Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120289.Seq
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 40 0.003
07_03_1576 - 27862043-27862129,27862935-27862988,27863042-278632... 36 0.026
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 36 0.035
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 36 0.035
05_05_0173 + 22956927-22958615 34 0.14
01_06_1720 + 39421381-39421444,39422424-39422601,39422812-394229... 34 0.14
07_01_1116 + 10308029-10308111,10308575-10308737,10308996-103090... 33 0.24
12_02_0989 - 25069052-25070134 32 0.43
06_03_0347 + 19783824-19784348 32 0.43
02_02_0266 - 8410533-8411066 32 0.43
08_02_0839 + 21693348-21694853 32 0.56
12_02_0132 - 14054331-14054969 31 0.74
09_04_0457 - 17736158-17737336 31 0.98
08_02_1449 - 27174451-27178005 31 0.98
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 31 0.98
08_01_0413 - 3679887-3681254 30 1.7
06_03_0340 + 19703574-19704329 30 1.7
06_03_0338 - 19685656-19686282 30 2.3
02_05_1026 - 33598275-33599561 30 2.3
02_02_0267 - 8416184-8416684 30 2.3
01_01_0793 - 6182125-6182625 29 3.0
06_01_0396 - 2847739-2848332 29 4.0
04_04_1151 - 31284094-31284204,31284375-31284434,31284518-312845... 29 4.0
02_05_1341 - 35801987-35802472 29 4.0
02_02_0372 + 9522751-9522964,9523043-9523255,9523471-9523555,952... 29 5.2
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 29 5.2
01_06_0829 - 32270189-32270863 29 5.2
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 28 6.9
03_02_0715 + 10621789-10623243,10624074-10625018 28 6.9
02_04_0346 - 22183145-22183264,22183877-22183966,22184140-221842... 28 6.9
02_02_0256 - 8362374-8363003 28 6.9
12_01_1035 + 10656345-10656347,10656694-10656864,10656922-106577... 28 9.2
07_03_0161 - 14560287-14560426,14560467-14560707 28 9.2
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 28 9.2
03_05_0513 - 25073518-25073623,25073719-25073777,25074048-250741... 28 9.2
03_02_0799 - 11330254-11330319,11330359-11330505 28 9.2
01_01_0454 + 3375593-3376105 28 9.2
>04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRT 487
EC +C E ++D+ L P C + +C C ++ W+T + CP CR+
Sbjct: 895 ECPICLESASDDPVLTP---CAHRMCRECLLSSWRT-PSGGPCPLCRS 938
>07_03_1576 -
27862043-27862129,27862935-27862988,27863042-27863243,
27865015-27865249,27865338-27865404,27865489-27865639,
27866898-27866957,27867402-27867466
Length = 306
Score = 36.3 bits (80), Expect = 0.026
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = +2
Query: 272 IEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKT 451
IE+ ++ K++ +D+++ EC +C EI + + + P C +A+C C W++
Sbjct: 141 IERYRRRDEDQKMVISEIDDNIEEECGICMEI--NGKVVLP--TCSHAMC-IKCYRDWRS 195
Query: 452 ATTHAKCPACRTSYK*ARNQNEW 520
+ CP CR S K + + W
Sbjct: 196 RS--QSCPFCRDSLKRVNSADLW 216
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 347 CNVCKE-ISTDERFLKPKECCEYAICNAC---CVTMWKTATTHAKCPACRTSY 493
C +C E + ++ LKP +C Y IC C + M + T +CPACRT Y
Sbjct: 11 CPLCAEDMDITDQQLKPCKC-GYEICVWCWHHIIDMAEKEDTEGRCPACRTRY 62
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 347 CNVCKE-ISTDERFLKPKECCEYAICNAC---CVTMWKTATTHAKCPACRTSY 493
C +C E + ++ LKP +C Y IC C + M + T +CPACRT Y
Sbjct: 68 CPLCAEDMDITDQQLKPCKC-GYEICVWCWHHIIDMAEKEDTEGRCPACRTRY 119
>05_05_0173 + 22956927-22958615
Length = 562
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 338 LYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 484
++ECN+C E++++ C + C C +TH +CP C+
Sbjct: 235 MFECNICFEMASEPVVTS----CGHLFCWPCLYQWLHVHSTHKECPVCK 279
>01_06_1720 +
39421381-39421444,39422424-39422601,39422812-39422980,
39423101-39423170,39423259-39423487,39425130-39425340
Length = 306
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSYK*ARNQNEW 520
EC +C E T + + P C +A+C C W T + CP CR S K R+++ W
Sbjct: 209 ECGICLETCT--KMVLPN--CNHAMC-INCYRDWYTRSQ--SCPFCRGSLKRVRSRDLW 260
>07_01_1116 +
10308029-10308111,10308575-10308737,10308996-10309062,
10309120-10309375,10309658-10309781,10310039-10310077
Length = 243
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSYK*ARNQNEW 520
EC +C E T + + P C +A+C C ++ + + CP CR S K R+++ W
Sbjct: 162 ECGICMETCT--KMVLPN--CSHAMCIKCYRDWYRRSES---CPFCRGSLKRIRSRDLW 213
>12_02_0989 - 25069052-25070134
Length = 360
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 490
+C VC D L+ C +A +A C+ +W A HA CP CR +
Sbjct: 103 DCAVCLLEFADGDELRALPLCAHAF-HADCIDVWLRA--HASCPLCRAA 148
>06_03_0347 + 19783824-19784348
Length = 174
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRT 487
EC+VC ++ C++ + + C+ MW +HA CP CRT
Sbjct: 101 ECSVCLGAVQGGEAVRRLPACKH-LYHVECIDMW--LASHATCPICRT 145
>02_02_0266 - 8410533-8411066
Length = 177
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 490
+C VC I + ++ C++ + + C+ MW +H+ CP CR S
Sbjct: 115 QCAVCLSIVQEGETVRQLPACKH-LFHVGCIDMW--LHSHSTCPLCRAS 160
>08_02_0839 + 21693348-21694853
Length = 501
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 341 YECNVCK-EISTDERF-LKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 490
++C VC E + D+R L PK C +A + C+ W +H+ CP CR S
Sbjct: 151 FDCAVCLCEFADDDRLRLLPK--CSHAF-HVDCIDTW--LLSHSTCPLCRRS 197
>12_02_0132 - 14054331-14054969
Length = 212
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSYK 496
+C VC + ++ C +A +A C+ W A HA CP CR K
Sbjct: 154 QCAVCIGVVRRGETVRRLPACGHAF-HAACIDGWLRA--HATCPVCRADVK 201
>09_04_0457 - 17736158-17737336
Length = 392
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 490
EC VC D+ L+ C + + + C+ W +HA CP CR +
Sbjct: 124 ECAVCISEFDDDETLRLLPKCSH-VFHQDCIDTW--LASHATCPVCRAN 169
>08_02_1449 - 27174451-27178005
Length = 1184
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 651 CNSNSCE*MPSALKEHVHYLLNQNSWSKINI*NDLFPE 538
CN S E P K H+HYL N W + + +FPE
Sbjct: 838 CNG-SLEIFPKLKKMHLHYLPNLEKWMDNEVTSVMFPE 874
>02_01_0471 -
3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = -3
Query: 450 VFHMVTQHALHIAYSQHSFG---FKNLSSVDISLQTLHSYKTELSTNKFITLTVLLIVSS 280
+ H +T HAL SQH+ F+++ +++ L L ++LS +K+ + + S
Sbjct: 298 LLHFITLHALRSTISQHARAQNHFRSIGGLEVLLDGLGLPSSKLSVSKY---SFVPSDES 354
Query: 279 F-SINNRQFVLTRSR 238
F ++NN QF+ R
Sbjct: 355 FGNVNNLQFLCENGR 369
>08_01_0413 - 3679887-3681254
Length = 455
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 341 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 484
+ECN+C E S + + P C + C C + H+ CP C+
Sbjct: 239 FECNICFE-SAKDPVVTP---CGHLFCWPCIYQWLHGHSEHSDCPVCK 282
>06_03_0340 + 19703574-19704329
Length = 251
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 490
+C VC + + L+ C + +A C+ W TA H CP CRT+
Sbjct: 184 KCCVCLAGMREAQALRDLPRCGHRF-HAKCIGKWLTA--HPTCPVCRTT 229
>06_03_0338 - 19685656-19686282
Length = 208
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 484
+C VC E + C + + C+ MW +HA CP CR
Sbjct: 140 QCAVCLEALRGGETARRLPSCAHTF-HVACIDMW--LGSHATCPVCR 183
>02_05_1026 - 33598275-33599561
Length = 428
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 341 YECNVCK-EISTDERF-LKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 490
++C VC E + D++ L PK C +A + C+ W +H+ CP CR S
Sbjct: 121 FDCAVCLCEFAADDQLRLLPK--CSHAF-HLECIDTW--LLSHSTCPLCRRS 167
>02_02_0267 - 8416184-8416684
Length = 166
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 484
+C +C + D ++ C++ + + CV MW +HA CP CR
Sbjct: 109 QCAICLGVVRDGEAVRRLPECKH-LFHVECVDMW--LYSHATCPLCR 152
>01_01_0793 - 6182125-6182625
Length = 166
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSYK*ARNQNEWR 523
EC VC + ++ CC +A +A CV W CP CR R
Sbjct: 100 ECAVCLGAVEEGETVRALPCCPHAF-HARCVDAW--LRLRPTCPLCRADVPVPARPTAPR 156
Query: 524 RQLVDSG 544
R+ V G
Sbjct: 157 RRHVPRG 163
>06_01_0396 - 2847739-2848332
Length = 197
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 490
+C++C ++ ++ C + + +A CV W A HA CP CR +
Sbjct: 140 QCSICLGLARVGEAVRRLPSCGH-LFHAGCVDEWLRA--HATCPLCRAA 185
>04_04_1151 -
31284094-31284204,31284375-31284434,31284518-31284595,
31284688-31284812,31284898-31285906,31286513-31286920,
31287323-31287400,31287524-31287934
Length = 759
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Frame = -2
Query: 286 FQLFNKQQAICINSFTYICIEF-------IFLKQHAKEFLISFNAS 170
F+LF K+ +C++ Y C EF I +K K+ L+ F++S
Sbjct: 418 FELFRKEYELCMDCMAYSCGEFGSLSEYMITVKNKTKDQLVRFDSS 463
>02_05_1341 - 35801987-35802472
Length = 161
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 490
EC +C L+ C +A + C+ W THA CP+CR +
Sbjct: 75 ECAICLAEFAGGEELRLLPHCGHAF-HVSCIDTW--LGTHATCPSCRAT 120
>02_02_0372 +
9522751-9522964,9523043-9523255,9523471-9523555,
9524373-9524448,9524974-9525150,9525473-9525566,
9526357-9526466,9526568-9526657,9526752-9526832,
9528468-9529277,9530777-9530896
Length = 689
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 633 RNYLNCTFDLLDDAVLMNYFNYLQSMQLKHL 725
+NY N D L+DA L+ + YLQ +K L
Sbjct: 592 KNYSNALCDKLEDAKLVQHSRYLQLSAMKSL 622
>01_07_0383 - 43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAI--CNACCVTMWKTATTHAKCPACRTSY 493
EC +C I P+ C+ + C+ W + + + CP C+T +
Sbjct: 1851 ECPICYSILHTSNHSLPRLACKTCRHKFHGACLYKWFSTSNKSTCPLCQTPF 1902
>01_06_0829 - 32270189-32270863
Length = 224
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 341 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAK-CPACR 484
+ECN+C E++ D C + C C+ W H++ CP C+
Sbjct: 25 FECNICLELAQD----PVVTLCGHLFCWP-CLYEWLHVHAHSRECPVCK 68
>07_03_1304 - 25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 87 CIKEIEGAYGVRDRGNVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNEL 251
C+ E+E + + G+V + Q ALK CC KN Q+ V +L
Sbjct: 1527 CLCEVEDPFKLESCGHVFCLTCLVDQCESALKSHDGFPLCCLKNGCKKQLLVVDL 1581
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 347 CNVCKEISTDERFLKPK--ECCEYAICNACCVTMWKTATTHAKCPACRTSY 493
C +C +S ++R +CC + C A C+ W + ++CP C+ +
Sbjct: 413 CGIC--LSEEQRVTVQGVLDCCSHYFCFA-CIMQW--SKVESRCPLCKRRF 458
>02_04_0346 -
22183145-22183264,22183877-22183966,22184140-22184220,
22184430-22184589,22184723-22184787,22185370-22185441,
22186163-22186327
Length = 250
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 338 LYECNVCKEISTDERFLKPKECC-EYAICNACCVTMWKTATTHAKCPACRTSYK 496
+ EC +C+E + P C + CV W C C SYK
Sbjct: 29 MVECRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKGDIICEICHVSYK 82
>02_02_0256 - 8362374-8363003
Length = 209
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 344 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRT 487
EC+VC K C + + + C+ MW +HA CP CR+
Sbjct: 143 ECSVCLGEMRQGEAAKRLPVCLH-VFHEECIDMW--LGSHATCPICRS 187
>12_01_1035 +
10656345-10656347,10656694-10656864,10656922-10657728,
10657881-10659092
Length = 730
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 576 SYFDLKDNEHVPSEPMAFIRNYL-NCTFDLLDD-AVLMNYFNYLQSMQLKHL 725
S F +E +P E ++ Y+ C L+DD +LMN++N L M HL
Sbjct: 146 SSFPQTRDESIP-EAWERLQEYVATCPHHLMDDWLILMNFYNGLTPMSHDHL 196
>07_03_0161 - 14560287-14560426,14560467-14560707
Length = 126
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 484 PARWTLCV-RGGRFPHGNAARVAYSVFATFFWL 389
PA W C G P G AAR+ S + +FW+
Sbjct: 26 PAGWPRCCGAAGGPPAGPAARILTSCSSAYFWI 58
>06_01_1173 +
10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 347 CNVCKEISTDERFLKPK-ECCEYAICNACCVTMWKTATTHAKCPACRTSYK 496
C +C ++ R ++ + +CC + C C + W A ++CP C+ ++
Sbjct: 27 CGIC--LTDARRAVRGELDCCAHHFCFVC-IMAW--ARVESRCPFCKARFR 72
>03_05_0513 -
25073518-25073623,25073719-25073777,25074048-25074185,
25074719-25074982,25075062-25075306,25075874-25076081
Length = 339
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Frame = +2
Query: 308 VMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACC-----VTMW---KTATTH 463
+M + + ++ YE ++ I D F C + C C V ++ K+A
Sbjct: 218 LMTMAISETMKYEYSLTCPICLDTLFNPYALSCGHLFCKGCACGAASVYIFQGVKSAPPE 277
Query: 464 AKCPACRT 487
AKCP CR+
Sbjct: 278 AKCPVCRS 285
>03_02_0799 - 11330254-11330319,11330359-11330505
Length = 70
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 350 NVCKEISTDERFLKPKECCEYAICNAC 430
N +E+++D F+ P C++ C AC
Sbjct: 28 NAGREVNSDILFVVPDHDCDFVYCRAC 54
>01_01_0454 + 3375593-3376105
Length = 170
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 396 KNVANTLYATRAALPCGKRPPRTQSVQRAGHRINKHATKMSGGGN 530
K+ + + A R P G P T + RA + ++H +MS G +
Sbjct: 111 KSEGSAVAADRLGSPAGSASPETTRMMRAQKQQHQHRRRMSTGSH 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,242,501
Number of Sequences: 37544
Number of extensions: 411545
Number of successful extensions: 1093
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -