Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120294.Seq
(885 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 27 0.57
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 27 1.0
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 27 1.0
AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative 5-oxoprol... 26 1.8
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 26 1.8
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 3.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 25 3.1
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 25 3.1
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 4.1
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 9.4
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 9.4
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 27.5 bits (58), Expect = 0.57
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 540 NSSSNVCIMVWALVVNHLFIVCRGASLTAVLEDRQ*HIRLSSILLDY 400
N+ C+MV AL V + F + L D+ ++L +IL DY
Sbjct: 561 NNRDRRCLMVVALDVRNAFNTASWQCIAEALRDKGVPLQLCNILQDY 607
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.6 bits (56), Expect = 1.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 540 NSSSNVCIMVWALVVNHLFIVCRGASLTAVLEDRQ*HIRLSSILLDY 400
N+ C+MV AL V + F S+ L+ + ++L IL DY
Sbjct: 566 NNRDRRCLMVVALDVRNAFNTASWQSIAEALQAKGVPVQLCRILQDY 612
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 26.6 bits (56), Expect = 1.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 540 NSSSNVCIMVWALVVNHLFIVCRGASLTAVLEDRQ*HIRLSSILLDY 400
N+ C++V AL V + F + LED+ +L +IL DY
Sbjct: 563 NNRDKRCLLVVALDVRNAFNTASWQCIATALEDKGVPRQLRNILRDY 609
>AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 756
Score = 25.8 bits (54), Expect = 1.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 821 HVPYAGRLCGISERPSAIRER*DHTMDGYHILFDEWRHRIAASVDAL*LARQIL 660
H+ Y G C + P + E DHT+ G+ +R R + + R+IL
Sbjct: 553 HLRYEGTDCALMCAPDRVVENADHTVYGFGDFGRTFRDRYRSEFGFVLEGRRIL 606
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 25.8 bits (54), Expect = 1.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 821 HVPYAGRLCGISERPSAIRER*DHTMDGYHILFDEWRHRIAASVDAL*LARQIL 660
H+ Y G C + P + E DHT+ G+ +R R + + R+IL
Sbjct: 597 HLRYEGTDCALMCAPDRVVENADHTVYGFGDFGRTFRDRYRSEFGFVLEGRRIL 650
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 25.0 bits (52), Expect = 3.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -1
Query: 399 LILHNAPNVQKIVRIHASVLDQHVRKRTNAPVRQTIRF 286
+I H+ + ++ +I A + +Q +R + NAP + IR+
Sbjct: 996 VISHHGKIMDEVDKIKAQI-EQDIRDQPNAPEEEKIRY 1032
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 25.0 bits (52), Expect = 3.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -1
Query: 399 LILHNAPNVQKIVRIHASVLDQHVRKRTNAPVRQTIRF 286
+I H+ + ++ +I A + +Q +R + NAP + IR+
Sbjct: 997 VISHHGKIMDEVDKIKAQI-EQDIRDQPNAPEEEKIRY 1033
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 25.0 bits (52), Expect = 3.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 300 QTIRFIGVNAAIL--HQRNLSESAGRPSDLAAWYVSKRPTKYTPKSR 166
+T++++GV+ H R+L A + S + P K PKSR
Sbjct: 724 ETLKYLGVDLCRKQHHSRHLERVANKASRITNALTCLMPNKRGPKSR 770
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 593 AGAATGRKHHVPSAEPH 643
A AATG HH A PH
Sbjct: 716 AAAATGHHHHQHHAAPH 732
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 9.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 535 FFERMYNGMGSRRESPLYC 479
+ + +N GSR+ P YC
Sbjct: 763 YAQHHFNSQGSRKAEPYYC 781
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.4 bits (48), Expect = 9.4
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -1
Query: 549 DYRNSSSNVCIMVWALVVNHLFIVCRG 469
D + SSN C+ H F C G
Sbjct: 122 DQESCSSNECVSTTETPTRHFFCCCSG 148
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 933,487
Number of Sequences: 2352
Number of extensions: 19899
Number of successful extensions: 51
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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