Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120290.Seq
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p pro...    33   0.64 
AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-P...    33   0.64 
AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-P...    33   0.64 
AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p pro...    31   1.5  
AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA...    31   1.5  
AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p pro...    30   3.4  

>AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p
           protein.
          Length = 731

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 638 VYMQGSKHLGARIAHSDYVDPMTLSG 715
           ++ QGS+ +G R+AH DY DP  L G
Sbjct: 575 LHRQGSEAVGERMAHVDYADPKALFG 600


>AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-PC,
           isoform C protein.
          Length = 731

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 638 VYMQGSKHLGARIAHSDYVDPMTLSG 715
           ++ QGS+ +G R+AH DY DP  L G
Sbjct: 575 LHRQGSEAVGERMAHVDYADPKALFG 600


>AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-PD,
            isoform D protein.
          Length = 1593

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 638  VYMQGSKHLGARIAHSDYVDPMTLSG 715
            ++ QGS+ +G R+AH DY DP  L G
Sbjct: 1437 LHRQGSEAVGERMAHVDYADPKALFG 1462


>AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p
           protein.
          Length = 1242

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 23/97 (23%), Positives = 40/97 (41%)
 Frame = +2

Query: 263 EYYRRRTHRRQSK*NRSSSDETCRDCTHDDRC*SRYNDNDRQWSHVYRSHRCTEQERL*A 442
           E   R  H+R+S+   +      R+  H DR  SR  D +R+     R +R   + R   
Sbjct: 168 EVSSRDRHKRRSRDRDTKRRSRSREDRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDR 227

Query: 443 DIDEPKSKRQEQSRSSFV*LRKIPRKPDKSRPKFEKS 553
           D D  +  +   SR      R+   +  + R + ++S
Sbjct: 228 DRDRDRRHKSSSSRDHHERRRRSRSRSTERRDRRDRS 264


>AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA
           protein.
          Length = 1242

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 23/97 (23%), Positives = 40/97 (41%)
 Frame = +2

Query: 263 EYYRRRTHRRQSK*NRSSSDETCRDCTHDDRC*SRYNDNDRQWSHVYRSHRCTEQERL*A 442
           E   R  H+R+S+   +      R+  H DR  SR  D +R+     R +R   + R   
Sbjct: 168 EVSSRDRHKRRSRDRDTKRRSRSREDRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDR 227

Query: 443 DIDEPKSKRQEQSRSSFV*LRKIPRKPDKSRPKFEKS 553
           D D  +  +   SR      R+   +  + R + ++S
Sbjct: 228 DRDRDRRHKSSSSRDHHERRRRSRSRSTERRDRRDRS 264


>AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p protein.
          Length = 1240

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 638  VYMQGSKHLGARIAHSDYVDPMTLSG 715
            ++ QGS+ +  R+AH DY DP  L G
Sbjct: 1081 LHRQGSEAVSERMAHVDYADPKALFG 1106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,179,842
Number of Sequences: 53049
Number of extensions: 686286
Number of successful extensions: 2142
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2141
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)