Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120294.Seq
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 105 6e-23
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 105 6e-23
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 97 2e-20
Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical pr... 34 0.12
U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical pr... 32 0.63
AL117195-9|CAB55016.2| 710|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 29 4.4
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 29 4.4
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 29 4.4
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 29 4.4
Z68337-4|CAA92744.1| 364|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 5.8
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 105 bits (251), Expect = 6e-23
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G+TCLIQIST + DFIID + +H+ LN F +P+ LKVFHG+DSDVLWLQRD+GV+
Sbjct: 314 GLTCLIQISTRDE-DFIIDPFPIWDHVGMLNEPFANPRILKVFHGSDSDVLWLQRDYGVH 372
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDTY A K L P SL +L
Sbjct: 373 VVNLFDTYVAMKKLKYPKFSLAYL 396
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3
Query: 522 IRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACC 701
I+ + + +Q AL L+KWRD AR DES ++LPNHM+LSLSE LPR++ G+ ACC
Sbjct: 482 IKFRFTLNTRQDYALTHLFKWRDVVARAEDESPHFVLPNHMMLSLSETLPRDVGGIYACC 541
Query: 702 DPMPPFVKQNVITIHRMIL 758
+P+P FVKQ I ++I+
Sbjct: 542 NPLPYFVKQRTGDILKIIV 560
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/96 (35%), Positives = 59/96 (61%)
Frame = +1
Query: 259 MKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLL 438
+++ V DK Y+LADWR RPL + +I YAR DTHYLLY + +++ Q+++++ T L
Sbjct: 398 LRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLKQD---TKDLA 454
Query: 439 SVFEDSRQTCASTYNKEVIHDESPYHYTYVRRRISI 546
+V+ +S C Y K V + + + T ++ R ++
Sbjct: 455 NVYSESSDLCIKVYKKPVFNPKG--YLTEIKFRFTL 488
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 105 bits (251), Expect = 6e-23
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G+TCLIQIST + DFIID + +H+ LN F +P+ LKVFHG+DSDVLWLQRD+GV+
Sbjct: 314 GLTCLIQISTRDE-DFIIDPFPIWDHVGMLNEPFANPRILKVFHGSDSDVLWLQRDYGVH 372
Query: 185 LVGLFDTYHAAKSLGLPALSLKFL 256
+V LFDTY A K L P SL +L
Sbjct: 373 VVNLFDTYVAMKKLKYPKFSLAYL 396
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3
Query: 522 IRSKKNFDNQQMAALKMLYKWRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNACC 701
I+ + + +Q AL L+KWRD AR DES ++LPNHM+LSLSE LPR++ G+ ACC
Sbjct: 482 IKFRFTLNTRQDYALTHLFKWRDVVARAEDESPHFVLPNHMMLSLSETLPRDVGGIYACC 541
Query: 702 DPMPPFVKQNVITIHRMIL 758
+P+P FVKQ I ++I+
Sbjct: 542 NPLPYFVKQRTGDILKIIV 560
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/96 (35%), Positives = 59/96 (61%)
Frame = +1
Query: 259 MKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLL 438
+++ V DK Y+LADWR RPL + +I YAR DTHYLLY + +++ Q+++++ T L
Sbjct: 398 LRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLKQD---TKDLA 454
Query: 439 SVFEDSRQTCASTYNKEVIHDESPYHYTYVRRRISI 546
+V+ +S C Y K V + + + T ++ R ++
Sbjct: 455 NVYSESSDLCIKVYKKPVFNPKG--YLTEIKFRFTL 488
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/74 (60%), Positives = 56/74 (75%)
Frame = +2
Query: 5 GITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVY 184
G+TCLIQIST + DFIID + +H+ LN F +P+ LKVFHG+DSDVLWLQRD+GV+
Sbjct: 314 GLTCLIQISTRDE-DFIIDPFPIWDHVGMLNEPFANPRILKVFHGSDSDVLWLQRDYGVH 372
Query: 185 LVGLFDTYHAAKSL 226
+V LFDTY K L
Sbjct: 373 VVNLFDTYVKVKKL 386
>Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical
protein ZK1098.8 protein.
Length = 910
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 235 RAFAQISLMKYC-GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEK 411
+ F L Y G++ DKT + ++W+ RPL I YA +D ++ ++ + + + EK
Sbjct: 548 KTFKLADLTHYLLGLELDKTEQCSNWQCRPLRKKQIVYAALDAVVVVETFKKILSIVEEK 607
Query: 412 N 414
N
Sbjct: 608 N 608
>U41535-4|AAB63407.1| 655|Caenorhabditis elegans Hypothetical
protein F18A1.5 protein.
Length = 655
Score = 31.9 bits (69), Expect = 0.63
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +1
Query: 373 YVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCASTYNKEV--IHDESPYHYTYVRRRISI 546
+ W M + GQ + ++ F DS E+ +HDESP Y + R+
Sbjct: 546 FKWLYMMQFELSDETGQ--VYVTAFGDSAAKIVGKSAAELGELHDESPDEYNAIFERLQF 603
Query: 547 ISKWRLLRC---STNGETRRR 600
+ K LRC S N E R++
Sbjct: 604 VPKMWRLRCKMDSYNEEVRQK 624
>AL117195-9|CAB55016.2| 710|Caenorhabditis elegans Hypothetical
protein Y57A10A.13 protein.
Length = 710
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 262 KYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVW 381
K G DKT + + W RPL + ++YA MD + +L ++
Sbjct: 635 KLLGRPLDKTEQCSVWDRRPLRCLQLRYAAMDAYCMLLLY 674
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 388 MKNQIIEKNAGQTNMLLSVFEDSRQTCASTYN 483
+ N II N+ ++ ++F+D R TC TYN
Sbjct: 227 LANSIITTNSVNISISENLFQDKRSTCEITYN 258
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 875 FVIEVVHFIMYLLYPGVHHV 816
F +EV+ F Y L+P +HH+
Sbjct: 122 FTVEVIDFCDYFLFPDIHHL 141
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 875 FVIEVVHFIMYLLYPGVHHV 816
F +EV+ F Y L+P +HH+
Sbjct: 122 FTVEVIDFCDYFLFPDIHHL 141
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 875 FVIEVVHFIMYLLYPGVHHV 816
F +EV+ F Y L+P +HH+
Sbjct: 122 FTVEVIDFCDYFLFPDIHHL 141
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 875 FVIEVVHFIMYLLYPGVHHV 816
F +EV+ F Y L+P +HH+
Sbjct: 122 FTVEVIDFCDYFLFPDIHHL 141
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 875 FVIEVVHFIMYLLYPGVHHV 816
F +EV+ F Y L+P +HH+
Sbjct: 122 FTVEVIDFCDYFLFPDIHHL 141
>Z68337-4|CAA92744.1| 364|Caenorhabditis elegans Hypothetical
protein M7.7 protein.
Length = 364
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -1
Query: 324 KRTNAPVRQTIRFIGVNAAILHQRNLSESAGRPSDL-AAWYVS 199
+RT+AP R T+R++ VN +H+R + A R D+ +A+Y++
Sbjct: 187 RRTSAPFRGTLRYVSVN---IHRR---QDASRWDDIWSAFYIA 223
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical
protein ZC373.4 protein.
Length = 1211
Score = 28.7 bits (61), Expect = 5.8
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Frame = +1
Query: 304 DWRIRPLPDVLIKYARMDTHYLLYVWRVMKN-QIIEK-NAGQTNMLLSVFEDSR------ 459
D +RP P+++ K A LL +V+KN +++E N+ + L SV E+
Sbjct: 462 DAGLRPPPELMTKRASTGGESLLAAVKVLKNLEVVENGNSPKRKSLCSVKEEKEIPAKKQ 521
Query: 460 ----QTCASTYNKEVIHDESPYHYTYVRRRISIISKWRLLRCSTNGETRRR 600
+T +T N ++ +P + + + +LL + NGE RR+
Sbjct: 522 TEGYKTLETTENGDIRRKSAPVKQDTLTCQDNSKVTPQLLETAPNGEIRRK 572
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 582 WRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNAC 698
W + + LD+ Y+LPN+ L+ L N+ + +GV C
Sbjct: 4783 WTKNDQKMLDDDAIYVLPNNSLVLL--NVEKYDEGVYKC 4819
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 582 WRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNAC 698
W + + LD+ Y+LPN+ L+ L N+ + +GV C
Sbjct: 4783 WTKNDQKMLDDDAIYVLPNNSLVLL--NVEKYDEGVYKC 4819
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 582 WRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNAC 698
W + + LD+ Y+LPN+ L+ L N+ + +GV C
Sbjct: 4783 WTKNDQKMLDDDAIYVLPNNSLVLL--NVEKYDEGVYKC 4819
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 582 WRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNAC 698
W + + LD+ Y+LPN+ L+ L N+ + +GV C
Sbjct: 4783 WTKNDQKMLDDDAIYVLPNNSLVLL--NVEKYDEGVYKC 4819
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 582 WRDSQARQLDESTTYLLPNHMLLSLSENLPRELQGVNAC 698
W + + LD+ Y+LPN+ L+ L N+ + +GV C
Sbjct: 4783 WTKNDQKMLDDDAIYVLPNNSLVLL--NVEKYDEGVYKC 4819
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,592,186
Number of Sequences: 27780
Number of extensions: 444444
Number of successful extensions: 1299
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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