Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120288.Seq
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K3G5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_Q8IC29 Cluster: Putative uncharacterized protein MAL7P1...    34   4.4  
UniRef50_Q040J8 Cluster: Beta-lactamase class C or other penicil...    33   5.8  
UniRef50_UPI00015BDEAC Cluster: UPI00015BDEAC related cluster; n...    33   7.7  
UniRef50_A7JIZ6 Cluster: Predicted protein; n=3; Francisella tul...    33   7.7  
UniRef50_Q4UHA0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_A5K3G5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 795

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 17/62 (27%), Positives = 38/62 (61%)
 Frame = -2

Query: 578 INESRYNDVLFKNNVIRQTIRRRIKINVSKYINEGRYNDVLFKNNVIRQTIRKCIKIFLT 399
           +N     D+L K N +++    +++++ +KY+ EG  N+V+  NN+I++  RK + ++L 
Sbjct: 341 VNIYEKRDILKKRNDMKRLDAEKMEVSTAKYV-EGDRNEVM--NNLIKKMKRKSLVLYLI 397

Query: 398 KV 393
            +
Sbjct: 398 DI 399


>UniRef50_Q8IC29 Cluster: Putative uncharacterized protein MAL7P1.17;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL7P1.17 - Plasmodium falciparum
            (isolate 3D7)
          Length = 3535

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = -2

Query: 599  KINVSKYINESRYNDVLFKNNVIRQTIRRRIKINVSKYINEGRYNDVLFKNNV 441
            K N++++INE+  N  + +NN+ R         N++++INE   N  + +NN+
Sbjct: 2788 KKNINQHINENNINQHINENNINRHINEN----NINRHINENHINQHVNENNI 2836


>UniRef50_Q040J8 Cluster: Beta-lactamase class C or other penicillin
           binding protein; n=1; Lactobacillus gasseri ATCC
           33323|Rep: Beta-lactamase class C or other penicillin
           binding protein - Lactobacillus gasseri (strain ATCC
           33323 / DSM 20243)
          Length = 338

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 25/81 (30%), Positives = 37/81 (45%)
 Frame = -2

Query: 671 LTKVVITTCYLKITLFVKL*EK*VKINVSKYINESRYNDVLFKNNVIRQTIRRRIKINVS 492
           LTKVV  T  +   L  K+ +  +   VSKY  +  Y D+  KN ++  +       NV 
Sbjct: 62  LTKVVGVTSRILQLLGKKIID--LDDKVSKYFPQISYPDITIKNLLLHNSGLAADLSNVY 119

Query: 491 KYINEGRYNDVLFKNNVIRQT 429
            Y N+    D +FK  +I  T
Sbjct: 120 SYANKDEVIDAIFKQKLIYPT 140


>UniRef50_UPI00015BDEAC Cluster: UPI00015BDEAC related cluster; n=1;
           unknown|Rep: UPI00015BDEAC UniRef100 entry - unknown
          Length = 190

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -2

Query: 551 LFKNNVIRQTIRRRIKINVSKYINEGRYNDVLFKNNV 441
           LFK+ +IR+   + I+IN+SKY+    + DV   +NV
Sbjct: 96  LFKDALIRECHVKIIEINLSKYVTVNSHGDVALSSNV 132


>UniRef50_A7JIZ6 Cluster: Predicted protein; n=3; Francisella
           tularensis subsp. novicida|Rep: Predicted protein -
           Francisella tularensis subsp. novicida GA99-3549
          Length = 557

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = -2

Query: 587 SKYINESRYNDVLFKNNVIRQTIR--RRIKINVSKYINEGRYNDVLFKNN 444
           SK++ ES +N+++    ++ + I   R +  N SK+ N   +N V FK+N
Sbjct: 223 SKFLQESYFNEIIKLGKLVFKNIEFHRDVSFNNSKFENITLFNSVTFKSN 272


>UniRef50_Q4UHA0 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 858

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 596 INVSKYINESRYNDVLFKNNVIRQTIRRRIKINVSKYINEGRY 468
           +N+++ I E   ND   K N+   TI+R    +V   INE RY
Sbjct: 88  VNINQNIEEQNINDDDKKKNIFVNTIKRLFNKDVENEINERRY 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,086,544
Number of Sequences: 1657284
Number of extensions: 6281321
Number of successful extensions: 20004
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19902
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)