Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120290.Seq
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   7.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   7.0  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   7.0  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   7.0  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   7.0  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 181 RRFGHCYCP 155
           ++F HCYCP
Sbjct: 420 QQFFHCYCP 428


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 217 ALNPRSYSKNLLQDLGVLSATNTQTTIKIEPILQ*RNLQRLYPRRQ-----MLKSL*RQR 381
           ALN  + S+    +LG +    T    K+  +LQ  +++ +Y   +      + SL R  
Sbjct: 221 ALNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKSHDPFIASLVRPH 280

Query: 382 SPVEPRLPQ 408
            PV  + P+
Sbjct: 281 GPVIEKKPE 289


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 217 ALNPRSYSKNLLQDLGVLSATNTQTTIKIEPILQ*RNLQRLYPRRQ-----MLKSL*RQR 381
           ALN  + S+    +LG +    T    K+  +LQ  +++ +Y   +      + SL R  
Sbjct: 221 ALNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKVHDPFIASLVRPH 280

Query: 382 SPVEPRLPQ 408
            PV  + P+
Sbjct: 281 GPVIEKKPE 289


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 217 ALNPRSYSKNLLQDLGVLSATNTQTTIKIEPILQ*RNLQRLYPRRQ-----MLKSL*RQR 381
           ALN  + S+    +LG +    T    K+  +LQ  +++ +Y   +      + SL R  
Sbjct: 221 ALNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKVHDPFIASLVRPH 280

Query: 382 SPVEPRLPQ 408
            PV  + P+
Sbjct: 281 GPVIEKKPE 289


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 217 ALNPRSYSKNLLQDLGVLSATNTQTTIKIEPILQ*RNLQRLYPRRQ-----MLKSL*RQR 381
           ALN  + S+    +LG +    T    K+  +LQ  +++ +Y   +      + SL R  
Sbjct: 221 ALNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKVHDPFIASLVRPH 280

Query: 382 SPVEPRLPQ 408
            PV  + P+
Sbjct: 281 GPVIEKKPE 289


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 217 ALNPRSYSKNLLQDLGVLSATNTQTTIKIEPILQ*RNLQRLYPRRQ-----MLKSL*RQR 381
           ALN  + S+    +LG +    T    K+  +LQ  +++ +Y   +      + SL R  
Sbjct: 220 ALNLWARSRRYTTELGQVLGLQTTDERKVLEVLQKMSVEEMYLAAEKVHDPFIASLVRPH 279

Query: 382 SPVEPRLPQ 408
            PV  + P+
Sbjct: 280 GPVIEKKPE 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,717
Number of Sequences: 336
Number of extensions: 3520
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)