Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120294.Seq
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.15 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.79 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 204 VSKRPTKYTPKSR*SQRTSLSAPWNTFSFLGSVKTTFSLCMCSLTARASMIKSPPSSVDI 25
           +S  P  Y P     Q T  SAP  T+S   +V+T  ++   ++    S+  SPP    I
Sbjct: 278 LSPPPHVYNPPDHIQQATPYSAPGPTYSTWSTVQTPTTVMSPTINC-WSLTSSPPPPYQI 336


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 245 AKARADLVTWLRGMCRKDPPNTRR 174
           A+ +ADL +  R +C+ D P  RR
Sbjct: 162 AQMKADLRSHFRALCQDDTPMVRR 185


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 326 GSGRMRQSARRYVLSVSTPQ 267
           G GRMRQ     + SV  PQ
Sbjct: 172 GDGRMRQHVMHNLSSVPQPQ 191


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 832 PAFIMFLMPDGYVEYLSVLR 773
           P FI  LM   Y  YL++LR
Sbjct: 187 PYFINLLMELQYCHYLNILR 206


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 519 IMVWALVVNHLFIVCR 472
           I  W ++  H+F VCR
Sbjct: 154 IFGWNILFGHIFTVCR 169


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 832 PAFIMFLMPDGYVEYLSVLR 773
           P FI  LM   Y  YL++LR
Sbjct: 187 PYFINLLMELQYCHYLNILR 206


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 326 GSGRMRQSARRYVLSVSTPQ 267
           G GRMRQ     + SV  PQ
Sbjct: 172 GDGRMRQHVMHNLSSVPQPQ 191


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 326 GSGRMRQSARRYVLSVSTPQ 267
           G GRMRQ     + SV  PQ
Sbjct: 172 GDGRMRQHVMHNLSSVPQPQ 191


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 693 ACCDPMPPFVKQNVITIHRMILSFANC 773
           A  DP  PF+   V  I  ++ S  +C
Sbjct: 287 ATWDPQSPFIDGPVFVILTLLYSLNSC 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,409
Number of Sequences: 336
Number of extensions: 4426
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)