Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120291.Seq
         (864 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   2.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   2.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.6  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   8.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   8.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   8.4  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = -3

Query: 229 TPSRASFDNGYSEFCDKQQPNDYLNYYNNPTPDGADTVVSDSETAAA 89
           +P+ AS ++  S         +Y   +N+P+P G+    S S  + +
Sbjct: 33  SPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTS 79


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 571 DQLHSRAGLYRDLFTYNKYTAPLGFV 648
           D LHSR  +YRDL   N      G+V
Sbjct: 480 DYLHSRNIIYRDLKPENLLLDSQGYV 505


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 421 MITALVLEGIIKKILLSCSPLGQYKLTFMLN 329
           ++TAL+  G +KK  L  S +   K+  M N
Sbjct: 336 LVTALIQRGTLKKGCLLVSGIASAKVRSMFN 366


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 620 TSTLRRWDLW*RAHKQSCKCGTFCLCAKPLKPK 718
           T  + RW  W     + CK  T    ++ ++PK
Sbjct: 382 TDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPK 414


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 620 TSTLRRWDLW*RAHKQSCKCGTFCLCAKPLKPK 718
           T  + RW  W     + CK  T    ++ ++PK
Sbjct: 382 TDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPK 414


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 620 TSTLRRWDLW*RAHKQSCKCGTFCLCAKPLKPK 718
           T  + RW  W     + CK  T    ++ ++PK
Sbjct: 382 TDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPK 414


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -3

Query: 583 NAADHVRSSCPVQGRCYRPQINIYRRLFSYPLTKRVFAL 467
           N A H R SC    + Y    N    + SY + K  F L
Sbjct: 80  NTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNL 118


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -3

Query: 583 NAADHVRSSCPVQGRCYRPQINIYRRLFSYPLTKRVFAL 467
           N A H R SC    + Y    N    + SY + K  F L
Sbjct: 85  NTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNL 123


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -3

Query: 583 NAADHVRSSCPVQGRCYRPQINIYRRLFSYPLTKRVFAL 467
           N A H R SC    + Y    N    + SY + K  F L
Sbjct: 85  NTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNL 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,065
Number of Sequences: 438
Number of extensions: 4903
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)