Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120286.Seq
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 69 3e-12
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 60 2e-09
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 58 5e-09
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 56 2e-08
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 56 2e-08
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 56 4e-08
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 55 7e-08
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 54 2e-07
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 53 2e-07
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 50 1e-06
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022) 48 8e-06
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 48 1e-05
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 46 2e-05
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 43 3e-04
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 42 4e-04
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 40 0.003
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 39 0.004
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 37 0.019
SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067) 36 0.025
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 35 0.058
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_56788| Best HMM Match : 7tm_1 (HMM E-Value=4e-32) 30 2.2
SB_27229| Best HMM Match : 7tm_1 (HMM E-Value=0.0014) 30 2.2
SB_5194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_56284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_407| Best HMM Match : DnaJ (HMM E-Value=0.0039) 29 5.1
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_14156| Best HMM Match : Neuromodulin (HMM E-Value=1) 28 6.7
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.9
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +2
Query: 311 RQFTTSPQFCASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSK-DEASIKKFRAITEA 487
R + P ++Y+VLGV+PKA+Q+ IK AYYKLS HHPD+ + + + F+ I EA
Sbjct: 61 RCYANKPGSKKNYYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEA 120
Query: 488 YEVLGNIHLKK 520
Y VLGN+ +K
Sbjct: 121 YSVLGNLESRK 131
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +2
Query: 311 RQFTTSPQFCASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSK-DEASIKKFRAITEA 487
R + P ++Y+VLGV+PKA+Q+ IK AYYKLS HHPD+ + + + F+ I EA
Sbjct: 61 RCYANKPGSKKNYYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEA 120
Query: 488 YEVLGNIHLKK 520
Y VLGN+ +K
Sbjct: 121 YSVLGNLESRK 131
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 66.1 bits (154), Expect = 3e-11
Identities = 26/53 (49%), Positives = 42/53 (79%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
+Y +LGV P A Q +IK AY++L+K +HPD +KD+++ +KF+ ++EAYEVL +
Sbjct: 60 YYKILGVPPNANQKEIKKAYFELAKKYHPDTNKDKSASEKFQEVSEAYEVLSD 112
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 60.1 bits (139), Expect = 2e-09
Identities = 23/59 (38%), Positives = 40/59 (67%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIHLKK 520
+HYDV+ + P ATQ +IK+AYY+LS+++HPD + + ++F +T AY L + ++
Sbjct: 51 NHYDVMKLLPTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRR 109
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 60.1 bits (139), Expect = 2e-09
Identities = 23/59 (38%), Positives = 40/59 (67%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIHLKK 520
+HYDV+ + P ATQ +IK+AYY+LS+++HPD + + ++F +T AY L + ++
Sbjct: 198 NHYDVMKLLPTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRR 256
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
+YD+LG+T AT DIK Y KLS +HPDK+++ ++ KFR EAY+VL +
Sbjct: 5 YYDILGLTRSATDADIKKEYRKLSLKYHPDKNQEPSAEVKFRQAAEAYDVLSD 57
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
++YD+LGV A+ ++K AY K + +HPDK+KD + +KF+ I EAYEVL +
Sbjct: 4 NYYDILGVKKDASDQELKKAYKKQAFKYHPDKNKDPGAEEKFKEIAEAYEVLSD 57
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIHLKK 520
++YD+L V P AT +IK +Y KL+ +HPDK+ DE +F+ I++AYEVL + +K
Sbjct: 65 AYYDILNVPPTATATEIKKSYRKLALKYHPDKNPDEGD--RFKQISQAYEVLSDEKKRK 121
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
YD+LGV A+ NDIK AY KL+K HPDK+ D +KF+ IT AYE+L +
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTG--EKFKDITFAYEILSD 56
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
YD+LGV A+ NDIK AY KL+K HPDK+ D +KF+ IT AYE+L +
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTG--EKFKDITFAYEILSD 56
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/72 (36%), Positives = 40/72 (55%)
Frame = +2
Query: 290 ILVTTFYRQFTTSPQFCASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKF 469
+L T T +Y +LGV A+ IK A+ K++ +HPDK+K + + +KF
Sbjct: 8 VLTTAALSILATDLVMAKDYYQILGVPRNASDKQIKKAFRKMAVKYHPDKNKGKDAEEKF 67
Query: 470 RAITEAYEVLGN 505
R + EAYEVL +
Sbjct: 68 REVAEAYEVLSD 79
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/52 (44%), Positives = 38/52 (73%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVL 499
++Y +LGV A+ +DIK AY + + + HPDK+K+ + +KF+ I+EAY+VL
Sbjct: 4 NYYAILGVPRNASDDDIKKAYRRQALIFHPDKNKNSGAEEKFKEISEAYKVL 55
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
+Y VL V A+ +DIK AY K + +HPDK+K + +KF+ I+EAYEVL +
Sbjct: 5 YYAVLNVDKAASADDIKKAYRKQALKYHPDKNKSPGAEEKFKEISEAYEVLSD 57
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = +2
Query: 341 ASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDK---SKDEASIKKFRAITEAYEVLGN 505
A +YD+L V A++ DIK +Y KL+ HPDK +K+EA +KF+ I+EAYEVL +
Sbjct: 2 ADYYDILEVPRSASEQDIKKSYRKLALKWHPDKNPQNKEEAE-RKFKEISEAYEVLSD 58
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVLGNIHLKK 520
Y VLG+T ATQ +IK Y KL+ HPD+ +D E + K F I EAYE+L + K+
Sbjct: 796 YRVLGLTEDATQEEIKKRYKKLAMKWHPDRHRDNKEEAQKHFMEIQEAYEILSKLKTKR 854
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASI-KKFRAITEAYEVLGNIHLKK 520
Y +LGV A++N IK AY KL+ HPDK+KD+ +KF I AYEVL + +K
Sbjct: 27 YAILGVPRDASKNQIKRAYRKLAMKLHPDKNKDDPKAQEKFHDIGAAYEVLADDDQRK 84
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = +2
Query: 341 ASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVL 499
+++Y+VLGV AT +DI+ AY +L+ +HPD K+ + + F+ ++EAYEVL
Sbjct: 3 SNYYEVLGVERNATTDDIRRAYRRLALKYHPD--KNAGTEENFKEVSEAYEVL 53
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHP---DKSKDEASIKKFRAITEAYEVLGN 505
YDVLGV+ A++++IK AY K+S HP DK + E + +KF+A++++Y +L +
Sbjct: 17 YDVLGVSKTASESEIKRAYRKISLQVHPDRADKGEKEKATRKFQALSKSYCILSD 71
>SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)
Length = 118
Score = 48.0 bits (109), Expect = 8e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKF 469
HYDV+ + P AT +IK+AYY+LS+++HPD + + ++F
Sbjct: 76 HYDVMKLLPTATLREIKSAYYELSRIYHPDLNSSAEARERF 116
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDK--SKDEASIKKFRAITEAYEVLGN 505
+Y+VLGV A++ D+K AY + + HPDK + E + +KF+ ++EAYEVL +
Sbjct: 5 YYEVLGVPRSASEEDVKKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSD 59
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVLGN 505
HY+VLGV + +K Y KL+ HPDK+ D E S + FR I +AY+VL +
Sbjct: 5 HYEVLGVERDVDDSALKKTYRKLALKWHPDKNLDNAEESTRVFREIQQAYDVLSD 59
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVL 499
Y VLGV ATQ +I+ AY ++S HPD++K++ + KFR + EVL
Sbjct: 2485 YQVLGVETTATQAEIRRAYRRISLQLHPDRNKEDDAELKFRKLVAVAEVL 2534
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAIT 481
HY+ LG+ AT++DI AY KL+ + HPDKS S + F+A++
Sbjct: 144 HYERLGIQQGATKDDINRAYKKLAVLIHPDKSVAPGSEEAFKALS 188
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEA-SIKKFRAITEAYEVLGN 505
Y++L V A+Q +IK+A+ K +K HPD + D+ S K F ++EAY L +
Sbjct: 10 YEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSS 62
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEA-SIKKFRAITEAYEVLGN 505
Y++L V A+Q +IK+A+ K +K HPD + D+ S K F ++EAY L +
Sbjct: 71 YEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSS 123
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDK----SKDEASI--KKFRAITEAYEVLGNI 508
+Y +L ++ A++++IK AY K + HHPD+ S ++ I K+F+ + EAY +L +
Sbjct: 160 YYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSDP 219
Query: 509 HLKK 520
K+
Sbjct: 220 KKKR 223
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDK----SKDEASI--KKFRAITEAYEVLGNI 508
+Y +L ++ A++++IK AY K + HHPD+ S ++ I K+F+ + EAY +L +
Sbjct: 160 YYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSDP 219
Query: 509 HLKK 520
K+
Sbjct: 220 KKKR 223
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 41.1 bits (92), Expect = 9e-04
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 329 PQFCASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSK 445
P FC +Y++ G++ AT +I+ A+ KL+ HPDK+K
Sbjct: 23 PIFCEDYYELFGISRDATSKEIRKAFKKLALRLHPDKNK 61
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKK-FRAITEAYEVL 499
++YD LGV +T+ +I AY K + HPDK+ D + F +++A EVL
Sbjct: 7 NYYDTLGVHKDSTEKEILKAYRKKALKCHPDKNPDNPKASELFHKLSKALEVL 59
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDK 439
Y +LGV P+A+ +DIK Y KL+ + HPDK
Sbjct: 802 YSILGVPPEASDDDIKRQYRKLAVLIHPDK 831
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIH 511
Y VL + A+ +I+ Y LSK +HPDK + +KF I +AYE + + +
Sbjct: 1250 YAVLEIDRGASVAEIRRQYRSLSKKYHPDKETGDP--RKFMRIAKAYEAVSDFN 1301
>SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067)
Length = 29
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 356 VLGVTPKATQNDIKTAYYKLSKVHHPDK 439
+LGV P+A+ +DIK Y KL+ + HPDK
Sbjct: 2 ILGVPPEASDDDIKRQYRKLAVLIHPDK 29
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +2
Query: 353 DVLGVTPKATQNDIKTAYYKLSKVHHPDK--------SKDEASIKKFRAITEAYEVL 499
+VLGV P IK AY KL HHPDK E + +K + I +AYE++
Sbjct: 78 NVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELI 134
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDE---ASIKKFRAITEAYEVL 499
+Y +LG+ + +I AY KL+ HPD K E + K F I A EVL
Sbjct: 209 YYKILGLKRNCNKREITKAYRKLAVKWHPDNYKGEDKKKAEKMFIDIAAAKEVL 262
>SB_56788| Best HMM Match : 7tm_1 (HMM E-Value=4e-32)
Length = 524
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 555 YFSYGIQTRTRTYRSYPKVLQVPCNSQYHTHHGR 656
+F++ ++ R YR+ P+V VP ++ HT R
Sbjct: 26 FFAFSVKIHRRLYRNRPEVNWVPIHTNMHTREQR 59
>SB_27229| Best HMM Match : 7tm_1 (HMM E-Value=0.0014)
Length = 309
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 555 YFSYGIQTRTRTYRSYPKVLQVPCNSQYHTHHGR 656
+F++ ++ R YR+ P+V VP ++ HT R
Sbjct: 18 FFAFSVKIHRRLYRNRPEVNWVPIHTNMHTREQR 51
>SB_5194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 601 TLKFYKSHATRNITPTMDGKVPIYDFDSWSN 693
T+KF+ R ++ T DG + +D D+WS+
Sbjct: 95 TVKFFPFKDDRLMSTTSDGTITCWDLDNWSH 125
>SB_56284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 239 FLHGNQIYFLYINTCRV*CFCIEVLSY 159
++ GN+IY L +N C V F I ++SY
Sbjct: 165 YILGNKIYTLIVNVCIVVLFGITIVSY 191
>SB_407| Best HMM Match : DnaJ (HMM E-Value=0.0039)
Length = 106
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +2
Query: 383 QNDIKTAYYKLSKVHHPDKSKD 448
++ I+ AY++L++ +HPDK+ D
Sbjct: 83 ESKIRKAYFRLAQKYHPDKNPD 104
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 298 H*NIVSLTEHLQINSVCFRNFFTETKFTFYTSIP 197
H N L L+ +SVC R+ ++FTFY+S+P
Sbjct: 1509 HENDPILNTCLKPHSVCLRSREVFSRFTFYSSLP 1542
>SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1580
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 422 LWKVYSKPFLYRSGSLLV*LQAHHSGW 342
+WK+ + LY++GS +V +SGW
Sbjct: 303 VWKIITPKVLYKNGSAVVQWSHRYSGW 329
>SB_14156| Best HMM Match : Neuromodulin (HMM E-Value=1)
Length = 462
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 550 ENTSRMEYKPGPEPTDPTLKFYKSHATRNITPT 648
+ T+ Y PGP+ P+ SH T ++T T
Sbjct: 61 KQTTEARYAPGPDSPTPSQSTQSSHVTVHVTVT 93
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 576 TRTRTYRSYPKVLQVPCNSQYHTHHG 653
TRTR + YP Q P + HTH G
Sbjct: 3121 TRTRAFAPYPPHAQGPSHPISHTHKG 3146
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,977,222
Number of Sequences: 59808
Number of extensions: 488762
Number of successful extensions: 1161
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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