (90), Expect = 0.064
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 271 GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLL 372
GV KT++ +DW RPL + YA +DTHYLL
Sbjct: 131 GVRLSKTFQRSDWGQRPLTAAQLAYAALDTHYLL 164
>UniRef50_Q23PU6 Cluster: 3'-5' exonuclease family protein; n=1;
Tetrahymena thermophila SB210|Rep: 3'-5' exonuclease
family protein - Tetrahymena thermophila SB210
Length = 634
Score = 57.2 bits (132), Expect = 5e-07
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G C ++IST + D+IID L++R IH+L +F D + +K+ + WL RDFG+
Sbjct: 128 GFVCFLEISTIDQ-DYIIDCLSLRNEIHRLKEIFLDKQIVKITLDLQEKINWLYRDFGIL 186
Query: 185 -LVGLFDTYHAAKSLGLPAL 241
+V D K L LP++
Sbjct: 187 NIVNSIDLSLYLKELNLPSI 206
Score = 33.9 bits (74), Expect = 5.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 534 KNFDNQQMAALKMLYKWRDSQARQLDESTTYLLP 635
+N++ QQ L+ + KWR +A+ DES Y+ P
Sbjct: 305 RNYNEQQQYFLRKILKWRIQRAKLEDESVEYIFP 338
>UniRef50_Q3A7R1 Cluster: RNase D; n=2; Desulfuromonadales|Rep:
RNase D - Pelobacter carbinolicus (strain DSM 2380 / Gra
Bd 1)
Length = 375
Score = 56.4 bits (130), Expect = 9e-07
Identities = 33/72 (45%), Positives = 42/72 (58%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+QIST ++D LAV E + L V DP K+FH AD D+ L RDF + + G
Sbjct: 43 CLLQISTSTR-TVLVDPLAV-EDLAALAPVLADPTIRKIFHAADYDIRCLFRDFRIEVQG 100
Query: 194 LFDTYHAAKSLG 229
LFDT A + LG
Sbjct: 101 LFDTMIACQMLG 112
Score = 42.7 bits (96), Expect = 0.012
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +1
Query: 172 FRRVFGGSFRHIPRSQVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYAR 351
FR G F + Q+ R L KY V+ DK Y+ ADW RPL + +I YA
Sbjct: 94 FRIEVQGLFDTMIACQMLGEKRVGLADVLAKYLDVELDKRYQRADWSKRPLEEGMILYAM 153
Query: 352 MDTHYLLYVWRVMKNQI 402
DT +L + +++ ++
Sbjct: 154 EDTCHLHRLTEILEGRL 170
>UniRef50_Q8EYX1 Cluster: Ribonuclease D; n=4; Leptospira|Rep:
Ribonuclease D - Leptospira interrogans
Length = 421
Score = 54.4 bits (125), Expect = 4e-06
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CLIQIS +G ++IID L + +++ L +F D K LK+FH A D+ L++DFG
Sbjct: 79 CLIQISA-KGKNYIIDPLKL-QNLESLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQN 136
Query: 194 LFDTYHAAKSLGLPALSLKFL 256
+ DT +++ L SL +L
Sbjct: 137 IADTGFSSRLLDHEQYSLTYL 157
Score = 41.5 bits (93), Expect = 0.028
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 175 RRVFGGSFRHIPRSQVTRSARAFAQISLMK----YCGVDTDKTYRLADWRIRPLPDVLIK 342
++ FG F++I + + Q SL Y + K + ++W RPL ++
Sbjct: 127 KKDFGFQFQNIADTGFSSRLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQ 186
Query: 343 YARMDTHYLLYVWRVMKNQIIEKN 414
YA +DT YL +W MK ++I++N
Sbjct: 187 YAALDTVYLETIWEKMKEELIKRN 210
>UniRef50_A0CQJ2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 733
Score = 54.4 bits (125), Expect = 4e-06
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKL-NV---VFTDPKKLKVFHGADSDVLWLQRD 172
G ++QI DE +IID + + KL NV +F D K +KVF+ +DVLWL+RD
Sbjct: 74 GQISIVQIKDDEDV-YIIDVIEIGVDNQKLINVFKQIFEDDKIIKVFYAGSTDVLWLKRD 132
Query: 173 FGVYLVGLFDTYHAAKSLGLPALSLKFL 256
F + + FD A L +SL FL
Sbjct: 133 FQITIQNFFDIKEVADECKLSKISLIFL 160
Score = 34.3 bits (75), Expect = 4.2
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 262 KYCGVDTDKTYRL----ADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTN 429
+YC K+Y+ +DW RPL + YA D +YL Y+ V+ ++ + + + +
Sbjct: 163 QYCDHQVSKSYKTNMQTSDWAERPLTQEQLIYAAYDCYYLPYLRYVLLEELSKADIKKQS 222
Query: 430 MLLSVFEDSRQTCASTYNKEVIHDE 504
+ FE + Y K ++ ++
Sbjct: 223 KIQKKFE---KAILKDYKKPILSNQ 244
>UniRef50_Q74G09 Cluster: Ribonuclease D, putative; n=6;
Desulfuromonadales|Rep: Ribonuclease D, putative -
Geobacter sulfurreducens
Length = 381
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/72 (44%), Positives = 41/72 (56%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CLIQ + G I+D LA + I L +F + KVFHGAD D+ L RDFG+ +
Sbjct: 47 CLIQFAVP-GYAAIVDPLAAPD-ISPLAPLFANAAIRKVFHGADYDIRSLHRDFGIEVNN 104
Query: 194 LFDTYHAAKSLG 229
LFDT A + LG
Sbjct: 105 LFDTMIACQLLG 116
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
L K GV+ DK Y+ ADW RPL +I+YA DT L+ ++R + ++ EK
Sbjct: 126 LRKRFGVELDKQYQRADWSRRPLTVGMIEYAVKDTTLLIELYRQLVAELEEK 177
Score = 39.9 bits (89), Expect = 0.084
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 468 RLYIQ*RGDSRREPIPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHML 647
R+ + RGD EP L + D + +A L+ L +RD +ARQ D +L +
Sbjct: 192 RVRVAERGD---EPFFLRFKGASRMDGRTLAVLEELLLFRDGRARQFDVPPFKVLGTDTV 248
Query: 648 LSLSE---NLPRELQGVNACCD 704
L+E LP ELQG+ D
Sbjct: 249 RELAERRPRLPEELQGITGLTD 270
>UniRef50_Q22AH5 Cluster: 3'-5' exonuclease family protein; n=1;
Tetrahymena thermophila SB210|Rep: 3'-5' exonuclease
family protein - Tetrahymena thermophila SB210
Length = 1087
Score = 51.6 bits (118), Expect = 3e-05
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIH-KLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLV 190
C +Q+ST +F+ID L + + + L +F PK +KVFHG ++D+ L++D LV
Sbjct: 916 CTLQLST-LSSNFVIDILNLSKSVSVHLKSIFESPKFVKVFHGGETDLKLLKKDLNFNLV 974
Query: 191 GLFDTYHA-------AKSLGLPALSLKFL 256
+FDT A A S+ L +LS ++L
Sbjct: 975 NIFDTAKAYLKQNKGAGSVSLSSLSQQYL 1003
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKN 414
+Y + DK Y+ +DWRIRPLP ++ YA D+ L ++ VMK+ I +++
Sbjct: 1001 QYLNYNVDKQYQTSDWRIRPLPKPMLNYAMYDSFITLILFFVMKSTISQED 1051
>UniRef50_Q8IKX8 Cluster: 3'-5' exonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: 3'-5' exonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1136
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGV 181
+G T +I I T+ ++IID + E ++ +N + TDP LK+ + A + + LQ+DF +
Sbjct: 577 RGFTSIIMIGTNNM-NYIIDVFNMFEDLYIINDITTDPNILKITYNAPNIINQLQKDFSI 635
Query: 182 YLVGLFD 202
Y V +FD
Sbjct: 636 YFVNIFD 642
Score = 33.5 bits (73), Expect = 7.3
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 570 MLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNVITIHR 749
+LY WR+ A++LDE+ ++ H ++S+ N+ L + P+ + +N+ T+
Sbjct: 844 ILY-WREELAKKLDEAPDSIINIHNIISILLNMSTTLSSLKNNIIPLSNIISENLETLLE 902
Query: 750 MIL 758
+I+
Sbjct: 903 III 905
>UniRef50_A0W889 Cluster: 3'-5' exonuclease; n=1; Geobacter lovleyi
SZ|Rep: 3'-5' exonuclease - Geobacter lovleyi SZ
Length = 381
Score = 50.0 bits (114), Expect = 8e-05
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+Q+S + G +++D L + + + L V+ P V HG D D+ L RDFG+ +
Sbjct: 45 CLLQLS-NRAGTWLVDPLRLSD-LSPLRVLLARPGLRTVLHGGDYDIRSLHRDFGIVVQQ 102
Query: 194 LFDTYHAAKSLGLPALSLKFL 256
+FDT AA+ G L L
Sbjct: 103 MFDTMVAAQFTGATEFGLAAL 123
Score = 37.1 bits (82), Expect = 0.59
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLL 372
L ++ G++ DK ++ ADW RPL + YA DT +LL
Sbjct: 124 LREHFGIELDKRFQKADWSKRPLTTEMADYAAHDTAHLL 162
Score = 36.3 bits (80), Expect = 1.0
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +3
Query: 513 PLYIRSKK--NFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQG 686
PL++ K + +A L+ L ++RD QAR+ D ++P LL ++E +P ++
Sbjct: 200 PLFLNCKGAGKLKPRNLAILEALLQFRDQQAREADRPAFKVIPAEALLKIAELVPAAVRD 259
Query: 687 VNACCDPMPPFV---KQNVITIHRMILSFA 767
+N P + + ++T+ R L+ A
Sbjct: 260 MNGIAGLTPRLLGRYGEQLLTVVRQGLAVA 289
>UniRef50_Q2LWK2 Cluster: Ribonuclease D; n=1; Syntrophus
aciditrophicus SB|Rep: Ribonuclease D - Syntrophus
aciditrophicus (strain SB)
Length = 339
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+Q+ + ++ D + + L F DP+ LKV H D+D+ L+RD+G
Sbjct: 95 CLVQVRASKR-TYVFDPFNGID-LQFLRPYFADPRLLKVTHAGDNDIRILKRDYGFEFRN 152
Query: 194 LFDTYHAAKSLGLPALSL 247
+FDT+ AA LG L+L
Sbjct: 153 IFDTHRAAHMLGSQYLAL 170
Score = 39.1 bits (87), Expect = 0.15
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Frame = +1
Query: 175 RRVFGGSFRHI---PRSQVTRSARAFAQISLMK-YCGVDTDKTYRL--ADWRIRPLPDVL 336
+R +G FR+I R+ ++ A S+++ Y GV+ +KT ++ + W RPL +
Sbjct: 143 KRDYGFEFRNIFDTHRAAHMLGSQYLALSSIIEQYLGVEIEKTKKMQRSKWEARPLSEGQ 202
Query: 337 IKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFED 453
++YA DT YL ++R + ++ K G VFE+
Sbjct: 203 LRYAVQDTAYLADLYRHLNEKLSLK--GMQERARKVFEN 239
Score = 37.1 bits (82), Expect = 0.59
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 564 LKMLYKWRDSQARQLDESTTYLLPNHMLLSLSE 662
LK LY+WR +ARQ + + +LP+ LLSLSE
Sbjct: 272 LKKLYRWRFHKARQTNRAMFLILPDSALLSLSE 304
>UniRef50_Q09BY7 Cluster: 3'-5' exonuclease, putative; n=2;
Cystobacterineae|Rep: 3'-5' exonuclease, putative -
Stigmatella aurantiaca DW4/3-1
Length = 379
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
C +Q++T F+ D LA L + DP++ K FH A D+ +L + G+ + G
Sbjct: 37 CFLQVATPTD-IFLFDTLAPGVDASLLAPLMADPERTKYFHAAQGDLQFL-AEAGIRVRG 94
Query: 194 LFDTYHAAKSLGLPALSL 247
LFDT+ AA LG P + L
Sbjct: 95 LFDTHRAATLLGWPKVGL 112
>UniRef50_Q4XW48 Cluster: 3'-5' exonuclease, putative; n=2;
Plasmodium chabaudi|Rep: 3'-5' exonuclease, putative -
Plasmodium chabaudi
Length = 730
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/72 (36%), Positives = 42/72 (58%)
Frame = +2
Query: 17 LIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGL 196
LI I T + D+IID + E I+ LN+ TDPK LK+ + +++ +L+ Q+DF +Y +
Sbjct: 501 LILIGTKDV-DYIIDVFNMFEDIYLLNIT-TDPKILKITYNSENLILFFQKDFSIYFINT 558
Query: 197 FDTYHAAKSLGL 232
D A L +
Sbjct: 559 IDLLLCANCLNI 570
>UniRef50_Q8DFS1 Cluster: Ribonuclease D; n=34; Vibrionales|Rep:
Ribonuclease D - Vibrio vulnificus
Length = 390
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLS 441
+Y V+ DK+ DW RPL D ++YA D HYLL ++ ++ +++E Q S
Sbjct: 143 QYLNVELDKSESRTDWLARPLSDKQLEYAAADVHYLLPLYEILLEKVMEAGWWQAAQQES 202
Query: 442 VFEDSRQ 462
+ S++
Sbjct: 203 ELQASKR 209
>UniRef50_Q7VLG8 Cluster: Ribonuclease D; n=2; Pasteurellaceae|Rep:
Ribonuclease D - Haemophilus ducreyi
Length = 373
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQ-TNMLLS 441
Y ++ DK DW RPL + ++YA D +YLL +++ ++ ++ + N + N
Sbjct: 129 YLNIELDKGASRTDWLARPLTETQLQYAAADVYYLLPIYQKLQAELAQTNWQEAVNQECQ 188
Query: 442 VFEDSRQTCASTYNKEVIHDESPYHYTYVRRRISI---ISKWRL 564
+ + R T + E Y +T R++++I ++KWR+
Sbjct: 189 LLVNKRN---KTLELNDAYKEISYAWTLTRQQLAILKLLAKWRI 229
Score = 36.7 bits (81), Expect = 0.79
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 549 QQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPR 674
QQ+A LK+L KWR +AR+ D + +++ L+ ++++ P+
Sbjct: 216 QQLAILKLLAKWRIEEARKRDLALNFVIKEQSLIEIAKSQPK 257
>UniRef50_A7JL92 Cluster: Ribonuclease D; n=11; Francisella
tularensis|Rep: Ribonuclease D - Francisella tularensis
subsp. novicida GA99-3548
Length = 364
Score = 46.4 bits (105), Expect = 0.001
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+Q++T E F+ID L E KL +F D +K+ H A +D+ ++R F +
Sbjct: 39 CLVQLAT-ENEIFLIDTLKDLE-FKKLKEIFEDKDIIKIIHSATNDIPIIKRFFNCEVNN 96
Query: 194 LFDTYHAAKSLGLPALS 244
+FDT AA LG S
Sbjct: 97 IFDTQLAATFLGFQTQS 113
Score = 33.9 bits (74), Expect = 5.5
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQI 402
L + ++ +K + +DWR RPL + YA D YL+ + ++ Q+
Sbjct: 119 LKEILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQL 167
>UniRef50_A6G563 Cluster: Ribonuclease D, putative; n=1;
Plesiocystis pacifica SIR-1|Rep: Ribonuclease D,
putative - Plesiocystis pacifica SIR-1
Length = 386
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVR--------EHIHKLNVVFTDPKKLKVFHGADSDVLWLQR 169
CL+Q++ G F++D LA+ E + L P HG + DV L+R
Sbjct: 46 CLLQLNV-AGALFLVDTLALAGDSGEPRAEALAALAEPLASPSLRLWIHGGEYDVACLKR 104
Query: 170 DFGVYLVGLFDTYHAAKSLG 229
DFG+ L GLFDT AA LG
Sbjct: 105 DFGIALGGLFDTQQAASFLG 124
Score = 36.7 bits (81), Expect = 0.79
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 522 IRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRE 677
++ ++ +++ L +Y+WR+ + R+LD L+ N L+ L+ PR+
Sbjct: 216 LKGARDLPAERLPVLAAIYRWREDKGRELDHPPGRLIANEPLVHLARRAPRD 267
>UniRef50_Q7NEY0 Cluster: Glr3747 protein; n=1; Gloeobacter
violaceus|Rep: Glr3747 protein - Gloeobacter violaceus
Length = 195
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +1
Query: 199 RHIPRSQVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYV 378
R IP S+ R + + G++ DK Y+ ++W +RPL + YA +D ++
Sbjct: 116 RSIPTSRRGALERNSLKALSAHFLGIELDKRYQASNWALRPLTAEQLDYAALDPWVTFHI 175
Query: 379 WRVMKNQIIEKNAGQTNMLL 438
W M+ + +N G +L+
Sbjct: 176 WEHMRALVEPENEGFEGLLV 195
>UniRef50_Q4ULB3 Cluster: Ribonuclease D; n=9; Rickettsia|Rep:
Ribonuclease D - Rickettsia felis (Rickettsia azadi)
Length = 281
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKN 414
K G+ DKT++ ++W RP+ ++ YA +D YL +++ + N II N
Sbjct: 122 KLIGITIDKTHQKSNWLKRPITSDMLNYAMLDVEYLYKIYKELNNIIIRNN 172
>UniRef50_A4E7K3 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 377
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIE 408
+CGV KT L DW RPL D I+YA D YL+ + M +++ E
Sbjct: 122 FCGVSLPKTESLTDWSRRPLTDKQIEYAIDDVKYLIVAYTEMMSRLRE 169
Score = 34.7 bits (76), Expect = 3.2
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+QI+T +D L + + + L + D KVFH D+ + GV
Sbjct: 39 CLVQIATP-AESVAVDPLVI-DDLSPLAELMADESVTKVFHACSQDMEVMLHTVGVLPRP 96
Query: 194 LFDTYHAAKSLG 229
+FDT AA LG
Sbjct: 97 IFDTQVAAAFLG 108
>UniRef50_Q31F99 Cluster: Ribonuclease D; n=1; Thiomicrospira
crunogena XCL-2|Rep: Ribonuclease D - Thiomicrospira
crunogena (strain XCL-2)
Length = 385
Score = 41.5 bits (93), Expect = 0.028
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 8 ITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYL 187
I LIQI T +G IID LA+ E + L + ++P KVFH A D+ L + G
Sbjct: 40 ILSLIQIQTHDGQAAIIDPLAI-EDLTALWSIISNPNVRKVFHSARQDIEVLYQVSGQMP 98
Query: 188 VGLFDT 205
+ ++DT
Sbjct: 99 ISIYDT 104
>UniRef50_A6DHN3 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 372
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 247 QISLMKYC----GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIE 408
Q+SL K C ++ KT +++DW RPL D + YA D YL+ + ++ ++ E
Sbjct: 114 QVSLAKLCLEMMDIEISKTQQVSDWTKRPLKDSQLNYAAEDVRYLIEITETLREKLKE 171
>UniRef50_UPI0000E49420 Cluster: PREDICTED: similar to G
protein-coupled receptor; n=12; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to G protein-coupled
receptor - Strongylocentrotus purpuratus
Length = 976
Score = 40.7 bits (91), Expect = 0.048
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIH---KLNVVFTDPKKLKVFHGADSDVLWLQRD 172
+G L+QIST +G F+ DA + + L LKV H +SD L D
Sbjct: 748 KGRLTLVQISTWDGKAFLFDAFKNPQLLKGNSSLKKTLEHDSILKVIHACNSDTYSLYHD 807
Query: 173 FGVYLVGLFDT 205
FGV L +FDT
Sbjct: 808 FGVKLKNVFDT 818
>UniRef50_Q97HU8 Cluster: Ribonuclease D; n=1; Clostridium
acetobutylicum|Rep: Ribonuclease D - Clostridium
acetobutylicum
Length = 205
Score = 40.7 bits (91), Expect = 0.048
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKN 414
L KY ++ DK + ++W L I+YA D YL +WR +K ++I+ N
Sbjct: 124 LRKYLNINIDKKLQKSNWSAENLTKEQIQYATYDVIYLEKLWRALKAELIKAN 176
>UniRef50_Q6G329 Cluster: Ribonuclease D; n=3; Bartonella|Rep:
Ribonuclease D - Bartonella henselae (Rochalimaea
henselae)
Length = 406
Score = 40.3 bits (90), Expect = 0.064
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 271 GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKN 414
G DK+ R DW RPL + + YA D YL V+ ++K Q +EKN
Sbjct: 149 GYQLDKSSRFTDWSFRPLSEKQLLYALADVTYLRDVYLLLKKQ-LEKN 195
>UniRef50_A1B5A2 Cluster: 3'-5' exonuclease; n=3;
Rhodobacteraceae|Rep: 3'-5' exonuclease - Paracoccus
denitrificans (strain Pd 1222)
Length = 204
Score = 39.9 bits (89), Expect = 0.084
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+Q+S+ +G ++ + L + DPK LK+FH D+ L+ FGV
Sbjct: 37 CLVQLSSGDGNAHLVQIAKGQREAPNLARMLADPKVLKLFHFGRFDIAALEAAFGVVTKP 96
Query: 194 LFDTYHAAK 220
++ T A+K
Sbjct: 97 VWCTKIASK 105
>UniRef50_P44442 Cluster: Ribonuclease D; n=18; Pasteurellaceae|Rep:
Ribonuclease D - Haemophilus influenzae
Length = 399
Score = 39.9 bits (89), Expect = 0.084
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLS 441
+Y V+ DK +W RPL D+ ++YA D YLL ++ I+EK +T +
Sbjct: 151 QYLNVEIDKGATRTNWIKRPLSDIQLQYAAGDVWYLLPLY-----HILEKELAKTPWEQA 205
Query: 442 VFEDSRQTCASTYNKEVIHDESPY 513
V +D A T+ + E Y
Sbjct: 206 VRDDCELVLAKTHKLQERDSEKAY 229
>UniRef50_A0Z9G7 Cluster: Ribonuclease D; n=1; marine gamma
proteobacterium HTCC2080|Rep: Ribonuclease D - marine
gamma proteobacterium HTCC2080
Length = 380
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +3
Query: 501 REPIPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPREL 680
R P+ + +S ++QQ+A L L WR+S+AR + ++L + ++L L++ +P +
Sbjct: 197 RGPLAKF-KSAWKLNSQQLAVLLDLIDWRESKARDRNRPRNWILHDKVILDLAKRIPTSM 255
Query: 681 QGVNACCDPMP 713
+ A D MP
Sbjct: 256 PQL-AAADSMP 265
Score = 34.3 bits (75), Expect = 4.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 274 VDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMK 393
+D K +DW +RPL D YA D +L W +++
Sbjct: 134 IDVAKDETQSDWLVRPLTDAQCHYAMQDVTFLAQCWPILE 173
>UniRef50_UPI0000E46DB2 Cluster: PREDICTED: similar to RE33408p;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to RE33408p - Strongylocentrotus purpuratus
Length = 579
Score = 39.1 bits (87), Expect = 0.15
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIH---KLNVVFTDPKKLKVFHGADSDVLWLQRDF 175
G L+QIST +G F+ DA + + L + LKV H SD L F
Sbjct: 406 GCLTLVQISTWDGKAFLFDAFKNPQLLKGNSSLKKILEHNSILKVIHDCKSDAYSLYHGF 465
Query: 176 GVYLVGLFDTYHAAKSL 226
GV L +FDT A +++
Sbjct: 466 GVKLKNVFDTSIAMRTI 482
>UniRef50_Q6FA19 Cluster: Ribonuclease D, processes tRNA; n=2;
Acinetobacter|Rep: Ribonuclease D, processes tRNA -
Acinetobacter sp. (strain ADP1)
Length = 398
Score = 39.1 bits (87), Expect = 0.15
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 247 QISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
Q +L ++ +K +DW RPL D +KYA D YLL + +K+Q+ EK
Sbjct: 135 QAALKLVLDIEIEKDQTRSDWLARPLSDEQLKYAANDVLYLLKLSDQIKHQLQEK 189
>UniRef50_Q5FT94 Cluster: Ribonuclease D; n=3; Acetobacteraceae|Rep:
Ribonuclease D - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 396
Score = 39.1 bits (87), Expect = 0.15
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 271 GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKN 414
G DK +R +DW RPL I YA D +L V+ ++ Q+ E++
Sbjct: 136 GRSIDKAHRFSDWSARPLSKAQIAYAATDVTHLRTVYDALRKQLAEQD 183
>UniRef50_Q2BKH7 Cluster: Ribonuclease D; n=1; Neptuniibacter
caesariensis|Rep: Ribonuclease D - Neptuniibacter
caesariensis
Length = 397
Score = 39.1 bits (87), Expect = 0.15
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 17 LIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGL 196
LIQ++ D+ ++ID L + + L+ +F D +KV H A D+ ++ G V L
Sbjct: 59 LIQVADDQAC-YLIDPLEISD-FSSLSTLFKDEGVVKVMHAATEDLELFHKEIGALPVPL 116
Query: 197 FDTYHAA 217
FDT AA
Sbjct: 117 FDTQIAA 123
>UniRef50_UPI0000587482 Cluster: PREDICTED: hypothetical protein;
n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 943
Score = 38.7 bits (86), Expect = 0.19
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 199 RHIPRSQVTRSARAFAQISLMKYC-GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLY 375
+ IPR +R + L+ YC G DK R++DW RPL + YA +D LL
Sbjct: 495 KEIPRPGNSRIG-SHGLTDLVHYCFGKYLDKRDRISDWERRPLRQAQMIYAALDAFCLLE 553
Query: 376 VWRVMKNQI 402
V+ +K ++
Sbjct: 554 VYAYLKEKV 562
>UniRef50_A6C450 Cluster: Ribonuclease D; n=1; Planctomyces maris
DSM 8797|Rep: Ribonuclease D - Planctomyces maris DSM
8797
Length = 395
Score = 38.7 bits (86), Expect = 0.19
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 304 DWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIE 408
DWR RPL IKYA D ++L +W++ + ++I+
Sbjct: 138 DWRRRPLTQQQIKYALDDVKFVLKIWKIQEKELID 172
>UniRef50_A5WG76 Cluster: 3'-5' exonuclease; n=3; Psychrobacter|Rep:
3'-5' exonuclease - Psychrobacter sp. PRwf-1
Length = 431
Score = 38.7 bits (86), Expect = 0.19
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = +1
Query: 205 IPRSQVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWR 384
I S +T + Q +L + V +K +DW RPL YA D YLL ++
Sbjct: 148 IALSYLTGQLQMGYQQALSQELDVHVEKAESQSDWLARPLSHEQENYAIDDVRYLLNLYD 207
Query: 385 VMKNQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDESPY----HYTYVRRRISI-- 546
+++ Q+ ++ G T+ V ED + Y I D++ Y + Y ++++
Sbjct: 208 ILQQQLSKQ--GLTD---KVVEDCQLYAKELYESANIEDDATYLAMADFRYTPEQLAVLQ 262
Query: 547 -ISKWR 561
+S WR
Sbjct: 263 AVSSWR 268
>UniRef50_Q9C7K6 Cluster: 3'-5' exonuclease, putative; n=2; core
eudicotyledons|Rep: 3'-5' exonuclease, putative -
Arabidopsis thaliana (Mouse-ear cress)
Length = 582
Score = 38.7 bits (86), Expect = 0.19
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQT 426
K GV +KT R +DW RPL ++YA +D L++++R +++ ++ +T
Sbjct: 504 KILGVSLNKTRRNSDWEQRPLSQNQLEYAALDAAVLIHIFRHVRDHPPHDSSSET 558
>UniRef50_UPI0001555E55 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 692
Score = 38.3 bits (85), Expect = 0.26
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 208 PRSQVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRV 387
P ++ + A + + + G DK +L+DW RPL I YA D + LL V+R
Sbjct: 484 PEARGAKRAEKGLSLLVQRVLGKPLDKAEQLSDWERRPLRPAQILYAASDAYCLLEVYRA 543
Query: 388 M 390
+
Sbjct: 544 L 544
>UniRef50_Q0D6Q9 Cluster: Os07g0452400 protein; n=5; Oryza
sativa|Rep: Os07g0452400 protein - Oryza sativa subsp.
japonica (Rice)
Length = 501
Score = 38.3 bits (85), Expect = 0.26
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 202 HIPRSQVTRSARAFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVW 381
H + ++ R ++ A I + GV K + +DW RPL + I+YA D +YLL ++
Sbjct: 170 HDMQKRLPRETKSLATIC-EELLGVYLSKELQCSDWSYRPLSEGQIQYAASDAYYLLDIF 228
Query: 382 RVMKNQI-IEKNAGQTNMLLS 441
+ +I E TN L S
Sbjct: 229 DLFHQKIRTEGKCLPTNELTS 249
>UniRef50_Q8F260 Cluster: Ribonuclease D; n=4; Leptospira|Rep:
Ribonuclease D - Leptospira interrogans
Length = 212
Score = 37.9 bits (84), Expect = 0.34
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
C++QI ++ L ++ L +F +P+ +K+FH A D L+L+ G+ L
Sbjct: 48 CVVQICDSSNNVSLVQILPDQKEAPLLKSLFENPEIVKIFHFARMDSLFLRYRLGINLQN 107
Query: 194 LFDTYHAAK 220
+F T A+K
Sbjct: 108 VFCTKIASK 116
>UniRef50_Q6SGG6 Cluster: Ribonuclease D, putative; n=3;
environmental samples|Rep: Ribonuclease D, putative -
uncultured bacterium 560
Length = 358
Score = 37.9 bits (84), Expect = 0.34
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 283 DKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQI 402
DK+Y DW RPLP +++YA D YLL + +K+++
Sbjct: 140 DKSYTRFDWTTRPLPANVVEYALDDVRYLLPNFEKLKHEL 179
>UniRef50_Q11JA8 Cluster: Ribonuclease D; n=40;
Alphaproteobacteria|Rep: Ribonuclease D - Mesorhizobium
sp. (strain BNC1)
Length = 392
Score = 37.9 bits (84), Expect = 0.34
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQI 402
+++ G DKT R DWR RPL + ++YA D +L+ V+ + ++
Sbjct: 121 VLRITGEHIDKTSRFTDWRHRPLSEKQLRYALADVTHLIPVYAHLTTEL 169
>UniRef50_A0YC02 Cluster: Ribonuclease D; n=1; marine gamma
proteobacterium HTCC2143|Rep: Ribonuclease D - marine
gamma proteobacterium HTCC2143
Length = 384
Score = 37.9 bits (84), Expect = 0.34
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 8 ITCLIQISTDEG-GDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
I L+QIS EG G F+ID L++ + L + TDP +KV H D+ +R F V
Sbjct: 50 IGALLQIS--EGTGCFLIDPLSI-DDFSPLTALLTDPAIVKVLHSCSEDLEVFERLFQVL 106
Query: 185 LVGLFDTYHAA 217
L DT AA
Sbjct: 107 PQPLIDTQIAA 117
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 489 GDSRREPIPLYIRSKKN---FDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLS 659
G S + I Y + K+ ++Q+ L+++ +WR+S+AR D +L + ++
Sbjct: 199 GQSDTDAITQYYKKVKSVWKLSSRQLGVLRLVVEWRESEARHRDRPRGRILKDKSCFEIA 258
Query: 660 ENLPRELQGVNACCD 704
PR+++ +++ D
Sbjct: 259 RTQPRDVKALSSIED 273
>UniRef50_A2DER9 Cluster: 3'-5' exonuclease family protein; n=1;
Trichomonas vaginalis G3|Rep: 3'-5' exonuclease family
protein - Trichomonas vaginalis G3
Length = 645
Score = 37.9 bits (84), Expect = 0.34
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +1
Query: 298 LADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAST 477
+ DWRIRPL ++ AR HYLLY++ ++ ++ E++ + +++ ++
Sbjct: 296 MQDWRIRPLSLSQMRLARQRVHYLLYLYDSLRLKLTEESTKLLDKTIAISHHKASMDWTS 355
Query: 478 YNKEVI 495
Y +I
Sbjct: 356 YRTMII 361
>UniRef50_A4ALP3 Cluster: Ribonuclease; n=3; Actinobacteria
(class)|Rep: Ribonuclease - marine actinobacterium
PHSC20C1
Length = 418
Score = 37.5 bits (83), Expect = 0.45
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +2
Query: 17 LIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGL 196
LIQI G F+ D A+ + +LN V + + + H A D+ L R+ G+Y L
Sbjct: 65 LIQIFRRGAGTFLFDPPAIGD-FSELNDVIANEEW--ILHAATQDLTCL-REVGLYPTRL 120
Query: 197 FDTYHAAKSLGLPALSL 247
FDT A+ GLP + L
Sbjct: 121 FDTELGARIAGLPRVGL 137
Score = 33.1 bits (72), Expect = 9.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLL 372
+ G+ K + ADW RPLP + YA +D L+
Sbjct: 144 FLGIHLAKEHSSADWSTRPLPQAWLVYAALDVELLV 179
>UniRef50_A4BJR0 Cluster: Ribonuclease D; n=1; Reinekea sp.
MED297|Rep: Ribonuclease D - Reinekea sp. MED297
Length = 380
Score = 37.1 bits (82), Expect = 0.59
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +2
Query: 17 LIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGL 196
LIQ+ ++ ++ID L + + + V+ +DP +KV H D L GV L +
Sbjct: 45 LIQVGIEDQV-WLIDPLQINDWAPLVRVL-SDPAIVKVLHALSEDAEVLAHHLGVELQNV 102
Query: 197 FDTYHAAKSLGLP 235
FDT AA LG P
Sbjct: 103 FDTQIAAGFLGHP 115
>UniRef50_UPI0000E0E878 Cluster: ribonuclease D; n=1; alpha
proteobacterium HTCC2255|Rep: ribonuclease D - alpha
proteobacterium HTCC2255
Length = 382
Score = 36.3 bits (80), Expect = 1.0
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 17 LIQISTDEGGDF-IIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
L+QI +G D +ID +A+ + + L+ + T+P+ +KV H D+ + GV
Sbjct: 45 LVQIY--DGVDIALIDPIAI-DDLSPLSQLMTNPQVIKVLHACSEDLETFEFALGVMPEP 101
Query: 194 LFDTYHAAKSLGL 232
LFDT AA+ GL
Sbjct: 102 LFDTQVAAQLAGL 114
>UniRef50_UPI0000510196 Cluster: COG0349: Ribonuclease D; n=1;
Brevibacterium linens BL2|Rep: COG0349: Ribonuclease D -
Brevibacterium linens BL2
Length = 391
Score = 36.3 bits (80), Expect = 1.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 271 GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIE 408
GV K + ADW RPLP + YA +D LL + ++ +IE
Sbjct: 138 GVRLAKEHSAADWSKRPLPKEWLNYAALDVEVLLPIRDILHEALIE 183
>UniRef50_Q28RA7 Cluster: Ribonuclease D; n=19;
Alphaproteobacteria|Rep: Ribonuclease D - Jannaschia sp.
(strain CCS1)
Length = 386
Score = 36.3 bits (80), Expect = 1.0
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 14 CLIQIS---TDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
CL+Q++ TD+ +ID LA + L +F + +KVFH A D+ + G+
Sbjct: 41 CLVQVAMPGTDDTDAVLIDPLAEGLSLEPLYELFRNVNVVKVFHAARQDLEIFFVEGGLV 100
Query: 185 LVGLFDTYHAAKSLG 229
LFDT AA G
Sbjct: 101 PTPLFDTQVAAMVCG 115
>UniRef50_Q1QXJ4 Cluster: Ribonuclease D; n=1; Chromohalobacter
salexigens DSM 3043|Rep: Ribonuclease D -
Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB13768)
Length = 375
Score = 36.3 bits (80), Expect = 1.0
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 301 ADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCASTY 480
+DW RPL D ++YA +D YL +W ++ ++ + L + E+ + C +
Sbjct: 142 SDWLQRPLSDAQLQYAALDVVYLPRIWEAQRDALMRE-----GRLAWLEEECARLCDAN- 195
Query: 481 NKEVIHDESPY--HYTYVRRRISIISKWRLLRCSTNGETRRR 600
++V DE Y H R ++ ++ L GE RRR
Sbjct: 196 RRDVNADEHWYRRHRQLWRLEPRQLALYQSLTRWREGEVRRR 237
>UniRef50_A4GIY0 Cluster: Putative ribonuclease D; n=1; uncultured
Nitrospinaceae bacterium|Rep: Putative ribonuclease D -
uncultured Nitrospinaceae bacterium
Length = 386
Score = 36.3 bits (80), Expect = 1.0
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 11 TCLIQISTDEGGDFI--IDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
T LIQ+ GG+ ID +A+ + L ++ DP K+KVFH A D+ L R G
Sbjct: 38 TGLIQVG---GGEHFAAIDPIALPDMTPLLELL-KDPTKVKVFHAARQDLEILVRFCGQV 93
Query: 185 LVGLFDTYHAAKSLG 229
+ +FDT AA +G
Sbjct: 94 IPPIFDTQIAAALVG 108
Score = 33.5 bits (73), Expect = 7.3
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 238 AFAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
+FA+I + K G K+ DW RPL D I+YA D YL+ V+ N++IE+
Sbjct: 114 SFAKI-VYKALGKKIHKSETYTDWCRRPLSDSQIEYAIDDVRYLMPVY----NKLIER 166
>UniRef50_A0ZIG3 Cluster: Putative uncharacterized protein; n=1;
Nodularia spumigena CCY 9414|Rep: Putative
uncharacterized protein - Nodularia spumigena CCY 9414
Length = 871
Score = 36.3 bits (80), Expect = 1.0
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 256 LMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWR 384
L + VD D+ +DW RPL D +KYA MDT YL V R
Sbjct: 132 LCHFVNVDADEGS--SDWGKRPLSDKQVKYAAMDTVYLAAVHR 172
>UniRef50_Q241P7 Cluster: 3'-5' exonuclease family protein; n=1;
Tetrahymena thermophila SB210|Rep: 3'-5' exonuclease
family protein - Tetrahymena thermophila SB210
Length = 645
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +1
Query: 256 LMKYCGVDTDKTYR----LADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
L KYC +K + L++W RPL + + YA +D+H+L+ + + +++I++
Sbjct: 91 LQKYCDYTLEKKEKKQLQLSEWSDRPLSEEQLNYAALDSHFLIKIRYELLHEMIKR 146
>UniRef50_Q9I450 Cluster: Ribonuclease D; n=21;
Pseudomonadaceae|Rep: Ribonuclease D - Pseudomonas
aeruginosa
Length = 374
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 549 QQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQ 728
QQ+A L+ L WR+ QAR + ++L L L+ LP+ + A D P V+Q
Sbjct: 214 QQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQ 273
Query: 729 N 731
+
Sbjct: 274 D 274
>UniRef50_Q6N5D4 Cluster: Ribonuclease D; n=11; Rhizobiales|Rep:
Ribonuclease D - Rhodopseudomonas palustris
Length = 392
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +2
Query: 8 ITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYL 187
+ C++Q+++ E +IDALA + + + + LKVFH A D+ + G+
Sbjct: 38 LLCVVQMASAEEA-LVIDALADGIDLKPFFDLMANEQVLKVFHAARQDIEIVWHRAGIVP 96
Query: 188 VGLFDTYHAAKSLG 229
+FDT AA LG
Sbjct: 97 HPIFDTQVAAMVLG 110
>UniRef50_Q5PBN9 Cluster: Ribonuclease D; n=2; Anaplasma|Rep:
Ribonuclease D - Anaplasma marginale (strain St. Maries)
Length = 401
Score = 35.9 bits (79), Expect = 1.4
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+Q++ +GG ++D L R + L +F D KVFH D+ L + F
Sbjct: 46 CLLQMAY-QGGQCVVDVLDERLDLSPLQEIFDDEGIYKVFHDCRQDLDALSQRFTRLPRP 104
Query: 194 LFDTYHAA 217
+FDT A+
Sbjct: 105 IFDTQTAS 112
>UniRef50_Q179T2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 35.9 bits (79), Expect = 1.4
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 253 SLMKYC-GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTN 429
+L++ C G DK+ + ++W RPL ++YA +D LL ++ ++ Q+
Sbjct: 578 NLVRLCLGKKLDKSNQFSNWAQRPLRKEQLRYAALDAFCLLEIYDAIEKQLTHIQLDPNE 637
Query: 430 MLLSVFEDSR 459
+L ++ D R
Sbjct: 638 ILNALLNDVR 647
>UniRef50_A7APW4 Cluster: 3'-5' exonuclease domain containing
protein; n=1; Babesia bovis|Rep: 3'-5' exonuclease
domain containing protein - Babesia bovis
Length = 230
Score = 35.9 bits (79), Expect = 1.4
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 101 VFTDPKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLK 250
+ +DP LK+ HGA SD+ + R FGV D + L L SLK
Sbjct: 112 ILSDPDILKISHGAPSDMRLMYRHFGVRSRSFVDLQSVCEELQLRPCSLK 161
>UniRef50_A2EMW6 Cluster: HRDC domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: HRDC domain containing
protein - Trichomonas vaginalis G3
Length = 443
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 564 LKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDP-MPPFVKQNVIT 740
LK L WRDS A DES + + ++ + +++NLP + +C +PP V
Sbjct: 362 LKELISWRDSVAAIEDESPNFFVTDNQIWKIAKNLPTTQDELISCFGTVIPPLVSTYRGD 421
Query: 741 IHRMILS 761
I +MI++
Sbjct: 422 ILQMIVA 428
>UniRef50_A0DUC4 Cluster: Chromosome undetermined scaffold_64, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_64,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 529
Score = 35.9 bits (79), Expect = 1.4
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 262 KYCGVDTD----KTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
KYCGV + K + +DW RPL + + YA +D YL+ + ++ Q E+
Sbjct: 107 KYCGVQFEREDKKRLQKSDWFARPLTEEQLFYAALDCKYLVVLREILLQQYTEE 160
>UniRef50_Q0BZZ0 Cluster: Ribonuclease D; n=1; Hyphomonas neptunium
ATCC 15444|Rep: Ribonuclease D - Hyphomonas neptunium
(strain ATCC 15444)
Length = 388
Score = 35.5 bits (78), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CLIQ S G + +ID A I + ++LKVFH A D+ R G
Sbjct: 45 CLIQASAP-GVEGLIDPRAEDLDIRPFLDLIASDRQLKVFHAARQDIEIFNRLIGHPPGP 103
Query: 194 LFDTYHAAKSLG 229
+FDT AA +LG
Sbjct: 104 IFDTQVAAMALG 115
>UniRef50_A6VYC1 Cluster: Ribonuclease D; n=2; Marinomonas|Rep:
Ribonuclease D - Marinomonas sp. MWYL1
Length = 384
Score = 35.5 bits (78), Expect = 1.8
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +2
Query: 8 ITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYL 187
IT LIQIS + +ID L++ E L + DP +KVFH D+ R GV
Sbjct: 52 ITGLIQISEGDKA-VLIDPLSIDEW-EPLRNLMVDPSVMKVFHACSEDLDVFDRLLGVLP 109
Query: 188 VGLFDT 205
+DT
Sbjct: 110 TPFYDT 115
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 555 MAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVN 692
+ L++L+ WRD QAR+ D +L + L SL++ LP + V+
Sbjct: 226 LTLLRLLFIWRDGQARKEDVPKGQILKDRTLWSLAKTLPTHHKAVS 271
>UniRef50_A4A872 Cluster: Ribonuclease D; n=1; Congregibacter
litoralis KT71|Rep: Ribonuclease D - Congregibacter
litoralis KT71
Length = 370
Score = 35.5 bits (78), Expect = 1.8
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 271 GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQ 423
GV+ DK +DW RPL + YA +D L+ WR+++ E+ Q
Sbjct: 127 GVELDKGETRSDWLKRPLSESQCHYAALDVLELVPAWRILRELAEEQGRMQ 177
>UniRef50_Q6NGV4 Cluster: Putative ribonuclease; n=1;
Corynebacterium diphtheriae|Rep: Putative ribonuclease -
Corynebacterium diphtheriae
Length = 407
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +3
Query: 549 QQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQ 683
+Q+ + L++ RD +AR + S + LLP+ +L+S+++ PR Q
Sbjct: 223 RQLVVAEALWELRDDEARMKNTSVSRLLPDKVLISVAQRPPRNSQ 267
>UniRef50_Q5QWP5 Cluster: Ribonuclease D; n=2; Idiomarina|Rep:
Ribonuclease D - Idiomarina loihiensis
Length = 390
Score = 35.1 bits (77), Expect = 2.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 241 FAQISLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
+A++ + GV+ DK+ +W RPL D + YA D YL ++ +K EK
Sbjct: 130 YARLVDALFDGVELDKSLSRTNWLKRPLSDEQLDYAAADASYLAIMYPYLKALCEEK 186
Score = 33.9 bits (74), Expect = 5.5
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 549 QQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPR 674
+Q+AALK+L WR +AR+ D ++ + +LL L+ +P+
Sbjct: 225 RQLAALKILTPWRLHKARERDIPLGFIAKDGVLLELARRMPK 266
>UniRef50_Q1GSA7 Cluster: Ribonuclease D; n=8; Sphingomonadales|Rep:
Ribonuclease D - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 395
Score = 35.1 bits (77), Expect = 2.4
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSV 444
+ G+ DK R DW RPL I YA D +L ++ +M +++I G
Sbjct: 128 WLGLQLDKGARFTDWSRRPLDKRQIDYAIGDVTHLAKIFPMMLDKLIRTGRGHW------ 181
Query: 445 FEDSRQTCASTYNKEVIHDESPYHYTYVRRRISIISKWRLLRCSTNGETRRR 600
++ + A N V D++ R+ ++ + R L E R +
Sbjct: 182 LDEEMEKLADPANYSVDPDKAWQRIKIPSRKPDVLGRLRALAAWREREARNK 233
>UniRef50_A1WCM5 Cluster: Putative uncharacterized protein
precursor; n=3; Comamonadaceae|Rep: Putative
uncharacterized protein precursor - Acidovorax sp.
(strain JS42)
Length = 223
Score = 35.1 bits (77), Expect = 2.4
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 507 PIPLYIRSKKNFDNQQ--MAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPREL 680
P L + +NFD Q +A+++ + +W+ + Q+DE TY++ L S+ LPR L
Sbjct: 138 PSGLGVSLGQNFDTLQDALASMQRIARWKIADEGQVDEGVTYVMNFQFRLDTSQ-LPRPL 196
Query: 681 Q 683
Q
Sbjct: 197 Q 197
>UniRef50_Q8G5Q6 Cluster: Putative uncharacterized protein; n=4;
Bifidobacterium|Rep: Putative uncharacterized protein -
Bifidobacterium longum
Length = 433
Score = 34.7 bits (76), Expect = 3.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQ 423
Y G+ K + ADW RPLP YA +D L+ + +M+ + K AG+
Sbjct: 144 YLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDL--KAAGK 194
>UniRef50_P09155 Cluster: Ribonuclease D; n=44;
Enterobacteriaceae|Rep: Ribonuclease D - Escherichia
coli (strain K12)
Length = 375
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLL 372
+Y GV DK+ DW RPL + +YA D YLL
Sbjct: 124 EYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLL 160
>UniRef50_Q55641 Cluster: Ribonuclease D; n=29; Cyanobacteria|Rep:
Ribonuclease D - Synechocystis sp. (strain PCC 6803)
Length = 217
Score = 34.3 bits (75), Expect = 4.2
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CL+QI EG + +E L + DP K+FH A D L+ F +
Sbjct: 48 CLVQICDPEGNVTALRIAKGQEEAPNLTRLMEDPGITKIFHFARFDTAQLKHTFDIKTYP 107
Query: 194 LFDTYHAAK 220
+F T A+K
Sbjct: 108 IFCTKIASK 116
>UniRef50_Q4FNB9 Cluster: Ribonuclease D; n=2; Candidatus
Pelagibacter ubique|Rep: Ribonuclease D - Pelagibacter
ubique
Length = 203
Score = 34.3 bits (75), Expect = 4.2
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +2
Query: 14 CLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVG 193
CLIQIST II + LN V +D +K+FH +D+ ++
Sbjct: 39 CLIQISTGNSDAHIIQLDREKYDAPNLNKVLSDASIIKIFHYGRADMAHIKHYLKTETNN 98
Query: 194 LFDTYHAAK 220
+ DT A+K
Sbjct: 99 ILDTKIASK 107
>UniRef50_Q1N1A2 Cluster: Ribonuclease D; n=1; Oceanobacter sp.
RED65|Rep: Ribonuclease D - Oceanobacter sp. RED65
Length = 382
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 274 VDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQII 405
+D +K +DW RPL D I YA D +LL + + ++ Q++
Sbjct: 136 IDLEKGATRSDWLQRPLTDEQIHYAADDVEHLLEITKRLETQLV 179
>UniRef50_A5EXN2 Cluster: Ribonuclease D; n=2; Dichelobacter
nodosus|Rep: Ribonuclease D - Dichelobacter nodosus
(strain VCS1703A)
Length = 355
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 265 YCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVM 390
Y G+D DK+ +DW RPL + +YA D LL + ++
Sbjct: 123 YLGIDLDKSETRSDWLARPLTNEQCQYAANDVGLLLQAYPLL 164
>UniRef50_Q8N9H8 Cluster: CDNA FLJ37119 fis, clone BRACE2022333;
n=12; Eutheria|Rep: CDNA FLJ37119 fis, clone
BRACE2022333 - Homo sapiens (Human)
Length = 758
Score = 34.3 bits (75), Expect = 4.2
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 205 IPRSQVTRSARAFAQISLM--KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYV 378
+P V R AR +SL+ + G DKT +L++W RPL + + YA D + LL V
Sbjct: 504 VPAPAVDR-ARELRGLSLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEV 562
Query: 379 WRVM 390
+ +
Sbjct: 563 HQAL 566
>UniRef50_A6RX88 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1052
Score = 34.3 bits (75), Expect = 4.2
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 429 YATVGLRGQPSDLRLYIQ*RGDSRREPIPLYIR-SKKNFDNQQMAALKMLYKWRDSQARQ 605
Y +V + + DLRLY+ +R + L +R + F+ + M L L W S RQ
Sbjct: 146 YPSVSIAAKSGDLRLYVH-SEIEKRTKMALAVRPGDETFEKENMTTLDELLNWCSSLIRQ 204
Query: 606 LDES----TTYLLPNHMLLSLSE 662
+S + LLSLSE
Sbjct: 205 KSQSDELELAHFTVKEYLLSLSE 227
>UniRef50_P34607 Cluster: Probable exonuclease mut-7; n=2;
Caenorhabditis|Rep: Probable exonuclease mut-7 -
Caenorhabditis elegans
Length = 910
Score = 34.3 bits (75), Expect = 4.2
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 235 RAFAQISLMKYC-GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
+ F L Y G++ DKT + ++W+ RPL I YA +D ++ ++ + + + EK
Sbjct: 548 KTFKLADLTHYLLGLELDKTEQCSNWQCRPLRKKQIVYAALDAVVVVETFKKILSIVEEK 607
Query: 412 N 414
N
Sbjct: 608 N 608
>UniRef50_O67779 Cluster: DNA polymerase I; n=6; Aquificales|Rep:
DNA polymerase I - Aquifex aeolicus
Length = 574
Score = 34.3 bits (75), Expect = 4.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 271 GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLL 438
G DK+Y+ +DW L D +KYA D L ++ M++ + E +A + LL
Sbjct: 118 GYSMDKSYQTSDWGASVLSDAQLKYAANDVIVLRELFPKMRDMLNELDAERGEELL 173
>UniRef50_Q5FG63 Cluster: Ribonuclease D; n=5; canis group|Rep:
Ribonuclease D - Ehrlichia ruminantium (strain Gardel)
Length = 389
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 262 KYCGVDTDK-TYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQII 405
++ V DK T + ++W +RPL D I+YA D YL +++V+ + +I
Sbjct: 129 QFLDVSLDKLTLKRSNWLMRPLSDDKIQYALDDVVYLYELYQVLYDNLI 177
>UniRef50_P41001 Cluster: DNA topoisomerase 2; n=11; Plasmodium|Rep:
DNA topoisomerase 2 - Plasmodium falciparum (isolate K1
/ Thailand)
Length = 1398
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 325 PDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDE 504
PD I M T LL+VW KN++++KN L +F++ A +E E
Sbjct: 24 PDTYIGSVEMHTQ-LLWVWNKEKNRMVQKNITYVPGLYKIFDEIIVNAADVKAREKEKSE 82
Query: 505 SP 510
+P
Sbjct: 83 NP 84
>UniRef50_Q5GT27 Cluster: Ribonuclease D; n=5; Wolbachia|Rep:
Ribonuclease D - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 399
Score = 33.5 bits (73), Expect = 7.3
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +2
Query: 17 LIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGL 196
LIQIS E FI+DALA + + + + + KVFH D+ L F +
Sbjct: 43 LIQISYGEKS-FIVDALAPEVDLSFIKKIMLNREITKVFHSCRQDIESLFTVFKCIPAPI 101
Query: 197 FDTYHAA 217
FDT AA
Sbjct: 102 FDTQVAA 108
>UniRef50_Q3ICG4 Cluster: Putative RNase D, processing tRNAs; n=3;
Alteromonadales|Rep: Putative RNase D, processing tRNAs
- Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 376
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 101 VFTDPKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLG 229
+ DP LKVFH D+ Q+ G LFDT A + LG
Sbjct: 69 ILKDPAVLKVFHSPSEDIEVFQKYAGFVPTPLFDTQFALQILG 111
>UniRef50_Q0F2Y2 Cluster: Ribonuclease D; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ribonuclease D - Mariprofundus
ferrooxydans PV-1
Length = 398
Score = 33.5 bits (73), Expect = 7.3
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 17 LIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGL 196
L+QI + G ++ID + +++ +++ +P LKVFH A D+ + + G + L
Sbjct: 46 LLQIYGN-GQCWVIDPITIKDLAPVWDIML-NPAILKVFHAARQDIEIIFNEAGGLPLPL 103
Query: 197 FDTYHAAKSLG 229
FDT AA LG
Sbjct: 104 FDTQVAAALLG 114
>UniRef50_A7BCR3 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 414
Score = 33.5 bits (73), Expect = 7.3
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 271 GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIE 408
G+ K ++ +DW +RPLP ++YA +D L ++ + ++ E
Sbjct: 149 GLGLVKDHQASDWSVRPLPKEWLRYAALDVELLTELYYRLSKRLDE 194
>UniRef50_Q7YU43 Cluster: RE33408p; n=4; Diptera|Rep: RE33408p -
Drosophila melanogaster (Fruit fly)
Length = 1004
Score = 33.5 bits (73), Expect = 7.3
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHK--LNVVFTDPKKLKVFHGADSDVLWLQRDF 175
+G LI+I T G F+ D + + L V + +KV H +D L F
Sbjct: 570 KGEITLIEIGTTRGEAFLFDVQSCPAMVTDGGLKTVLEHDQVIKVIHDCRNDAANLYLQF 629
Query: 176 GVYLVGLFDTYHA 214
G+ L +FDT A
Sbjct: 630 GILLRNVFDTQAA 642
>UniRef50_Q17I49 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 939
Score = 33.5 bits (73), Expect = 7.3
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 QGITCLIQISTDEGGDFIIDALAVREHIHK--LNVVFTDPKKLKVFHGADSDVLWLQRDF 175
+G +IQ+ T G FI D + + + + V K +KV H +D + L F
Sbjct: 493 RGQITMIQLGTTRGEAFIFDVASCPDMVPHGGIKEVLESEKVIKVIHDCRNDSVNLFNQF 552
Query: 176 GVYLVGLFDTYHA 214
+ L +FDT A
Sbjct: 553 QILLKNVFDTQSA 565
>UniRef50_Q2H2D9 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 423
Score = 33.5 bits (73), Expect = 7.3
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +3
Query: 429 YATVGLRGQPSDLRLYIQ*RGDSRREPIPLYIRSKKNFDNQQMAALKMLYKWRDSQARQL 608
Y T+ + RLY Q G R IPLY+ ++ D++ ++A + + + +
Sbjct: 95 YDTIDVDAYEQTRRLYPQWTGRRDRRGIPLYLYQIRHLDSKTVSAYEKASESTNVSKAET 154
Query: 609 DESTTYLLPNHMLLSLSENLPRELQ 683
D ST L L +L ENL R Q
Sbjct: 155 DGSTPQRLLR--LFALYENLTRFAQ 177
>UniRef50_Q1E2I8 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1775
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 576 YKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNV 734
+++ S A + ESTT + H + S SE EL+G N P+PP Q V
Sbjct: 1262 HEYEPSTATESTESTTSTVERHTIDSSSETSDEELEG-NDIVTPLPPINAQRV 1313
>UniRef50_Q6A8V2 Cluster: Ribonuclease D; n=1; Propionibacterium
acnes|Rep: Ribonuclease D - Propionibacterium acnes
Length = 412
Score = 33.1 bits (72), Expect = 9.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYL 369
+YCGV K + +DW RPLP YA +D L
Sbjct: 137 RYCGVTLLKEHSASDWSRRPLPRDWQVYAALDVELL 172
>UniRef50_Q2YC78 Cluster: Response regulator receiver (CheY-like)
modulated diguanylate cyclase/phosphodiesterase; n=1;
Nitrosospira multiformis ATCC 25196|Rep: Response
regulator receiver (CheY-like) modulated diguanylate
cyclase/phosphodiesterase - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 980
Score = 33.1 bits (72), Expect = 9.7
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +3
Query: 465 LRLYIQ*RGDSRREPIPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHM 644
LRL I+ R +E + LY + K + + Q++ L+ L +W D ES T L P H
Sbjct: 725 LRLEIKLRQALEQEQLMLYYQPKVDLKSGQISGLEALMRWHD------PESATVLSPLHF 778
Query: 645 LLSLSE 662
+ L E
Sbjct: 779 IPLLEE 784
>UniRef50_Q1LCF8 Cluster: Sensor protein; n=1; Ralstonia metallidurans
CH34|Rep: Sensor protein - Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839)
Length = 1744
Score = 33.1 bits (72), Expect = 9.7
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +2
Query: 53 IIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGL 232
+I + VR+ I L+V +L + HGA + + FGV++ L+D Y + GL
Sbjct: 923 LISSQFVRDGISFLHVATM--VELSLAHGATPETPYGLSWFGVFIASLYDAYEDGLAFGL 980
Query: 233 PALSL----KFL**SIAALTPIKRI-VW 301
A++L +F IA L + ++ VW
Sbjct: 981 AAMALVERHEFQAEQIATLVAVDQVSVW 1008
>UniRef50_A6FH72 Cluster: RNase D, processes tRNA; n=1; Moritella
sp. PE36|Rep: RNase D, processes tRNA - Moritella sp.
PE36
Length = 376
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLS 441
+Y + DK ++W RPL + + YA D ++LL W ++ ++ E G + L
Sbjct: 122 EYQKITLDKGESRSNWLARPLTEKQLSYAAADVYHLLPCWNELEAKLNE--LGYYDYYLQ 179
Query: 442 VFEDSRQTCASTYNKEVIHDE 504
++ R+ N + ++ +
Sbjct: 180 ELDNLRRRKMQKKNPKTVYKQ 200
>UniRef50_Q9FIN8 Cluster: Genomic DNA, chromosome 5, TAC
clone:K16H17; n=7; core eudicotyledons|Rep: Genomic DNA,
chromosome 5, TAC clone:K16H17 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 505
Score = 33.1 bits (72), Expect = 9.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 274 VDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIE 408
+ K + +DW RPL + YA D H LL ++ V + ++E
Sbjct: 163 ISLSKELQCSDWSYRPLTEEQKLYAATDAHCLLQIFDVFEAHLVE 207
>UniRef50_Q4QIB7 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 2327
Score = 33.1 bits (72), Expect = 9.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 203 CRKDPPNTRRNHVEAKEHRYRHRGTPLVSWGQ 108
CR P T +A HR RHR TP++S GQ
Sbjct: 1344 CRHVWPGTNVEPAKASHHRQRHRCTPMLSAGQ 1375
>UniRef50_A7AQX3 Cluster: DNA polymerase I, putative; n=1; Babesia
bovis|Rep: DNA polymerase I, putative - Babesia bovis
Length = 1613
Score = 33.1 bits (72), Expect = 9.7
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQI 402
+Y + DK+ + +DW + PL + + YA DT LL ++ +++ ++
Sbjct: 1166 RYLNIVLDKSQQFSDWTLDPLFEEQVIYASRDTAVLLPLYFILQEKL 1212
>UniRef50_A5K9X6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1581
Score = 33.1 bits (72), Expect = 9.7
Identities = 26/87 (29%), Positives = 37/87 (42%)
Frame = -2
Query: 710 HRIAASVDAL*LARQILGERQQHVVRQKVRGAFVQLPRLRVSPFVEHLKSRHLLIIEILL 531
+RI +D L +A + ++ KVR A L + PFVEHL + L
Sbjct: 39 NRITCHIDPLDVAENVFASIAS-ILCNKVRVALYLLGSKKDDPFVEHLPRNEATLAHTPL 97
Query: 530 RTYV*WYGLSS*ITSLLYVEAQV*RLS 450
R Y+ Y + S L +E V LS
Sbjct: 98 RDYLRGYDMCSSERCRLTIEHYVKALS 124
>UniRef50_A5K2N0 Cluster: 3'-5' exonuclease domain containing
protein; n=1; Plasmodium vivax|Rep: 3'-5' exonuclease
domain containing protein - Plasmodium vivax
Length = 752
Score = 33.1 bits (72), Expect = 9.7
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 184 FGGSFRHIPRSQVTRSARAFAQISLM--KYCGVDTDKTYRLADWRIRPLPDVLIKYARMD 357
F G+ R P S+ T F +S + K+ G + +K +L++W RPL + I YA D
Sbjct: 652 FEGAIRVCP-SRTTDKLH-FKSLSHLCQKFLGKNLNKQLQLSNWSRRPLMESQIHYAATD 709
Query: 358 THYLLYVWRVM 390
+ L+ + R++
Sbjct: 710 AYVLIVLERLL 720
>UniRef50_Q8NHD1 Cluster: HBE269; n=4; Eutheria|Rep: HBE269 - Homo
sapiens (Human)
Length = 514
Score = 33.1 bits (72), Expect = 9.7
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 205 IPRSQVTRSARAFAQISLM--KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYV 378
+P V R AR ++L+ + G DKT +L++W RPL + + YA D + LL V
Sbjct: 184 VPAPAVDR-ARELRGLTLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEV 242
Query: 379 WRVM 390
+ +
Sbjct: 243 HQAL 246
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 895,112,259
Number of Sequences: 1657284
Number of extensions: 18635422
Number of successful extensions: 50408
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 48126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50368
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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