Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120290.Seq
         (840 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66567-1|CAA91491.1|  887|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z92790-2|CAB07224.2|  377|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z66567-1|CAA91491.1|  887|Caenorhabditis elegans Hypothetical
           protein ZK455.1 protein.
          Length = 887

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 613 LSKLEQAARIHAGQ*APRRENSSFGLRRSNDAI 711
           +SK   AAR  AG+    R+ +++G RR ND I
Sbjct: 684 ISKTSPAARFLAGRGVTPRDFNTYGARRGNDEI 716


>Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical
           protein F01D5.1 protein.
          Length = 178

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 139 YSGSCF*ICLRHSSKTVYC*RACRFCVPG 53
           Y   CF  C   S +  YC ++C FC PG
Sbjct: 133 YCNKCFYKC---SEREKYCAKSCGFCTPG 158


>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 443  DIDEPKSKRQEQSRSSFV*L--RKIPRK--PDKSRPKFEKS 553
            D+DEPK KR++Q     + L  R +P K  P+KS  +FEK+
Sbjct: 4098 DMDEPKRKRKDQKDQKDIKLIARVLPMKKTPEKS-DRFEKA 4137


>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 443  DIDEPKSKRQEQSRSSFV*L--RKIPRK--PDKSRPKFEKS 553
            D+DEPK KR++Q     + L  R +P K  P+KS  +FEK+
Sbjct: 4087 DMDEPKRKRKDQKDQKDIKLIARVLPMKKTPEKS-DRFEKA 4126


>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 443  DIDEPKSKRQEQSRSSFV*L--RKIPRK--PDKSRPKFEKS 553
            D+DEPK KR++Q     + L  R +P K  P+KS  +FEK+
Sbjct: 4087 DMDEPKRKRKDQKDQKDIKLIARVLPMKKTPEKS-DRFEKA 4126


>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 443  DIDEPKSKRQEQSRSSFV*L--RKIPRK--PDKSRPKFEKS 553
            D+DEPK KR++Q     + L  R +P K  P+KS  +FEK+
Sbjct: 4098 DMDEPKRKRKDQKDQKDIKLIARVLPMKKTPEKS-DRFEKA 4137


>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 443  DIDEPKSKRQEQSRSSFV*L--RKIPRK--PDKSRPKFEKS 553
            D+DEPK KR++Q     + L  R +P K  P+KS  +FEK+
Sbjct: 4087 DMDEPKRKRKDQKDQKDIKLIARVLPMKKTPEKS-DRFEKA 4126


>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 443  DIDEPKSKRQEQSRSSFV*L--RKIPRK--PDKSRPKFEKS 553
            D+DEPK KR++Q     + L  R +P K  P+KS  +FEK+
Sbjct: 4087 DMDEPKRKRKDQKDQKDIKLIARVLPMKKTPEKS-DRFEKA 4126


>Z92790-2|CAB07224.2|  377|Caenorhabditis elegans Hypothetical
           protein H03G16.2 protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 353 CRRGYSLCKFRHWRIGSILIVVCV 282
           C++G  + +FRHW    + + VC+
Sbjct: 112 CQQGDGIVRFRHWTSPGVKVRVCI 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,549,419
Number of Sequences: 27780
Number of extensions: 353212
Number of successful extensions: 1131
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)