Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120286.Seq
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 59 4e-09
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 58 6e-09
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 54 8e-08
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 54 8e-08
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 53 2e-07
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 53 2e-07
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 48 9e-06
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 44 1e-04
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 43 3e-04
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 42 3e-04
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 41 0.001
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 40 0.001
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 39 0.003
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 37 0.013
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 37 0.013
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 37 0.013
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 32 0.36
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 32 0.36
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 32 0.36
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 32 0.36
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 32 0.36
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 32 0.36
U80438-2|AAB37632.1| 112|Caenorhabditis elegans Dnaj domain (pr... 31 1.1
AF025452-8|AAB70940.1| 324|Caenorhabditis elegans Serpentine re... 30 1.5
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 30 1.5
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 29 3.4
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 28 7.8
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPD---KSKDEASIKKFRAITEAYEVLGNIHLK 517
HY VLG+ A+Q DIK+AYYKLSK HHPD +K+EA+ KKF + AYE+L + +
Sbjct: 25 HYKVLGLAQSASQKDIKSAYYKLSKQHHPDTNPTNKEEAA-KKFHQVAMAYEILSSEDKR 83
Query: 518 K 520
K
Sbjct: 84 K 84
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIHLKK 520
+Y VLG++ AT ++IK AY K++ +HPDK+K+ + KF+ I EAY+VL + KK
Sbjct: 5 YYKVLGISKGATDDEIKKAYRKMALKYHPDKNKEAGAENKFKEIAEAYDVLSDDKKKK 62
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 58.0 bits (134), Expect = 6e-09
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
Y VLG++ +A+ +IK+AY L++ HPDK KDEA+ +F I EAYEVL +
Sbjct: 24 YKVLGISRRASAKEIKSAYKSLAREWHPDKRKDEAASGRFMEIAEAYEVLSD 75
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
+YDVLGV P A+ N++K AY K++ HPDK+ D A ++F+ I++AYEVL +
Sbjct: 7 YYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGA--EQFKQISQAYEVLSD 57
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVL 499
+HY+VLGV AT ++IK+A+Y SK HPD S +E++ F + AY+VL
Sbjct: 28 THYEVLGVESTATLSEIKSAFYAQSKKVHPDNSSEESATASFLELKNAYDVL 79
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
Y L V P A+Q DIK +Y+KL+K +HPDK+ D KF+ I+ AYEVL +
Sbjct: 15 YTTLNVRPDASQADIKKSYFKLAKEYHPDKNPDHGD--KFKEISFAYEVLSS 64
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
+Y LGV K+ IK AY++L+K +HPD +K + + KF+ I+EAYEVL +
Sbjct: 45 YYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSD 97
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
+Y LGV K+ IK AY++L+K +HPD +K + + KF+ I+EAYEVL +
Sbjct: 45 YYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSD 97
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSK-DEASIKKFRAITEAYEVLGN 505
Y +LGV A N IK AY KL+K HPD+++ DE + +KF+ ++ AYEVL +
Sbjct: 26 YKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSSAYEVLSD 78
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +2
Query: 299 TTFYRQFTTSPQFCASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAI 478
T+ ++ + C +Y++L + KA+ +DI+ Y KL+ HPDK + + + F+A+
Sbjct: 122 TSEQKELVERIRHCKDYYEILKIDKKASDDDIRKEYRKLALKLHPDKCRAPHATEAFKAL 181
Query: 479 TEAYEVLGN 505
AY VL +
Sbjct: 182 GNAYAVLSD 190
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/53 (37%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEA-SIKKFRAITEAYEVLGN 505
Y +LGV A++ +IK+AY KL+ +HPD++ ++A + ++F+ ++ AY VL +
Sbjct: 19 YQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEEFKKVSIAYSVLSD 71
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKS--KDEASIKKFRAITEAYEVLGNIHLKKC 523
Y+VLG+ AT ++IK AY KL+ +HPDK+ D + F+ I A VL N + ++
Sbjct: 40 YNVLGIQKNATDDEIKKAYRKLALRYHPDKNLDGDPEKTEMFKEINYANAVLSNPNKRRV 99
Query: 524 MIEV 535
E+
Sbjct: 100 YDEM 103
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVLGN 505
HY+VL V A + IK Y KL+ HPDK+ D E ++FR + AY+VL +
Sbjct: 29 HYEVLEVERDADDDKIKKNYRKLALKWHPDKNPDRIEECTQQFRLLQAAYDVLSD 83
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASI-KKFRAITEAYEVLGNIHLKK 520
+Y++LGV A I+ A+ KL+ HPD++ D+ + +F I +AYEVL + +L+K
Sbjct: 21 YYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPNAHDEFVKINKAYEVLKDENLRK 79
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD----EASIKKFRAITEAYEVL 499
S Y LG++ + +IK AY KL+ HPDK D E + +KF+ I +AYE+L
Sbjct: 7 SPYITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEIL 62
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDE----ASIKKFRAITEAYEVLGN 505
+Y +LGV A + +I AY K+++ HPD +DE + KKF I A EVL N
Sbjct: 381 YYKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKEVLSN 437
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +2
Query: 347 HYDVLGVTP---KATQNDIKTAYYKLSKVHHPDKSKDEASIKK----FRAITEAYEVLGN 505
HY VLG++ +AT ++I+ Y + HHPDK K + + F IT+AYE +G
Sbjct: 99 HYKVLGLSKLRWQATSDEIRFCYRQKVLKHHPDKKKHRGIVMEKEEYFTCITKAYEQVGM 158
Query: 506 IHLKK 520
+K+
Sbjct: 159 SDVKR 163
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 347 HYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDE----ASIKKFRAITEAYEVL 499
+Y +LGV A++ +I AY KL++ HPD DE + KKF I A EVL
Sbjct: 380 YYKILGVKRNASKREITKAYRKLAQKWHPDNFSDEEEKKKAEKKFIDIAAAKEVL 434
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 13/72 (18%)
Frame = +2
Query: 344 SHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSK-------------DEASIKKFRAITE 484
++Y+++GV+ AT+ +I+ A+ K +K HPD+S+ + ++F + E
Sbjct: 18 NYYEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLVKE 77
Query: 485 AYEVLGNIHLKK 520
AY+VL N +K
Sbjct: 78 AYDVLRNEEKRK 89
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKS----KD-EASIKKFRAITEAYEVLGNIHL 514
Y++LGV + +K YY+ S HPDKS +D + KF+ + +AY++L +
Sbjct: 16 YELLGVKKDCDEKALKKGYYRQSMRWHPDKSNLVEEDMQTYTTKFQLLNKAYQILSDEEK 75
Query: 515 KK 520
+K
Sbjct: 76 RK 77
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVL 499
Y +LG+ A + IK A+ +SK+HHPD+ D + F I +A++ L
Sbjct: 109 YQILGLDQGADEKAIKKAWRDMSKIHHPDRGGD---AQFFDKIAKAHQAL 155
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVL 499
Y +LG+ A + IK A+ +SK+HHPD+ D + F I +A++ L
Sbjct: 109 YQILGLDQGADEKAIKKAWRDMSKIHHPDRGGD---AQFFDKIAKAHQAL 155
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +2
Query: 350 YDVLGVTPKA-TQNDIKTAYYKLSKVHHPD--KSKDEASI--KKFRAITEAYEVL 499
YDVL V + + + AY L++ HHPD K+K+E + ++FR I AYE L
Sbjct: 38 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETL 92
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 392 IKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
I+ YYKL+ +HPDK+ + + F I AYE+L +
Sbjct: 1341 IRRQYYKLAAKYHPDKNPEGREM--FERINAAYELLSS 1376
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 392 IKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
I+ YYKL+ +HPDK+ + + F I AYE+L +
Sbjct: 1341 IRRQYYKLAAKYHPDKNPEGREM--FERINAAYELLSS 1376
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLG 502
Y V G+ + +DIK Y +L+ + PDK +A+ + + + A+ +G
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIG 712
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLG 502
Y V G+ + +DIK Y +L+ + PDK +A+ + + + A+ +G
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIG 712
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLG 502
Y V G+ + +DIK Y +L+ + PDK +A+ + + + A+ +G
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIG 712
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLG 502
Y V G+ + +DIK Y +L+ + PDK +A+ + + + A+ +G
Sbjct: 661 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIG 711
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 392 IKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 505
I+ YYKL+ +HPDK+ + + F I AYE+L +
Sbjct: 1341 IRRQYYKLAAKYHPDKNPEGREM--FERINAAYELLSS 1376
>U80438-2|AAB37632.1| 112|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 21 protein.
Length = 112
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 299 TTFYRQFTTSPQFCASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDK 439
+ +YR A +LGV P A IK A+ K+ V+HPD+
Sbjct: 44 SNYYRGGFDQKMSRAEAAKILGVAPSAKPAKIKEAHKKVMIVNHPDR 90
>AF025452-8|AAB70940.1| 324|Caenorhabditis elegans Serpentine
receptor, class i protein31 protein.
Length = 324
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 505 IPKYLICFCYCSKLFDRCFILRFVRVVYF--GKFIVSRFYIVLGRFWCDSKHIIVA 344
+P +LI Y S C L + ++ F GK RFY++ + WC + + +A
Sbjct: 9 VPWHLIYHYYISGTIAICLNLLVIYLILFHSGKLDNFRFYLLAFQIWCTASDVNIA 64
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 350 YDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVLGN-IHLKK 520
Y+VL + K Y KLS + HPDK+ D E + K F + +A + + + I L +
Sbjct: 43 YEVLQIDLDTDIEAAKKKYKKLSLLVHPDKNPDDRERADKAFDIVKKAIKQMEDPIELNR 102
Query: 521 C 523
C
Sbjct: 103 C 103
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 341 ASHYDVLGVTPKATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVL 499
A+ Y +L + T +I+ AY HPDK+ D E + ++F EA++ L
Sbjct: 7 ANPYKILHLEKGCTDKEIQKAYRAQCLKWHPDKNLDNKEEAERRFIEAKEAFDFL 61
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 314 QFTTSPQFCASHYDVLGVTPKATQNDI 394
QFTT P+ CA YD L + AT D+
Sbjct: 519 QFTTIPRSCAEAYDFLKLPNGATWVDV 545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,664,692
Number of Sequences: 27780
Number of extensions: 390320
Number of successful extensions: 1068
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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