Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120291.Seq
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB...    29   6.2  
AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA...    29   6.2  
BT011485-1|AAR99143.1|  250|Drosophila melanogaster LD21093p pro...    29   8.3  
AE014134-1846|AAN10746.2|  305|Drosophila melanogaster CG5025-PB...    29   8.3  

>AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB,
           isoform B protein.
          Length = 2347

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 659 HKQSCKCGTFCLCAKPLKPKAQGPLRAC 742
           H ++CKC T  +   PL+P+  G    C
Sbjct: 555 HNENCKCITCSIAGTPLRPRQAGHCAKC 582


>AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA,
           isoform A protein.
          Length = 2451

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 659 HKQSCKCGTFCLCAKPLKPKAQGPLRAC 742
           H ++CKC T  +   PL+P+  G    C
Sbjct: 555 HNENCKCITCSIAGTPLRPRQAGHCAKC 582


>BT011485-1|AAR99143.1|  250|Drosophila melanogaster LD21093p
           protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +3

Query: 573 SAAFARRPLSRFIYIQQVHCAVGICGNAHTSRAASVAHFVCAQNL*SQKHKVRY 734
           S  +  +  +  ++  Q HCA  I G      A ++A F   ++L   KHKV +
Sbjct: 181 SMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKHLGGPKHKVSF 234


>AE014134-1846|AAN10746.2|  305|Drosophila melanogaster CG5025-PB,
           isoform B protein.
          Length = 305

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +3

Query: 573 SAAFARRPLSRFIYIQQVHCAVGICGNAHTSRAASVAHFVCAQNL*SQKHKVRY 734
           S  +  +  +  ++  Q HCA  I G      A ++A F   ++L   KHKV +
Sbjct: 236 SMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKHLGGPKHKVSF 289


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,064,586
Number of Sequences: 53049
Number of extensions: 790551
Number of successful extensions: 2192
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2192
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)