Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120279.Seq
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...   153   6e-39
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...   153   6e-39
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...   153   6e-39
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          30   0.071
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.7  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   8.1  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score =  153 bits (371), Expect = 6e-39
 Identities = 73/87 (83%), Positives = 79/87 (90%)
 Frame = +2

Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
           AAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD FVRIPKEQG+ +FWRGN ANV
Sbjct: 21  AAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAFWRGNLANV 80

Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTR 517
           IRYFPTQALNFAFKD YKQVFLGG+ +
Sbjct: 81  IRYFPTQALNFAFKDVYKQVFLGGVDK 107



 Score =  125 bits (301), Expect = 2e-30
 Identities = 58/84 (69%), Positives = 63/84 (75%)
 Frame = +1

Query: 511 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 690
           DK TQFWRYF            TSLCFVYPLDFARTRL ADVG G G+REF+GL +C+ K
Sbjct: 106 DKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKK 165

Query: 691 IFKSDGLIGLYRGFGVSVQGIIIY 762
             KSDG+IGLYRGF VSVQGIIIY
Sbjct: 166 TVKSDGIIGLYRGFNVSVQGIIIY 189



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 22/69 (31%), Positives = 39/69 (56%)
 Frame = +2

Query: 284 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 463
           P + V+  + +Q  S    ++  YK  +D +V+I K++G  +F++G F+NV+R     AL
Sbjct: 232 PFDTVRRRMMMQ--SWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288

Query: 464 NFAFKDKYK 490
              F D+ K
Sbjct: 289 VLVFYDEVK 297



 Score = 32.7 bits (71), Expect = 0.013
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +3

Query: 198 MSNLADPVAFAKDFLAGGI 254
           M+  ADP  FAKDFLAGGI
Sbjct: 1   MTKKADPYGFAKDFLAGGI 19


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score =  153 bits (371), Expect = 6e-39
 Identities = 73/87 (83%), Positives = 79/87 (90%)
 Frame = +2

Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
           AAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD FVRIPKEQG+ +FWRGN ANV
Sbjct: 21  AAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAFWRGNLANV 80

Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTR 517
           IRYFPTQALNFAFKD YKQVFLGG+ +
Sbjct: 81  IRYFPTQALNFAFKDVYKQVFLGGVDK 107



 Score =  125 bits (301), Expect = 2e-30
 Identities = 58/84 (69%), Positives = 63/84 (75%)
 Frame = +1

Query: 511 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 690
           DK TQFWRYF            TSLCFVYPLDFARTRL ADVG G G+REF+GL +C+ K
Sbjct: 106 DKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKK 165

Query: 691 IFKSDGLIGLYRGFGVSVQGIIIY 762
             KSDG+IGLYRGF VSVQGIIIY
Sbjct: 166 TVKSDGIIGLYRGFNVSVQGIIIY 189



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 22/69 (31%), Positives = 39/69 (56%)
 Frame = +2

Query: 284 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 463
           P + V+  + +Q  S    ++  YK  +D +V+I K++G  +F++G F+NV+R     AL
Sbjct: 232 PFDTVRRRMMMQ--SWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288

Query: 464 NFAFKDKYK 490
              F D+ K
Sbjct: 289 VLVFYDEVK 297



 Score = 32.7 bits (71), Expect = 0.013
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +3

Query: 198 MSNLADPVAFAKDFLAGGI 254
           M+  ADP  FAKDFLAGGI
Sbjct: 1   MTKKADPYGFAKDFLAGGI 19


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score =  153 bits (371), Expect = 6e-39
 Identities = 73/87 (83%), Positives = 79/87 (90%)
 Frame = +2

Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
           AAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD FVRIPKEQG+ +FWRGN ANV
Sbjct: 21  AAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAFWRGNLANV 80

Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTR 517
           IRYFPTQALNFAFKD YKQVFLGG+ +
Sbjct: 81  IRYFPTQALNFAFKDVYKQVFLGGVDK 107



 Score =  126 bits (304), Expect = 8e-31
 Identities = 58/84 (69%), Positives = 64/84 (76%)
 Frame = +1

Query: 511 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 690
           DK TQFWRYF            TSLCFVYPLDFARTRL ADVG+G G+REF+GL +C+ K
Sbjct: 106 DKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDCLKK 165

Query: 691 IFKSDGLIGLYRGFGVSVQGIIIY 762
             KSDG+IGLYRGF VSVQGIIIY
Sbjct: 166 TVKSDGIIGLYRGFNVSVQGIIIY 189



 Score = 36.7 bits (81), Expect = 8e-04
 Identities = 22/69 (31%), Positives = 40/69 (57%)
 Frame = +2

Query: 284 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 463
           P + V+  + +Q  S +  ++  YK  +D +V+I K++G  +F++G F+NV+R     AL
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288

Query: 464 NFAFKDKYK 490
              F D+ K
Sbjct: 289 VLVFYDEVK 297



 Score = 32.7 bits (71), Expect = 0.013
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +3

Query: 198 MSNLADPVAFAKDFLAGGI 254
           M+  ADP  FAKDFLAGGI
Sbjct: 1   MTKKADPYGFAKDFLAGGI 19


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 0.071
 Identities = 26/68 (38%), Positives = 34/68 (50%)
 Frame = +1

Query: 178 RSHNRTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHRACQAAAPSTARQQADRRRPALQ 357
           +S +R+K RTS  RSRS RT   A    R +  R T    + AA + A +   RRR   +
Sbjct: 444 QSRSRSKTRTS--RSRS-RTPLPARGHVRARLTRRTIPPTRVAAAAAAPEGRRRRRAIAR 500

Query: 358 GYRRCLRP 381
             RR  RP
Sbjct: 501 ARRRRCRP 508


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 589 STERWLRRHHRRPDYQRSNARTASSCQ 509
           + +RWLR HH    + ++     SS Q
Sbjct: 698 AVDRWLREHHLELAHAKTEMTVISSLQ 724


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 30  EFQKRHTPTLCAPVITKLLQ 89
           EFQ+R TP +   +++K+ Q
Sbjct: 350 EFQRRLTPAMIGELVSKMTQ 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,549
Number of Sequences: 2352
Number of extensions: 16131
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)