Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120293.Seq
(753 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic... 124 2e-27
UniRef50_Q06693 Cluster: Uncharacterized 12.5 kDa protein in VLF... 91 2e-17
UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1; ... 69 9e-11
UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2; ... 58 3e-07
UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1; ... 57 4e-07
UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q6D994 Cluster: UPF0213 protein ECA0725; n=6; Enterobac... 52 1e-05
UniRef50_P67349 Cluster: UPF0213 protein yhbQ; n=22; Enterobacte... 51 3e-05
UniRef50_Q91FT0 Cluster: 242L; n=1; Invertebrate iridescent viru... 50 5e-05
UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_0086... 49 1e-04
UniRef50_Q0F3H4 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q9KLK4 Cluster: UPF0213 protein VC_A0739; n=29; Gammapr... 49 1e-04
UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 48 2e-04
UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI... 48 2e-04
UniRef50_Q1PZH5 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain prote... 48 2e-04
UniRef50_Q0IL29 Cluster: ORF90; n=1; Leucania separata nuclear p... 48 3e-04
UniRef50_A6F7V2 Cluster: Excinuclease ABC, C subunit, N-terminal... 48 3e-04
UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2; Desulfov... 47 4e-04
UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular o... 47 6e-04
UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum granuloviru... 46 8e-04
UniRef50_Q8V5S5 Cluster: ORF74; n=3; Nucleopolyhedrovirus|Rep: O... 46 8e-04
UniRef50_Q0N429 Cluster: Ac78-like protein; n=1; Clanis bilineat... 46 8e-04
UniRef50_Q91BF0 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q87GU3 Cluster: UPF0213 protein VPA1222; n=11; Vibriona... 46 0.001
UniRef50_Q9KGL3 Cluster: UPF0213 protein BH0048; n=11; Bacteria|... 46 0.001
UniRef50_A4LZS0 Cluster: Excinuclease ABC, C subunit domain prot... 45 0.002
UniRef50_Q9J856 Cluster: ORF81; n=2; Nucleopolyhedrovirus|Rep: O... 44 0.003
UniRef50_A0EYZ1 Cluster: Endonuclease; n=1; Ecotropis obliqua NP... 44 0.004
UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n... 44 0.004
UniRef50_A0KPI3 Cluster: Endo/excinuclease domain protein; n=2; ... 44 0.004
UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain prot... 44 0.005
UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain prot... 44 0.005
UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15; Pseudomon... 44 0.005
UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cyd... 43 0.007
UniRef50_Q6LJI0 Cluster: Putative uncharacterized protein C3908;... 43 0.009
UniRef50_Q2ILJ9 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 43 0.009
UniRef50_Q80LN4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.012
UniRef50_Q2C4T8 Cluster: Putative uncharacterized protein; n=2; ... 42 0.012
UniRef50_Q1LH87 Cluster: Excinuclease ABC, C subunit-like protei... 42 0.012
UniRef50_A4B511 Cluster: Hypothetical URI domain endonuclease; n... 42 0.012
UniRef50_A3Y6M7 Cluster: Putative uncharacterized protein; n=1; ... 42 0.012
UniRef50_A1FNL2 Cluster: Excinuclease ABC, C subunit-like; n=4; ... 42 0.012
UniRef50_A6VVA2 Cluster: Excinuclease ABC C subunit domain prote... 42 0.016
UniRef50_Q461Z4 Cluster: Orf71; n=2; Nucleopolyhedrovirus|Rep: O... 42 0.022
UniRef50_Q21GK3 Cluster: Excinuclease ABC, C subunit-like protei... 42 0.022
UniRef50_Q089V4 Cluster: Excinuclease ABC, C subunit domain prot... 42 0.022
UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1; ... 42 0.022
UniRef50_Q5QZJ7 Cluster: Predicted endonuclease containing a URI... 41 0.029
UniRef50_Q3IE32 Cluster: Putative uncharacterized protein; n=2; ... 41 0.038
UniRef50_Q1QV31 Cluster: Excinuclease ABC, C subunit-like protei... 41 0.038
UniRef50_Q598P4 Cluster: ORF104; n=5; Nucleopolyhedrovirus|Rep: ... 40 0.050
UniRef50_A0EYW5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.050
UniRef50_Q2G9Y5 Cluster: Excinuclease ABC, C subunit-like protei... 40 0.050
UniRef50_A4J4G2 Cluster: Excinuclease ABC, C subunit domain prot... 40 0.050
UniRef50_A5FNC4 Cluster: Excinuclease ABC, C subunit domain prot... 40 0.066
UniRef50_Q8E0F5 Cluster: UPF0213 protein SAG0778; n=8; Streptoco... 40 0.066
UniRef50_UPI0000E0E642 Cluster: hypothetical protein OM2255_2012... 40 0.087
UniRef50_A6GJZ6 Cluster: Excinuclease ABC, C subunit-like protei... 39 0.12
UniRef50_Q9RHE8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_A6T193 Cluster: Uncharacterized conserved protein; n=1;... 38 0.27
UniRef50_Q8P698 Cluster: UPF0213 protein XCC3072; n=7; Proteobac... 38 0.27
UniRef50_Q7NMN4 Cluster: Gll0731 protein; n=1; Gloeobacter viola... 38 0.35
UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal... 38 0.35
UniRef50_A4B9D9 Cluster: Excinuclease ABC, C subunit-like protei... 38 0.35
UniRef50_Q193D5 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 37 0.46
UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain prot... 37 0.46
UniRef50_Q4UJM5 Cluster: Endo/excinuclease amino terminal domain... 36 0.81
UniRef50_Q1PYT5 Cluster: Predicted orf; n=1; Candidatus Kuenenia... 36 0.81
UniRef50_A3WNM7 Cluster: Predicted endonuclease containing a URI... 36 0.81
UniRef50_A0NJ82 Cluster: Methyltransferase; n=2; Oenococcus oeni... 36 0.81
UniRef50_Q84LK0 Cluster: DNA mismatch repair protein; n=7; core ... 36 0.81
UniRef50_Q4L3E5 Cluster: UPF0213 protein SH2523; n=25; cellular ... 36 0.81
UniRef50_Q9YMP0 Cluster: LdOrf-87 peptide; n=1; Lymantria dispar... 36 1.1
UniRef50_Q0IKZ8 Cluster: ORF121; n=1; Leucania separata nuclear ... 36 1.1
UniRef50_Q2S0D1 Cluster: GIY-YIG catalytic domain, putative; n=3... 36 1.4
UniRef50_A7NLC7 Cluster: Excinuclease ABC C subunit domain prote... 36 1.4
UniRef50_Q15PT6 Cluster: Excinuclease ABC, C subunit-like; n=1; ... 35 1.9
UniRef50_Q51440 Cluster: UPF0213 protein in ldhD 5'region; n=3; ... 35 1.9
UniRef50_Q97PR7 Cluster: UPF0213 protein SP_1535; n=73; Bacilli|... 35 1.9
UniRef50_Q81W06 Cluster: UPF0213 protein BA_0032/GBAA0032/BAS003... 35 1.9
UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34; Nuc... 35 1.9
UniRef50_Q62LB3 Cluster: Endo/excinuclease domain protein; n=20;... 35 2.5
UniRef50_Q2G9S1 Cluster: Excinuclease ABC, C subunit-like protei... 35 2.5
UniRef50_O31414 Cluster: UPF0213 protein yazA; n=4; Bacillus|Rep... 35 2.5
UniRef50_Q30TF2 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 34 3.3
UniRef50_A1RI21 Cluster: Excinuclease ABC, C subunit domain prot... 34 3.3
UniRef50_Q8RIL3 Cluster: UPF0213 protein FN1575; n=3; Fusobacter... 34 3.3
UniRef50_Q5WYF4 Cluster: Putative uncharacterized protein; n=3; ... 34 4.3
UniRef50_Q39DX9 Cluster: Excinuclease ABC, C subunit-like; n=9; ... 34 4.3
UniRef50_A4JGU7 Cluster: Excinuclease ABC, C subunit domain prot... 34 4.3
UniRef50_A3J1S6 Cluster: Predicted endonuclease containing a URI... 34 4.3
UniRef50_A4G800 Cluster: Putative uncharacterized protein; n=3; ... 33 5.7
UniRef50_A1G1C7 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 33 5.7
UniRef50_Q9FHS4 Cluster: Emb|CAB76036.1; n=1; Arabidopsis thalia... 33 5.7
UniRef50_P95364 Cluster: UPF0213 protein in glnA 3'region; n=5; ... 33 5.7
UniRef50_UPI0000DA3F67 Cluster: PREDICTED: hypothetical protein;... 33 7.6
UniRef50_Q12CT1 Cluster: Twin-arginine translocation pathway sig... 33 7.6
UniRef50_Q0LV83 Cluster: Excinuclease ABC, C subunit-like; n=1; ... 33 7.6
UniRef50_Q0LU34 Cluster: Excinuclease ABC, C subunit-like; n=4; ... 33 7.6
UniRef50_A5VJC3 Cluster: Excinuclease ABC, C subunit domain prot... 33 7.6
UniRef50_A5VFF5 Cluster: Excinuclease ABC, C subunit domain prot... 33 7.6
UniRef50_A5FFT3 Cluster: Excinuclease ABC, C subunit domain prot... 33 7.6
UniRef50_A0W851 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 33 7.6
UniRef50_Q0UAL6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_UPI00003839BD Cluster: COG2827: Predicted endonuclease ... 33 10.0
UniRef50_Q186F2 Cluster: Putative endonuclease; n=1; Clostridium... 33 10.0
UniRef50_Q9CEL6 Cluster: UPF0213 protein ysiG; n=3; Lactococcus ... 33 10.0
UniRef50_Q88VJ1 Cluster: UPF0213 protein lp_2058; n=6; Lactobaci... 33 10.0
UniRef50_Q8EZM8 Cluster: 4-diphosphocytidyl-2-C-methyl-D-erythri... 33 10.0
>UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic
region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein
in VLF1-GP41 intergenic region - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 104
Score = 124 bits (299), Expect = 2e-27
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 86 MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV+
Sbjct: 1 MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 57
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 240 IYGSCSQREAYDYKTAARMEYNLKRKCSKYFKLRLI 347
+Y S S AYDY TAARMEYNLKRKCSKYFKLRLI
Sbjct: 56 VYHSAS---AYDYNTAARMEYNLKRKCSKYFKLRLI 88
>UniRef50_Q06693 Cluster: Uncharacterized 12.5 kDa protein in
VLF1-GP41 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.5 kDa
protein in VLF1-GP41 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 109
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = +1
Query: 511 EPVYKMPIDDMMVGYNNTTSNVSAGIIILISXXXXXXXXXXXXXXXXXXXXREQQQYSDS 690
EPV+KMPI+DM VGY+NTTSNVSAGIIILIS REQQQYSDS
Sbjct: 38 EPVHKMPINDM-VGYDNTTSNVSAGIIILISVVAFIALFLLLYVIYYFVILREQQQYSDS 96
Query: 691 IDTDSPFVFNKLD 729
IDTDSPFVFNK D
Sbjct: 97 IDTDSPFVFNKFD 109
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/42 (85%), Positives = 37/42 (88%)
Frame = +2
Query: 401 MNLDVPYYRLGNHEKVEYIPLKLALNDDITSEPQQFASPFTK 526
MNLDVPYYRLGNHEKVEYIPLKLALNDD SEPQQF+ P K
Sbjct: 1 MNLDVPYYRLGNHEKVEYIPLKLALNDDTASEPQQFSEPVHK 42
>UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 135
Score = 69.3 bits (162), Expect = 9e-11
Identities = 27/56 (48%), Positives = 42/56 (75%)
Frame = +2
Query: 95 TLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTA 262
++YT +WC+Y++R G +YTGITSN+++R KQH + GAKCLR+ T L V+++
Sbjct: 9 SVYTKNIWCLYMIRMPCGSIYTGITSNVDKRFKQHCDGTGAKCLRSKTPLVKVYSS 64
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 270 YDYKTAARMEYNLKRKCSKYFKLRLI 347
YD+KT AR+EY +K + +K FK +LI
Sbjct: 68 YDHKTVARIEYEIKHRRNKSFKEKLI 93
>UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 96
Score = 64.1 bits (149), Expect = 4e-09
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2
Query: 98 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
++ + WCVYI+R NG+LYTG+++ + R + H N +GAKCLR T L LV+
Sbjct: 1 MFKSNSWCVYIIRMPNGRLYTGMSNRVLNRFRDHCNGRGAKCLRGKTPLALVY 53
>UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 98
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATN-LRLVF 256
+WC+Y++R LYTGIT N++RR QH+ +GAKCLR + N L+L +
Sbjct: 1 MWCLYLIRAKGDMLYTGITKNISRRFYQHNKGRGAKCLRASKNALQLAY 49
>UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1;
Spodoptera frugiperda ascovirus 1a|Rep: 13 kDa
GIY-YIG-like endonuclease - Spodoptera frugiperda
ascovirus 1a
Length = 112
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTA 262
W +Y+++ NG +YTG + ++ RR K H + +GAKCLR A LRL++T+
Sbjct: 7 WKLYMIQMVNGNIYTGASKDVERRFKMHCSGRGAKCLRGAQGLRLIWTS 55
>UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 105
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFT 259
+W +Y++ G YTGIT+++ RR KQH + +GAK LR T L+LVF+
Sbjct: 3 IWFIYLIETPIGHWYTGITTDVERRFKQHQSGKGAKNLRGKTPLKLVFS 51
>UniRef50_Q6D994 Cluster: UPF0213 protein ECA0725; n=6;
Enterobacteriaceae|Rep: UPF0213 protein ECA0725 -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 103
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
W +Y+LR G LYTGIT++++RR+ QH +GAK LR L LVF
Sbjct: 10 WYLYMLRTVAGALYTGITTDVSRRMNQHQAGKGAKALRGKGELTLVF 56
>UniRef50_P67349 Cluster: UPF0213 protein yhbQ; n=22;
Enterobacteriaceae|Rep: UPF0213 protein yhbQ -
Salmonella typhimurium
Length = 100
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTAR 265
W +Y++R + LYTGIT+++ RR +QH +GAK LR L L F A+
Sbjct: 4 WYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQ 53
>UniRef50_Q91FT0 Cluster: 242L; n=1; Invertebrate iridescent virus
6|Rep: 242L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 99
Score = 50.4 bits (115), Expect = 5e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRL 250
W +Y++ NG +YTGI++N+ +R H N +GAKCLR L+L
Sbjct: 7 WNIYMVTMKNGNIYTGISNNVLKRFDTHCNGKGAKCLRGKGPLKL 51
>UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_00865;
n=1; Methylophilales bacterium HTCC2181|Rep:
hypothetical protein MB2181_00865 - Methylophilales
bacterium HTCC2181
Length = 102
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTAR 265
W VYIL+ + LYTGIT+N+++RI+ H GAK + + +L+FT +
Sbjct: 25 WFVYILKCSDDTLYTGITNNVSKRIEDHEKGVGAKYTKGRSPFQLLFTEK 74
>UniRef50_Q0F3H4 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 97
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
W +Y++R G+LYTGIT+++ RR+ +H + +GAK LR L L F
Sbjct: 12 WSLYMIRCKGGQLYTGITTHVERRLAEHQSGKGAKFLRGKGPLVLAF 58
>UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 88
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQH---SNKQGAKCLRNATNLRLVFT 259
K W +YI+ ++GKLYTGIT++++RR +H +N +GAK R+ +V+T
Sbjct: 5 KTWWLYIVETESGKLYTGITTDVDRRFHEHFDKNNSRGAKFFRSDPAKAVVYT 57
>UniRef50_Q9KLK4 Cluster: UPF0213 protein VC_A0739; n=29;
Gammaproteobacteria|Rep: UPF0213 protein VC_A0739 -
Vibrio cholerae
Length = 101
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFT 259
W VY++R N LY GIT++++RR QH +GAK LR L LV++
Sbjct: 11 WFVYLVRCANNALYCGITTDVSRRFAQHQKGRGAKALRGKGPLELVWS 58
>UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Desulfuromonas acetoxidans DSM 684
Length = 86
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTARG 268
W VYI+R + LYTGIT++L RR QH++ +GA+ R + +V+ G
Sbjct: 6 WLVYIIRCRDNSLYTGITTDLERRFAQHASGRGARYFRGHEPIEVVYHESG 56
>UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI
domain; n=1; Hahella chejuensis KCTC 2396|Rep: Predicted
endonuclease containing a URI domain - Hahella
chejuensis (strain KCTC 2396)
Length = 105
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTARG 268
WCVY+L + LYTGIT+N +R + H GAK R +RL++ G
Sbjct: 11 WCVYMLLVSDNSLYTGITNNPAKRFRDHLQGSGAKYFRGRKPVRLLYAEVG 61
>UniRef50_Q1PZH5 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 102
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLV 253
W +Y++R +G+LYTGIT+++ RR +HS +K+G+K LR L LV
Sbjct: 17 WFLYLIRCKHGRLYTGITTDVERRFAEHSSDDKKGSKYLRGKAPLTLV 64
>UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Parvibaculum lavamentivorans DS-1|Rep: Excinuclease
ABC C subunit domain protein - Parvibaculum
lavamentivorans DS-1
Length = 96
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
K W VYIL G+LYTGIT ++ R K H++ +GAK R+ RLVF
Sbjct: 7 KPWYVYILECTGGRLYTGITVDVPMRYKAHASGKGAKFTRSYRPERLVF 55
>UniRef50_Q0IL29 Cluster: ORF90; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF90 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 100
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2
Query: 401 MNLDVPYYRLGNHEKVEYIPLKLALND 481
MNLD+PY RLG +KV+YIP+KLA+ND
Sbjct: 1 MNLDIPYDRLGTSDKVDYIPMKLAVND 27
>UniRef50_A6F7V2 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Moritella sp. PE36|Rep: Excinuclease ABC, C
subunit, N-terminal - Moritella sp. PE36
Length = 87
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFT 259
+W VY++ D G LY GIT+++ RR +QH GAK R A +R+ +T
Sbjct: 6 LWIVYLIETDAG-LYCGITTDMERRYQQHCKGTGAKFFRRAKPIRIAYT 53
>UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: UPF0213
protein DVU_3309 - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 110
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 107 NKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
++VW VY+LR +G LY G+T+N+ RR+ QH +GA+ R
Sbjct: 7 DEVWFVYLLRCADGTLYCGVTNNIERRLTQHHRGRGARYTR 47
>UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular
organisms|Rep: UPF0213 protein DP2720 - Desulfotalea
psychrophila
Length = 110
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVF--TARGVRLQNR 286
W VYI++ +G LYTGIT+N+ RRI +H S+ +GA+ R+ + LV+ T R ++
Sbjct: 14 WFVYIVQCADGTLYTGITTNIARRITEHNSSAKGARYTRSRRPVMLVYRETCRDRSEASK 73
Query: 287 RPHGIQ 304
R + I+
Sbjct: 74 REYAIK 79
>UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum
granulovirus|Rep: ORF75 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 97
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/54 (35%), Positives = 38/54 (70%)
Frame = +2
Query: 104 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTAR 265
++K W +Y+++ + LYTG++ +++RR + H + +GAK LRN L+LV+ ++
Sbjct: 4 SDKSWELYMVQTPHQMLYTGVSVDVDRRFRLHCSGRGAKFLRNKQPLQLVYRSK 57
>UniRef50_Q8V5S5 Cluster: ORF74; n=3; Nucleopolyhedrovirus|Rep:
ORF74 - Helicoverpa zea SNPV
Length = 110
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = +2
Query: 401 MNLDVPYYRLGNHEKVEYIPLKLALND 481
MNLD+PY RLG ++KV+YIPLKLA++D
Sbjct: 1 MNLDIPYDRLGVNDKVDYIPLKLAISD 27
>UniRef50_Q0N429 Cluster: Ac78-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac78-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 114
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 401 MNLDVPYYRLGNHEKVEYIPLKLALND 481
MNL++PY RL + KVEYIPLKLALND
Sbjct: 1 MNLEIPYERLSDKTKVEYIPLKLALND 27
>UniRef50_Q91BF0 Cluster: Putative uncharacterized protein; n=1;
Spodoptera litura NPV|Rep: Putative uncharacterized
protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 120
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/33 (69%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Frame = +2
Query: 401 MNLDVPYYRLG-NHEKVEYIPLKLALNDDITSE 496
MNLDVPY RLG +EKVEYIPLKLA+N + S+
Sbjct: 1 MNLDVPYDRLGITNEKVEYIPLKLAINVNSDSD 33
>UniRef50_Q87GU3 Cluster: UPF0213 protein VPA1222; n=11;
Vibrionales|Rep: UPF0213 protein VPA1222 - Vibrio
parahaemolyticus
Length = 106
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
W VY++R + LY G+T+++ RR KQH +GAK L+
Sbjct: 9 WSVYLIRNNRNALYCGVTNDIERRFKQHQLGKGAKALK 46
>UniRef50_Q9KGL3 Cluster: UPF0213 protein BH0048; n=11;
Bacteria|Rep: UPF0213 protein BH0048 - Bacillus
halodurans
Length = 94
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFT 259
VYIL +G YTG T++++RRIK+H++ +GAK R RLV T
Sbjct: 5 VYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLVAT 50
>UniRef50_A4LZS0 Cluster: Excinuclease ABC, C subunit domain
protein; n=4; Proteobacteria|Rep: Excinuclease ABC, C
subunit domain protein - Geobacter bemidjiensis Bem
Length = 93
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTARG 268
W VYI+ +G YTGIT+++ RR++QH+ GAK R ++F G
Sbjct: 3 WQVYIILCSDGTFYTGITTDIARRLRQHATGSGAKYFRGRRPEEVLFLEGG 53
>UniRef50_Q9J856 Cluster: ORF81; n=2; Nucleopolyhedrovirus|Rep:
ORF81 - Spodoptera exigua MNPV
Length = 127
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 401 MNLDVPYYRLGNHEKVEYIPLKLALND 481
M+LDVPY RLG KV+YIPLKLAL D
Sbjct: 1 MSLDVPYERLGTATKVDYIPLKLALTD 27
>UniRef50_A0EYZ1 Cluster: Endonuclease; n=1; Ecotropis obliqua
NPV|Rep: Endonuclease - Ecotropis obliqua NPV
Length = 109
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/51 (33%), Positives = 34/51 (66%)
Frame = +2
Query: 104 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
+ +++ +Y++ ++G+LY GI S++ +R +QH G+K LRN + LV+
Sbjct: 3 SQRLYALYLIETEHGQLYAGIASDVKKRFRQHYRSAGSKFLRN-KQINLVY 52
>UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n=1;
Shewanella amazonensis SB2B|Rep: Endonuclease containing
a URI domain - Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B)
Length = 106
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVF 256
+W +YI+R G+LYTG+T+N+ RR +H + AK LR L LV+
Sbjct: 4 IWQLYIIRCATGELYTGVTTNVARRFDEHQCGGARAAKYLRGRGPLTLVY 53
>UniRef50_A0KPI3 Cluster: Endo/excinuclease domain protein; n=2;
Aeromonas|Rep: Endo/excinuclease domain protein -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 136
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
W +Y++R +G LYTGI+++ RR++QH + +G++ LR L L +
Sbjct: 19 WFIYMVRTASGLLYTGISTDPLRRLRQHQSGKGSRALRGKGPLTLAW 65
>UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain
protein; n=12; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-7)
Length = 141
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVF 256
W +Y++R NG LYTGIT+++ RR +H S+ + AK LR L L++
Sbjct: 57 WYLYLIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMY 105
>UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-4)
Length = 139
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVF 256
W +Y++R NG LYTGIT+++ RR +H S+ + AK LR L L++
Sbjct: 57 WYLYLIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMY 105
>UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15;
Pseudomonas|Rep: UPF0213 protein PA3854 - Pseudomonas
aeruginosa
Length = 104
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 89 ATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
A T K W VY++R +NG LY GI+ + RR H + +GA+ ++ LV+
Sbjct: 6 AATAAIGKCWSVYLVRAENGALYCGISDDPLRRFDTHCSGKGARFFHSSPARALVY 61
>UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cydia
pomonella granulovirus|Rep: ORF65 similar to AcMNPV
ORF79 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 79
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAK 220
WCVY++R +G LYTG+++N++RR H +GA+
Sbjct: 7 WCVYMVRTPDGALYTGMSNNVHRRFVTHCIGRGAR 41
>UniRef50_Q6LJI0 Cluster: Putative uncharacterized protein C3908;
n=2; Photobacterium profundum|Rep: Putative
uncharacterized protein C3908 - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 116
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVF 256
+W VY++R + LY G+T+++ RR +H S K+GAK L+ L L +
Sbjct: 28 IWSVYLIRTVSNTLYCGVTTDVQRRYSEHQSGKKGAKYLKGKGPLTLAW 76
>UniRef50_Q2ILJ9 Cluster: Excinuclease ABC, C subunit-like; n=2;
Cystobacterineae|Rep: Excinuclease ABC, C subunit-like -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 103
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTAR 265
W VY+LR +G LY G T++L R+ +H+ +GA+ R+ + LV+ R
Sbjct: 17 WWVYLLRCGDGSLYAGATNDLAARVARHAAGRGARYTRSRLPVELVWRER 66
>UniRef50_Q80LN4 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 107
Score = 42.3 bits (95), Expect = 0.012
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +2
Query: 401 MNLDVPYYRLGNHEKVEYIPLKLALND 481
MN D+PY +L ++ KV+YIPLKLAL+D
Sbjct: 1 MNFDIPYDKLSSNAKVDYIPLKLALSD 27
>UniRef50_Q2C4T8 Cluster: Putative uncharacterized protein; n=2;
Vibrionaceae|Rep: Putative uncharacterized protein -
Photobacterium sp. SKA34
Length = 105
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHS-NKQGAKCLRNATNLRLVFTAR 265
W VY++R + LY G+T+++ RR +H +K+GAK L+ L L ++ +
Sbjct: 12 WYVYLIRTSSNTLYCGVTTDIERRFAEHQHSKKGAKYLKGKGPLTLAWSQK 62
>UniRef50_Q1LH87 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Ralstonia metallidurans CH34|Rep: Excinuclease ABC,
C subunit-like protein - Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839)
Length = 98
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 253
W +Y+L + +YTGIT+++ RR QH GAK R+ LRL+
Sbjct: 15 WFLYLLECEGESIYTGITTDVQRRYAQHRAGTGAKYTRSRRPLRLL 60
>UniRef50_A4B511 Cluster: Hypothetical URI domain endonuclease; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Hypothetical
URI domain endonuclease - Alteromonas macleodii 'Deep
ecotype'
Length = 118
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +2
Query: 107 NKVWCVYILRQDNGKLYTGITSNLNRRIKQHSN--KQGAKCLRNATNL--RLVF 256
N W +Y++ G+LYTGIT+ RRI QH K GAK L+ + L R VF
Sbjct: 21 NTQWYLYLIENKLGQLYTGITTEPKRRIAQHRGELKGGAKALKGKSPLVFRAVF 74
>UniRef50_A3Y6M7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 120
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVF 256
VW VY++R LY G+T++++RR ++H ++K+GA+ LR L L++
Sbjct: 27 VWSVYLIRTRLNTLYAGVTTDVDRRFQEHASNSKKGARYLRGKGPLALMW 76
>UniRef50_A1FNL2 Cluster: Excinuclease ABC, C subunit-like; n=4;
Pseudomonadaceae|Rep: Excinuclease ABC, C subunit-like -
Pseudomonas putida W619
Length = 94
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
K W VY++R NG LY GI+ + RR H QGA+ + + LV+
Sbjct: 11 KPWYVYLVRAANGSLYCGISDDPQRRFVAHQKGQGARYFKTSPAQALVY 59
>UniRef50_A6VVA2 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Marinomonas sp. MWYL1|Rep: Excinuclease ABC C
subunit domain protein - Marinomonas sp. MWYL1
Length = 112
Score = 41.9 bits (94), Expect = 0.016
Identities = 19/49 (38%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVF 256
W +Y+++ LYTGI+++++RR K+HS +K+GA+ L+ L LV+
Sbjct: 16 WSLYMIKTRLNTLYTGISTDVDRRFKEHSGVSKRGARYLKGKGPLELVW 64
>UniRef50_Q461Z4 Cluster: Orf71; n=2; Nucleopolyhedrovirus|Rep:
Orf71 - Trichoplusia ni SNPV
Length = 125
Score = 41.5 bits (93), Expect = 0.022
Identities = 19/28 (67%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 401 MNLDVPYYRLG-NHEKVEYIPLKLALND 481
M+L+VPY R+ N +KVEYIPLKLA+ND
Sbjct: 1 MSLEVPYERMSLNQKKVEYIPLKLAVND 28
>UniRef50_Q21GK3 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Saccharophagus degradans 2-40|Rep: Excinuclease
ABC, C subunit-like protein - Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024)
Length = 106
Score = 41.5 bits (93), Expect = 0.022
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSN-KQGAKCLRNATNLRLVFT 259
W VYIL+ +G YTG+T ++ RR+ +H++ K GAK R +++V++
Sbjct: 12 WQVYILQCADGSYYTGVTVDIARRVHEHNHAKLGAKYTRARRPVKVVYS 60
>UniRef50_Q089V4 Cluster: Excinuclease ABC, C subunit domain
protein; n=2; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella frigidimarina
(strain NCIMB 400)
Length = 107
Score = 41.5 bits (93), Expect = 0.022
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVF 256
W +YI+R N LYTGIT+++ RR +H S + AK L+ L LV+
Sbjct: 19 WYLYIIRCANSHLYTGITTDIARRFAEHQASGPKAAKYLKGKGPLTLVY 67
>UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1;
Dorea longicatena DSM 13814|Rep: Putative
uncharacterized protein - Dorea longicatena DSM 13814
Length = 114
Score = 41.5 bits (93), Expect = 0.022
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +2
Query: 125 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
YI++ + LYTG T++LN+RIK H++ +GAK + ++LV+
Sbjct: 5 YIVKCADSTLYTGWTNDLNKRIKAHNSGKGAKYTKTRRPVKLVY 48
>UniRef50_Q5QZJ7 Cluster: Predicted endonuclease containing a URI
domain; n=2; Alteromonadales|Rep: Predicted endonuclease
containing a URI domain - Idiomarina loihiensis
Length = 83
Score = 41.1 bits (92), Expect = 0.029
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVFT 259
W VY+++ + YTG+T+++ RR+ +H+ +K+GAK R + LV++
Sbjct: 3 WAVYLIKCADNTFYTGVTTDIERRVNEHNTDDKKGAKYTRARRPVALVWS 52
>UniRef50_Q3IE32 Cluster: Putative uncharacterized protein; n=2;
Alteromonadales|Rep: Putative uncharacterized protein -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 104
Score = 40.7 bits (91), Expect = 0.038
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 253
+W +YI++ G YTGIT+N+ +R+ H GAK L+ L L+
Sbjct: 22 IWYLYIVQTRYGHWYTGITTNVEQRLATHQAGNGAKNLKGKGPLLLI 68
>UniRef50_Q1QV31 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Chromohalobacter salexigens DSM 3043|Rep:
Excinuclease ABC, C subunit-like protein -
Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB13768)
Length = 99
Score = 40.7 bits (91), Expect = 0.038
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRL 250
W +Y++ G LYTG+T+++ RR ++H K+GA+ LR L L
Sbjct: 13 WYLYLVETAAGALYTGVTTDVARRFREHRDGKRGARALRGKGPLTL 58
>UniRef50_Q598P4 Cluster: ORF104; n=5; Nucleopolyhedrovirus|Rep:
ORF104 - Mamestra configurata NPV-B
Length = 151
Score = 40.3 bits (90), Expect = 0.050
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 374 ISVSK*VVNMNLDVPYYRLGNHEKVEYIPLKLALND 481
I+++ M+LD+PY RL V+YIPLKLALND
Sbjct: 31 INITIAAATMSLDIPYERLSPTLTVKYIPLKLALND 66
>UniRef50_A0EYW5 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 110
Score = 40.3 bits (90), Expect = 0.050
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 401 MNLDVPYYRLGNHEKVEYIPLKLALNDDITSEPQQFAS 514
M+ ++PY RLG V+YIPLKLALND T E + +++
Sbjct: 1 MSFEIPYERLGVKNIVDYIPLKLALND--TDESKNYSA 36
>UniRef50_Q2G9Y5 Cluster: Excinuclease ABC, C subunit-like protein;
n=3; Sphingomonadales|Rep: Excinuclease ABC, C
subunit-like protein - Novosphingobium aromaticivorans
(strain DSM 12444)
Length = 99
Score = 40.3 bits (90), Expect = 0.050
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 122 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTARGVRLQ 280
VYI+ G +Y G+TS+L RR+ QH N G+ + +RLV+ RG ++
Sbjct: 10 VYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVWAERGENIE 63
>UniRef50_A4J4G2 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Clostridiales|Rep: Excinuclease ABC, C
subunit domain protein - Desulfotomaculum reducens MI-1
Length = 88
Score = 40.3 bits (90), Expect = 0.050
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
+ VYIL+ + LYTGIT++L RR++QH + +K R ++LV+
Sbjct: 5 YVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVY 51
>UniRef50_A5FNC4 Cluster: Excinuclease ABC, C subunit domain
protein; n=5; Flavobacteriales|Rep: Excinuclease ABC, C
subunit domain protein - Flavobacterium johnsoniae UW101
Length = 107
Score = 39.9 bits (89), Expect = 0.066
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR-NATNLRLVFTA 262
K + VYIL+ + YTG T+N+ RR+ +H++ +C N L LVF A
Sbjct: 2 KRYYVYILKCSDNSYYTGFTNNIERRLNEHNSGINKECYTFNKRPLELVFYA 53
>UniRef50_Q8E0F5 Cluster: UPF0213 protein SAG0778; n=8;
Streptococcus agalactiae|Rep: UPF0213 protein SAG0778 -
Streptococcus agalactiae serotype V
Length = 88
Score = 39.9 bits (89), Expect = 0.066
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFT 259
+Y+L +G LYTG T+++ RR+ H+ +GAK R ++L+++
Sbjct: 8 MYVLECSDGTLYTGYTTDVKRRLNTHNTGKGAKYTRARLPVKLLYS 53
>UniRef50_UPI0000E0E642 Cluster: hypothetical protein OM2255_20122;
n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
protein OM2255_20122 - alpha proteobacterium HTCC2255
Length = 100
Score = 39.5 bits (88), Expect = 0.087
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLV 253
+W VYI+ G YTG+T ++ RR +HS +GAK L+ L L+
Sbjct: 4 IWSVYIIENKLGHWYTGVTVDVARRFAEHSAGGVKGAKALKGKGPLTLI 52
>UniRef50_A6GJZ6 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Excinuclease ABC,
C subunit-like protein - Plesiocystis pacifica SIR-1
Length = 95
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLR 229
W +Y+LR +G+ Y GIT +L RR+ QH+ + GAK R
Sbjct: 20 WWLYLLRSASGRSYVGITVDLERRLAQHNGELPGGAKSTR 59
>UniRef50_Q9RHE8 Cluster: Putative uncharacterized protein; n=1;
papaya bunchy top disease rickettsia|Rep: Putative
uncharacterized protein - papaya bunchy top disease
rickettsia
Length = 109
Score = 38.3 bits (85), Expect = 0.20
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 110 KVWCVYILRQ-DNGKLYTGITSNLNRRIKQHSNK 208
K + VYIL NG LY GITSN+ RRI +H NK
Sbjct: 44 KQYYVYILASIRNGTLYIGITSNIIRRICEHKNK 77
>UniRef50_A6T193 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 130
Score = 37.9 bits (84), Expect = 0.27
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 83 IMATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 253
+ ++ + W +Y+L NG +YTGI ++ R K H +GA+ R+ RL+
Sbjct: 20 VQKLSILSAMTWFLYLLECRNGSIYTGIAVDVQARYKAHMAGKGARYTRSNPPRRLL 76
>UniRef50_Q8P698 Cluster: UPF0213 protein XCC3072; n=7;
Proteobacteria|Rep: UPF0213 protein XCC3072 -
Xanthomonas campestris pv. campestris
Length = 102
Score = 37.9 bits (84), Expect = 0.27
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
K W +Y+L NG Y GIT++L RR + H GA+ R
Sbjct: 5 KPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTR 44
>UniRef50_Q7NMN4 Cluster: Gll0731 protein; n=1; Gloeobacter
violaceus|Rep: Gll0731 protein - Gloeobacter violaceus
Length = 118
Score = 37.5 bits (83), Expect = 0.35
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNA 235
VY++R NG LY G T++L R++ H++ +GA+ +R A
Sbjct: 5 VYLVRCRNGALYCGQTADLEARLRLHASGKGARSVRMA 42
>UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Thermoanaerobacter ethanolicus ATCC 33223|Rep:
Excinuclease ABC, C subunit, N-terminal -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 107
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 98 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQ 211
L K++ VY+L + GK+Y G TSN+ R H K+
Sbjct: 18 LEEGKMYYVYVLANEKGKIYIGYTSNIKERYLAHQRKE 55
>UniRef50_A4B9D9 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Reinekea sp. MED297|Rep: Excinuclease ABC, C
subunit-like protein - Reinekea sp. MED297
Length = 94
Score = 37.5 bits (83), Expect = 0.35
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLRNATNLRLVF 256
W VY ++ +G YTGIT++ +RR++QH+ + GA+ + + LVF
Sbjct: 9 WWVYFVQCADGTFYTGITTDPHRRLRQHNGELVGGARYTASRRPVTLVF 57
>UniRef50_Q193D5 Cluster: Excinuclease ABC, C subunit-like; n=2;
Desulfitobacterium hafniense|Rep: Excinuclease ABC, C
subunit-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 103
Score = 37.1 bits (82), Expect = 0.46
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
++ VYIL + LYTG T L RRI++H+ GAK R
Sbjct: 1 MYWVYILHCADHTLYTGSTPRLERRIQEHNQGSGAKYTR 39
>UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Rhizobiales|Rep: Excinuclease ABC, C
subunit domain protein - Rhodopseudomonas palustris
(strain BisA53)
Length = 95
Score = 37.1 bits (82), Expect = 0.46
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 119 CVYIL-RQDNGKLYTGITSNLNRRIKQH 199
CVYI+ + NG LYTG+TSN+ RR +H
Sbjct: 5 CVYIVANRRNGTLYTGVTSNMPRRAHEH 32
>UniRef50_Q4UJM5 Cluster: Endo/excinuclease amino terminal domain
protein; n=17; Proteobacteria|Rep: Endo/excinuclease
amino terminal domain protein - Rickettsia felis
(Rickettsia azadi)
Length = 144
Score = 36.3 bits (80), Expect = 0.81
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +2
Query: 122 VYIL-RQDNGKLYTGITSNLNRRIKQHSN 205
VYI+ + NG LYTG+TSNL +RI +H N
Sbjct: 54 VYIVTNKKNGILYTGVTSNLIKRIYEHKN 82
>UniRef50_Q1PYT5 Cluster: Predicted orf; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Predicted orf - Candidatus Kuenenia
stuttgartiensis
Length = 128
Score = 36.3 bits (80), Expect = 0.81
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +2
Query: 107 NKVWCVYIL-RQDNGKLYTGITSNLNRRIKQHSNKQ 211
+K++ +YI+ ++N LYTG+T+NL RR+ H K+
Sbjct: 50 DKLYSIYIMTNKNNTVLYTGVTNNLKRRVYWHREKR 85
>UniRef50_A3WNM7 Cluster: Predicted endonuclease containing a URI
domain; n=1; Idiomarina baltica OS145|Rep: Predicted
endonuclease containing a URI domain - Idiomarina
baltica OS145
Length = 101
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK 208
W VY++ + LYTG+T+ L RRI+QH+ +
Sbjct: 22 WYVYMVECGDRSLYTGVTTCLERRIRQHNGE 52
>UniRef50_A0NJ82 Cluster: Methyltransferase; n=2; Oenococcus
oeni|Rep: Methyltransferase - Oenococcus oeni ATCC
BAA-1163
Length = 346
Score = 36.3 bits (80), Expect = 0.81
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 98 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATN--LRLVF 256
L+ NK + Y+++ + LY G + ++NRR H K+GAK R A L+LV+
Sbjct: 262 LHDNKYF-FYVIQTADNYLYAGTSDDVNRRFATHQAKKGAKFTRAAIRHPLKLVY 315
>UniRef50_Q84LK0 Cluster: DNA mismatch repair protein; n=7; core
eudicotyledons|Rep: DNA mismatch repair protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1118
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 119 CVYILRQDNGKLYTGITSNLNRRIKQHSNKQG 214
CVY++R+ + +LY G T +L RI+ H K+G
Sbjct: 1026 CVYVMRRPDKRLYIGQTDDLEGRIRAHRAKEG 1057
>UniRef50_Q4L3E5 Cluster: UPF0213 protein SH2523; n=25; cellular
organisms|Rep: UPF0213 protein SH2523 - Staphylococcus
haemolyticus (strain JCSC1435)
Length = 82
Score = 36.3 bits (80), Expect = 0.81
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
VYI++ + LYTG T+N+ RI H+ +GAK + + LV+
Sbjct: 6 VYIVKCKDNSLYTGYTTNVEARIATHNAGKGAKYTKTRRPVVLVY 50
>UniRef50_Q9YMP0 Cluster: LdOrf-87 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-87 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 113
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/28 (64%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 404 NLDVPYYRLGNH-EKVEYIPLKLALNDD 484
+LDVPY +L KV YIPLKLAL DD
Sbjct: 9 SLDVPYEQLNERPSKVMYIPLKLALRDD 36
>UniRef50_Q0IKZ8 Cluster: ORF121; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF121 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 159
Score = 35.9 bits (79), Expect = 1.1
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQH 199
+++ +YI+R LYTG+++N+ RR++QH
Sbjct: 57 RLYALYIIRTSKNTLYTGVSTNVVRRLQQH 86
>UniRef50_Q2S0D1 Cluster: GIY-YIG catalytic domain, putative; n=3;
cellular organisms|Rep: GIY-YIG catalytic domain,
putative - Salinibacter ruber (strain DSM 13855)
Length = 100
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 253
VY++ +G YTG T+++ RR+++H+ AK R + LV
Sbjct: 17 VYVIECRDGTYYTGYTTDVERRVEEHNEGTAAKYTRGRRPVTLV 60
>UniRef50_A7NLC7 Cluster: Excinuclease ABC C subunit domain protein;
n=14; Bacteria|Rep: Excinuclease ABC C subunit domain
protein - Roseiflexus castenholzii DSM 13941
Length = 107
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 122 VYILRQDNGK-LYTGITSNLNRRIKQHSNK 208
VYIL N K +Y G+T+NL RRI +H NK
Sbjct: 8 VYILTNWNNKVMYIGMTNNLERRIYEHKNK 37
>UniRef50_Q15PT6 Cluster: Excinuclease ABC, C subunit-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: Excinuclease ABC, C
subunit-like - Pseudoalteromonas atlantica (strain T6c /
BAA-1087)
Length = 159
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVF 256
W +YI+ YTGI +L++R QH S + AK LR L++++
Sbjct: 59 WFLYIIENKYQHYYTGICKDLSKRFAQHNSSGRLCAKALRGKGPLKMIY 107
>UniRef50_Q51440 Cluster: UPF0213 protein in ldhD 5'region; n=3;
Lactobacillales|Rep: UPF0213 protein in ldhD 5'region -
Pediococcus acidilactici
Length = 98
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 125 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
Y+L + LYTG T NL +R+ +H++ QGAK R
Sbjct: 12 YVLWCADQTLYTGYTVNLKQRVARHNSGQGAKYTR 46
>UniRef50_Q97PR7 Cluster: UPF0213 protein SP_1535; n=73;
Bacilli|Rep: UPF0213 protein SP_1535 - Streptococcus
pneumoniae
Length = 99
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
+Y+L +G Y G T+++ RR+ H++ +GAK R ++L++
Sbjct: 7 MYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIY 51
>UniRef50_Q81W06 Cluster: UPF0213 protein BA_0032/GBAA0032/BAS0034;
n=9; Bacillus|Rep: UPF0213 protein
BA_0032/GBAA0032/BAS0034 - Bacillus anthracis
Length = 96
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 119 CVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
C Y++ +G Y G T+++ +RI H++ +GAK R
Sbjct: 7 CFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTR 43
>UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34;
Nucleopolyhedrovirus|Rep: Structural glycoprotein gp41 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 409
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +3
Query: 3 YNKDXXXXXXXXXPNVTRPNTKGRT 77
YNKD PN TRPNTKGRT
Sbjct: 384 YNKDANAIIAAAAPNATRPNTKGRT 408
>UniRef50_Q62LB3 Cluster: Endo/excinuclease domain protein; n=20;
Betaproteobacteria|Rep: Endo/excinuclease domain protein
- Burkholderia mallei (Pseudomonas mallei)
Length = 298
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
W +Y++ +G +YTGIT+++ R +H+ GA+ R
Sbjct: 3 WYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTR 40
>UniRef50_Q2G9S1 Cluster: Excinuclease ABC, C subunit-like protein;
n=2; Novosphingobium aromaticivorans DSM 12444|Rep:
Excinuclease ABC, C subunit-like protein -
Novosphingobium aromaticivorans (strain DSM 12444)
Length = 118
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTAR 265
W + + G +Y G+TS+L RR+ QH G+ + + RLV+ R
Sbjct: 16 WVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRLVYAER 65
>UniRef50_O31414 Cluster: UPF0213 protein yazA; n=4; Bacillus|Rep:
UPF0213 protein yazA - Bacillus subtilis
Length = 99
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +2
Query: 125 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
Y+++ + Y G T++L++R+K H++ +GAK + + L+F
Sbjct: 9 YVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVELIF 52
>UniRef50_Q30TF2 Cluster: Excinuclease ABC, C subunit-like; n=2;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 79
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 128 ILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVF 256
+L+ + LYTGIT +L+RR+ +H S+++ AK R L +++
Sbjct: 1 MLKCSDDTLYTGITIDLSRRLNEHNSSQKAAKYTRTRRPLEMIY 44
>UniRef50_A1RI21 Cluster: Excinuclease ABC, C subunit domain
protein; n=8; Bacteria|Rep: Excinuclease ABC, C subunit
domain protein - Shewanella sp. (strain W3-18-1)
Length = 102
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 122 VYILR-QDNGKLYTGITSNLNRRIKQHSN 205
VYI+ Q NG LY G+TS L +R+ QH N
Sbjct: 5 VYIMASQFNGTLYIGVTSQLEQRVWQHKN 33
>UniRef50_Q8RIL3 Cluster: UPF0213 protein FN1575; n=3; Fusobacterium
nucleatum|Rep: UPF0213 protein FN1575 - Fusobacterium
nucleatum subsp. nucleatum
Length = 100
Score = 34.3 bits (75), Expect = 3.3
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAK 220
+Y+LR ++G +YTG+ + +R ++H + +GAK
Sbjct: 5 LYMLRCEDGSIYTGVAKDYLKRYEEHLSAKGAK 37
>UniRef50_Q5WYF4 Cluster: Putative uncharacterized protein; n=3;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 93
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKC 223
VYIL+ + YTG T NL +R+ QH +K C
Sbjct: 4 VYILQCSDKSYYTGQTDNLEKRLTQHQDKMIPGC 37
>UniRef50_Q39DX9 Cluster: Excinuclease ABC, C subunit-like; n=9;
Burkholderiaceae|Rep: Excinuclease ABC, C subunit-like -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 289
Score = 33.9 bits (74), Expect = 4.3
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRN 232
W +Y++ + +YTGIT+++ R +H++ +GA+ R+
Sbjct: 3 WFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRS 41
>UniRef50_A4JGU7 Cluster: Excinuclease ABC, C subunit domain
protein; n=1; Burkholderia vietnamiensis G4|Rep:
Excinuclease ABC, C subunit domain protein -
Burkholderia vietnamiensis (strain G4 / LMG 22486)
(Burkholderiacepacia (strain R1808))
Length = 261
Score = 33.9 bits (74), Expect = 4.3
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRN 232
W +Y++ + +YTGIT+++ R +H++ +GA+ R+
Sbjct: 3 WFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRS 41
>UniRef50_A3J1S6 Cluster: Predicted endonuclease containing a URI
domain; n=2; Flavobacteriales|Rep: Predicted
endonuclease containing a URI domain - Flavobacteria
bacterium BAL38
Length = 101
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQHS 202
K++ VYIL+ + YTGIT+++ RR+ +H+
Sbjct: 2 KLFYVYILKCKDDSFYTGITNSIERRLYEHN 32
>UniRef50_A4G800 Cluster: Putative uncharacterized protein; n=3;
Burkholderiales|Rep: Putative uncharacterized protein -
Herminiimonas arsenicoxydans
Length = 100
Score = 33.5 bits (73), Expect = 5.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 253
W +Y+L +G +YTGI ++ R H +GA+ R+ RL+
Sbjct: 3 WFLYLLECRDGSIYTGIAVDVAARYAAHEKGKGARYTRSHPPRRLL 48
>UniRef50_A1G1C7 Cluster: Excinuclease ABC, C subunit-like; n=2;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Stenotrophomonas maltophilia R551-3
Length = 174
Score = 33.5 bits (73), Expect = 5.7
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +2
Query: 74 HCIIMATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 253
H MA++L + W +Y+L +G Y GI+++++ R H +GA+ R LR++
Sbjct: 83 HNPAMASSL---RPWFLYLLECRDGSYYAGISTDVDARFAAHQAGKGARYTRARPPLRVL 139
>UniRef50_Q9FHS4 Cluster: Emb|CAB76036.1; n=1; Arabidopsis
thaliana|Rep: Emb|CAB76036.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 170
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +2
Query: 107 NKVWCVYILRQDNG--KLYTGITSNLNRRIKQHSN--KQGAK 220
+K W VY++ K Y GIT++ +RR+KQH+ + GAK
Sbjct: 51 SKSWSVYLILSTTEPIKTYVGITTDFSRRLKQHNGEIRGGAK 92
>UniRef50_P95364 Cluster: UPF0213 protein in glnA 3'region; n=5;
Neisseria|Rep: UPF0213 protein in glnA 3'region -
Neisseria gonorrhoeae
Length = 91
Score = 33.5 bits (73), Expect = 5.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
W VY++ +N Y GI+ N +R+ H+ +GAK R
Sbjct: 6 WSVYLILCENSAFYCGISPNPQQRLAIHTAGKGAKYTR 43
>UniRef50_UPI0000DA3F67 Cluster: PREDICTED: hypothetical protein; n=1;
Rattus norvegicus|Rep: PREDICTED: hypothetical protein -
Rattus norvegicus
Length = 1404
Score = 33.1 bits (72), Expect = 7.6
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 273 RTPRAVNTSRKLVALRKHLAPCLFECCFMRLLRLLVMPVYNFPLSCRRMYTHHT 112
RT +A T A+R +++PC EC F R LR L + V SC+ HT
Sbjct: 1062 RTXKAPRTCAPQGAMRLNVSPCR-ECPFPRTLRRLTLKVRCPQKSCQTQRARHT 1114
>UniRef50_Q12CT1 Cluster: Twin-arginine translocation pathway
signal; n=1; Polaromonas sp. JS666|Rep: Twin-arginine
translocation pathway signal - Polaromonas sp. (strain
JS666 / ATCC BAA-500)
Length = 764
Score = 33.1 bits (72), Expect = 7.6
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 116 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTARG-VRLQNRRP 292
WC + NG++Y +T+N NRR++ + Q A ++ N R +G V +Q P
Sbjct: 510 WCS--VNPANGEIYYSLTNNSNRRVEPSGSSQLAP---DSANPRAYSDIKGTVTVQTGNP 564
Query: 293 HG 298
HG
Sbjct: 565 HG 566
>UniRef50_Q0LV83 Cluster: Excinuclease ABC, C subunit-like; n=1;
Caulobacter sp. K31|Rep: Excinuclease ABC, C
subunit-like - Caulobacter sp. K31
Length = 122
Score = 33.1 bits (72), Expect = 7.6
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 122 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVF 256
VYIL + G LY G+TS+L+RR+ +H G+ R RLV+
Sbjct: 32 VYILASKPYGTLYIGVTSDLSRRVWEHREGLGSLFCRKYGVHRLVY 77
>UniRef50_Q0LU34 Cluster: Excinuclease ABC, C subunit-like; n=4;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Caulobacter sp. K31
Length = 106
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 122 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
VYI+ Q NG LY G T +L RR+ +H G++ R
Sbjct: 16 VYIVASQRNGTLYIGSTDDLQRRVWEHKEADGSRFTR 52
>UniRef50_A5VJC3 Cluster: Excinuclease ABC, C subunit domain
protein; n=6; Lactobacillales|Rep: Excinuclease ABC, C
subunit domain protein - Lactobacillus reuteri F275
Length = 96
Score = 33.1 bits (72), Expect = 7.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 229
+Y+L + Y G T+N+ RR H QGAK R
Sbjct: 8 IYVLYCADNSFYCGFTNNVKRRFHTHQTYQGAKYTR 43
>UniRef50_A5VFF5 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Alphaproteobacteria|Rep: Excinuclease ABC,
C subunit domain protein - Sphingomonas wittichii RW1
Length = 99
Score = 33.1 bits (72), Expect = 7.6
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 122 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTARGVRLQN 283
VYI+ +G LY G+T++L R+ QH +G+ R +LV+ R++N
Sbjct: 9 VYIMSNGVSGTLYLGVTADLAARVYQHRIGEGSAFCREHGLTKLVYAEPHDRIEN 63
>UniRef50_A5FFT3 Cluster: Excinuclease ABC, C subunit domain
protein; n=8; Bacteria|Rep: Excinuclease ABC, C subunit
domain protein - Flavobacterium johnsoniae UW101
Length = 101
Score = 33.1 bits (72), Expect = 7.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 152 LYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 253
+Y G+TSNL +RI +H NK+ K NL ++
Sbjct: 17 VYVGVTSNLPKRILEHKNKKYPKSFSAKYNLNIL 50
>UniRef50_A0W851 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Geobacter lovleyi SZ
Length = 151
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 122 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVFTARGVRL 277
+YIL +G YTG T NL +R+ +H GA+ ++L++ R+
Sbjct: 4 MYILECADGSYYTGSTWNLEKRLWEHQQGIGARHTAKRLPVKLLYCEEYARI 55
>UniRef50_Q0UAL6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 33.1 bits (72), Expect = 7.6
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 116 WCVYILRQDNGK-LYTGITSNLNRRIKQH--SNKQGAK 220
+C Y+LR N K Y G T N RR+ QH S+K GAK
Sbjct: 16 YCCYLLRSKNRKSYYIGSTPNPARRLGQHNGSSKGGAK 53
>UniRef50_UPI00003839BD Cluster: COG2827: Predicted endonuclease
containing a URI domain; n=1; Magnetospirillum
magnetotacticum MS-1|Rep: COG2827: Predicted
endonuclease containing a URI domain - Magnetospirillum
magnetotacticum MS-1
Length = 82
Score = 32.7 bits (71), Expect = 10.0
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRL 250
K W VY+L YTGI ++ R+ +H+ +GAK R RL
Sbjct: 2 KDWFVYVLLNGAHIAYTGIALDVEDRLARHNAGEGAKFTRGRGPWRL 48
>UniRef50_Q186F2 Cluster: Putative endonuclease; n=1; Clostridium
difficile 630|Rep: Putative endonuclease - Clostridium
difficile (strain 630)
Length = 103
Score = 32.7 bits (71), Expect = 10.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 113 VWCVYILRQDNGKLYTGITSNLNRRIKQH 199
++ YI+R + LYTG TSN+ RR+ +H
Sbjct: 1 MYFTYIIRCKDDSLYTGYTSNIVRRMNEH 29
>UniRef50_Q9CEL6 Cluster: UPF0213 protein ysiG; n=3; Lactococcus
lactis|Rep: UPF0213 protein ysiG - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 104
Score = 32.7 bits (71), Expect = 10.0
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 125 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 253
YIL+ + LY G T++L +R+ H++ +GAK + ++L+
Sbjct: 7 YILQCSDKTLYCGYTTDLEKRLATHNSGKGAKYTKTRLPVKLL 49
>UniRef50_Q88VJ1 Cluster: UPF0213 protein lp_2058; n=6;
Lactobacillus|Rep: UPF0213 protein lp_2058 -
Lactobacillus plantarum
Length = 101
Score = 32.7 bits (71), Expect = 10.0
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 110 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKC--LRNATNLRLVF 256
K + Y+L + LY G T NL RR+ H+ +GAK +R+ L+L++
Sbjct: 15 KKYYFYVLLCADQTLYGGFTDNLQRRLATHNAGKGAKYTRVRSRRPLQLIY 65
>UniRef50_Q8EZM8 Cluster: 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase (EC 2.7.1.148) (CMK)
(4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
kinase); n=4; Leptospira|Rep:
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC
2.7.1.148) (CMK)
(4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
kinase) - Leptospira interrogans
Length = 297
Score = 32.7 bits (71), Expect = 10.0
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 395 VNMNLDVPYYRLGNHEKVEYIPLKLALNDDITSEP 499
+N+ L++P+ RL ++ + LK++ DDI EP
Sbjct: 7 INLGLEIPFKRLDGFHEIRSVFLKISWGDDIEIEP 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,032,431
Number of Sequences: 1657284
Number of extensions: 11639846
Number of successful extensions: 33717
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 32423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33680
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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