Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120290.Seq
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF137396-6|AAG41680.1|  316|Homo sapiens HOR5'Beta8 protein.           31   5.2  
AK023360-1|BAB14543.1|  696|Homo sapiens protein ( Homo sapiens ...    30   9.1  

>AF137396-6|AAG41680.1|  316|Homo sapiens HOR5'Beta8 protein.
          Length = 316

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 640 YGQLVQALIRAVLGFGRRRCRNTTGDHADALFEFRTRFIGL 518
           YG ++  ++    G GR++  NT G H  A+  +    IGL
Sbjct: 220 YGLILHTVLGIATGEGRKKALNTCGSHVCAVLAYYVPMIGL 260


>AK023360-1|BAB14543.1|  696|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13298 fis, clone OVARC1001306, weakly similar to
           N-MYC PROTO-ONCOGENE PROTEIN. ).
          Length = 696

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 207 EKISPKPEKLFEESAARFRSIIGDEHTDDNQNRTDPPVTKLAETV 341
           E+I PK EK    S+A F  +  +E  +D+  +TD  + ++ + V
Sbjct: 449 EQIQPKQEKKGGRSSADFTVLDLEEDDEDDNEKTDDSIDEIVDVV 493


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,382,373
Number of Sequences: 237096
Number of extensions: 2103537
Number of successful extensions: 5560
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5560
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)