Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120284.Seq
         (826 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D89663-1|BAA20906.1|  832|Drosophila melanogaster myosin light c...    32   0.83 
AE013599-2144|AAF58089.2|  929|Drosophila melanogaster CG18255-P...    32   0.83 
AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-P...    32   0.83 
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    32   0.83 
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    32   0.83 
D89661-1|BAA19488.1|  929|Drosophila melanogaster myosin light c...    31   1.4  
AE014296-3747|AAN12210.1|  170|Drosophila melanogaster CG11100-P...    30   4.4  
AF255668-1|AAG01795.1|  577|Drosophila melanogaster Stretchin-ML...    29   7.7  

>D89663-1|BAA20906.1|  832|Drosophila melanogaster myosin light
           chain kinase isoform-II protein.
          Length = 832

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 349 ICMQAEIKSLRLMRLK--RCTSSFLIMPSIRSRNESSGQSVE*CFLCIPESSAAHI 188
           IC+Q +       R+   R  +S L++P+IR  + SS  +   C L  PE   A I
Sbjct: 112 ICLQVKHPQAEFRRIPTTRTYTSLLVLPAIRGNSSSSSLAARSCILTRPEDCTALI 167


>AE013599-2144|AAF58089.2|  929|Drosophila melanogaster CG18255-PB,
           isoform B protein.
          Length = 929

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 349 ICMQAEIKSLRLMRLK--RCTSSFLIMPSIRSRNESSGQSVE*CFLCIPESSAAHI 188
           IC+Q +       R+   R  +S L++P+IR  + SS  +   C L  PE   A I
Sbjct: 28  ICLQVKHPQAEFRRIPTTRTYTSLLVLPAIRGNSSSSSLAARSCILTRPEDCTALI 83


>AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-PF,
           isoform F protein.
          Length = 1506

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 349 ICMQAEIKSLRLMRLK--RCTSSFLIMPSIRSRNESSGQSVE*CFLCIPESSAAHI 188
           IC+Q +       R+   R  +S L++P+IR  + SS  +   C L  PE   A I
Sbjct: 605 ICLQVKHPQAEFRRIPTTRTYTSLLVLPAIRGNSSSSSLAARSCILTRPEDCTALI 660


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 349  ICMQAEIKSLRLMRLK--RCTSSFLIMPSIRSRNESSGQSVE*CFLCIPESSAAHI 188
            IC+Q +       R+   R  +S L++P+IR  + SS  +   C L  PE   A I
Sbjct: 3562 ICLQVKHPQAEFRRIPTTRTYTSLLVLPAIRGNSSSSSLAARSCILTRPEDCTALI 3617


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 349  ICMQAEIKSLRLMRLK--RCTSSFLIMPSIRSRNESSGQSVE*CFLCIPESSAAHI 188
            IC+Q +       R+   R  +S L++P+IR  + SS  +   C L  PE   A I
Sbjct: 8369 ICLQVKHPQAEFRRIPTTRTYTSLLVLPAIRGNSSSSSLAARSCILTRPEDCTALI 8424


>D89661-1|BAA19488.1|  929|Drosophila melanogaster myosin light
           chain kinase  isoform-I protein.
          Length = 929

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 349 ICMQAEIKSLRLMRLK--RCTSSFLIMPSIRSRNESSGQSVE*CFLCIPESSAAHI 188
           IC+Q +       R+   R  +S L++P+IR  + SS  +   C L  PE   A I
Sbjct: 28  ICLQVKHPQAESRRIPTTRTYTSLLVLPAIRGNSSSSSLAARSCILTRPEDCTALI 83


>AE014296-3747|AAN12210.1|  170|Drosophila melanogaster CG11100-PA,
           isoform A protein.
          Length = 170

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 13/47 (27%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -1

Query: 394 LRISIVALGMYV*TLICMQAEIKSLRLMRLKRCT-SSFLIMPSIRSR 257
           +R ++ A+ +++ T +CM   +K +RL+ + RC   +FL   ++ +R
Sbjct: 102 VRFTLCAMYIHIRTYVCMYIWVKKVRLIEVLRCLYRAFLKYSTVETR 148


>AF255668-1|AAG01795.1|  577|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 301 RCTSSFLIMPSIRSRNESSGQSVE*CFLCIPESSAAHI 188
           R  +S L++P+IR  + SS  +   C L  PE   A I
Sbjct: 5   RTYTSLLVLPAIRGNSSSSSLAARSCILTRPEDCTALI 42


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,623,712
Number of Sequences: 53049
Number of extensions: 690811
Number of successful extensions: 1720
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)