Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120284.Seq
         (826 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g22940.1 68417.m03312 protein kinase family protein contains ...    29   2.8  
At5g33340.1 68418.m03957 aspartyl protease family protein contai...    28   6.5  
At3g24710.1 68416.m03102 hypothetical protein                          28   6.5  
At1g04350.1 68414.m00425 2-oxoglutarate-dependent dioxygenase, p...    28   6.5  
At1g80980.1 68414.m09503 expressed protein                             28   8.7  
At1g80700.1 68414.m09469 expressed protein                             28   8.7  

>At4g22940.1 68417.m03312 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 458

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 166 KLVSFNATLSNNILCIARQKLTMRALSHLNTTMIE 62
           K + F+   S +I CIAR+ + +R L H N   +E
Sbjct: 132 KRIRFDINNSESIKCIAREIIILRKLDHPNVIKLE 166


>At5g33340.1 68418.m03957 aspartyl protease family protein contains
           Pfam domain, PF00026: eukaryotic aspartyl protease
          Length = 437

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 25/87 (28%), Positives = 37/87 (42%)
 Frame = +3

Query: 423 CQYCHLEADVPSPDDHSVYRYLCVACGTLWLSTTRWTCLAKRRRASTNYLKCSASTPEGI 602
           C  C+ + D P  D  +   Y  V+C     S+++ T L  +   STN   CS S   G 
Sbjct: 121 CDDCYTQVD-PLFDPKTSSTYKDVSC-----SSSQCTALENQASCSTNDNTCSYSLSYGD 174

Query: 603 CSNTTTSCSQFVLRFRRISTRSL*IKN 683
            S T  + +   L      TR + +KN
Sbjct: 175 NSYTKGNIAVDTLTLGSSDTRPMQLKN 201


>At3g24710.1 68416.m03102 hypothetical protein
          Length = 126

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 685 AQVKIGKFKFGEDTFTLRYVLGGEQPSDLWPGTLQTN*NLKTPKK 819
           AQ ++      E    ++Y+  G +P+D+W      N N+K+ K+
Sbjct: 57  AQSQLPSCVMYESKIKIKYIAVGNEPTDIWRTDGDKNANVKSAKR 101


>At1g04350.1 68414.m00425 2-oxoglutarate-dependent dioxygenase,
           putative Similar to Arabidopsis 2A6 (gb|X83096) and to
           tomato ethylene synthesis regulatory protein E8
           (SP|P10967); EST gb|T76913 comes from this gene
          Length = 360

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/75 (22%), Positives = 37/75 (49%)
 Frame = +3

Query: 243 PLDSLRDLIDGMIKNEDVQRFNRINRNDLISACMQINVQTYMPNATIDMRKQPNCIYFRI 422
           PL+ L+++ DG      V+RF+        +   +   + ++ N+  D+    +C+ +R 
Sbjct: 95  PLNVLQEIQDG------VRRFHEEAPEVKKTYFTRDATKRFVYNSNFDLYSSSSCVNWRD 148

Query: 423 CQYCHLEADVPSPDD 467
              C++  D P+P+D
Sbjct: 149 SFACYMAPDPPNPED 163


>At1g80980.1 68414.m09503 expressed protein
          Length = 214

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -3

Query: 674 LQTTRRDSTKAQNKLRTTSSGVATNS 597
           L  TRR  TK +NKL  T S VA +S
Sbjct: 17  LYRTRRFCTKGENKLEKTESSVAHHS 42


>At1g80700.1 68414.m09469 expressed protein
          Length = 214

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -3

Query: 674 LQTTRRDSTKAQNKLRTTSSGVATNS 597
           L  TRR  TK +NKL  T S VA +S
Sbjct: 17  LYRTRRFCTKGENKLEKTESSVAHHS 42


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,881,195
Number of Sequences: 28952
Number of extensions: 313388
Number of successful extensions: 771
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)