Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120292X.Seq
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   1.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.3  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.1  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   3.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.5  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 454 KDGVIDLGLIFIGRLFSYPLTKRVFALTLYVGGCSVSNLN 335
           K+G++  GLI     F+  LT  +F L +YV  C  +N N
Sbjct: 131 KNGIVFAGLIVFILFFAQGLTSPIFNL-VYVYCCD-NNFN 168


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 297 IMPSKTNAVIIYPFKLDTEHPPTYN 371
           + P+  NA++  P  + TE    YN
Sbjct: 454 VFPNTNNAIMTPPASVQTESSDNYN 478


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 297 IMPSKTNAVIIYPFKLDTEHPPTYN 371
           + P+  NA++  P  + TE    YN
Sbjct: 402 VFPNTNNAIMTPPASVQTESSDNYN 426


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 544 PAQCTCCT*IHLIKAGARMQLITYAPRVPFK 452
           P QC  C  +   K+  +M   T+    PFK
Sbjct: 134 PNQCVICHRVLSCKSALQMHYRTHTGERPFK 164


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 139 PTPSRASFDNGYSEFCDKQQPNDYL 65
           P P +   D    E CDK+ P  Y+
Sbjct: 102 PEPEKFDPDRFLPENCDKRHPYAYI 126


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 139 PTPSRASFDNGYSEFCDKQQPNDYLNYYNNP 47
           P P +   D    E C K+ P  YL +   P
Sbjct: 418 PDPEKFDPDRFLPENCQKRHPFAYLPFSAGP 448


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 139 PTPSRASFDNGYSEFCDKQQPNDYLNYYNNP 47
           P P +   D    E C K+ P  YL +   P
Sbjct: 418 PDPEKFDPDRFLPENCQKRHPFAYLPFSAGP 448


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 413 SADKY*SEVDNTVLERDTRSVRDQLHSRAGLYEMYLRTTS 532
           S   Y     +T+   +T SV +   S + ++  Y+RTTS
Sbjct: 32  STSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTS 71


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 413 SADKY*SEVDNTVLERDTRSVRDQLHSRAGLYEMYLRTTS 532
           S   Y     +T+   +T SV +   S + ++  Y+RTTS
Sbjct: 32  STSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTS 71


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 235 LFQLQVDIGGDTIVNNQTT 179
           +FQ  +D+GG+ I  ++ T
Sbjct: 237 IFQEVIDLGGEAISKHEYT 255


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 235 LFQLQVDIGGDTIVNNQTT 179
           +FQ  +D+GG+ I  ++ T
Sbjct: 238 IFQEVIDLGGEAISKHEYT 256


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 235 LFQLQVDIGGDTIVNNQTT 179
           +FQ  +D+GG+ I  ++ T
Sbjct: 238 IFQEVIDLGGEAISKHEYT 256


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +1

Query: 25  PCRLHPAWDCYNNSNSR 75
           P R HP W+   N   R
Sbjct: 349 PSRSHPVWEIVMNELDR 365


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +1

Query: 25  PCRLHPAWDCYNNSNSR 75
           P R HP W+   N   R
Sbjct: 356 PSRSHPVWEIVMNELDR 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,449
Number of Sequences: 336
Number of extensions: 2638
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)